Vigun09g152200.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.962e-13 Identity = 55/173 (31.79%), Postives = 77/173 (44.51%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPD------LEDITQLLTTIDIY---------------------------------------ISAENKVSGEMDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQ 387
ME NKDEA R IA + + A +F KAQ LYP +E + Q + + ++A +V D+Y ILGVS A +E ++K YRKLAL HPDKN + GA AFK + A+++LS+ KR +Y+Q
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPERALRFLEKAQRLYPTPRVSALIESLNQKPQSTGDHPQPTDTTHTTTKKAGGTETPSANGEAGGGESAKGYTSEQVAAVKRVKQCKDYYEILGVSRSASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQ 173
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB14_XENLA (DnaJ homolog subfamily B member 14 OS=Xenopus laevis OX=8355 GN=dnajb14 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.266e-13 Identity = 61/196 (31.12%), Postives = 86/196 (43.88%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQL-----------------LTTIDIYISAENKVSGEM-------------------DWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTSN-----HVGSKSDAPSSNGF 468
ME N+DEA R I + + A++F KA+ LYP E L ++ AE SG+ +Y +LGVSP A EE ++K YRKLAL HPDKN + GA AFK + A+++LS+ KR +Y+ S Q+N N H G ++D + F
Sbjct: 1 MESNRDEAERCVRIGKAAIEAGDKEKARRFFSKAERLYPSSEARVLLDALEKNDTAGNGPQSEKMSKSTEQPKAEKDSSGDTGKGHTQDQVDGVQRIKKCKTYYEVLGVSPDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDNVQNNHRNGGFDYHRGFEADITPEDLF 196
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB12_HUMAN (DnaJ homolog subfamily B member 12 OS=Homo sapiens OX=9606 GN=DNAJB12 PE=1 SV=5) HSP 1 Score: 73.9442 bits (180), Expect = 9.680e-13 Identity = 55/172 (31.98%), Postives = 76/172 (44.19%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPD------LEDITQLLTTIDIY--------------------------------------ISAENKVSGEMDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQ 387
ME NKDEA R IA + + A +F KAQ LYP +E + Q T ++A +V D+Y ILGVS A +E ++K YR+LAL HPDKN + GA AFK + A+++LS+ KR +Y+Q
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQPPPTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQ 172
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DNJ49_ARATH (Chaperone protein dnaJ 49 OS=Arabidopsis thaliana OX=3702 GN=ATJ49 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.973e-12 Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIY--ISAENKVS---------------GEM-----------------DWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQH 414
M+ NKD+A R IAE + A KF A+ L P L + +L+ D +S + VS G+M D+Y ILG+ + +RK YRKL+L +HPDKNK+ G+E AFK VS+A++ LSD R +++Q + F H
Sbjct: 1 MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLS-VDELVAACDNLDSVSRNSSVSEKLKTMDGDDDKLETGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDH 170
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB14_XENTR (DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis OX=8364 GN=dnajb14 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.062e-12 Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIYISAEN-------------------------------KVSGEMD----------WYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTSN-----HVGSKSDAPSSNGF 468
ME N+DEA R IA+ + AK+F KA+ LYP E LL + +A N ++D +Y +LGVS A EE ++K YRKLAL HPDKN + GA AFK + A+++LS+ KR +Y+ S Q+N N H G ++D + F
Sbjct: 1 MESNRDEAERCVRIAKAAIEAGDKEKAKRFLSKAERLYPSSE-ARALLQAFEKNDTAGNGPQSAKMAKGTEQPKAEKDSNASASSDTGKGHTQDQLDGVQRIKKCKTYYEVLGVSTDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDQMQNNHRNGGFDYHRGFEADITPEDLF 200
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB12_BOVIN (DnaJ homolog subfamily B member 12 OS=Bos taurus OX=9913 GN=DNAJB12 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.137e-12 Identity = 56/178 (31.46%), Postives = 77/178 (43.26%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLY--PDLEDITQLLTT------------------------------------------IDIYISAENKVSGEMDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKG 405
ME NKDEA R IA + + A +F KAQ LY P + + + L ++A +V D+Y ILGVS A +E ++K YRKLAL HPDKN + GA AFK + A+++LS+ KR +Y+Q KG
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQPAGDQPQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKG 178
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DNAJ_METTE (Chaperone protein DnaJ OS=Methanosarcina thermophila OX=2210 GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.815e-12 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 199 DWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQ 387
D+Y ILG+S A E ++K YRKLAL HPD+NK GAE FK +SEA+++LSD KR +Y++
Sbjct: 6 DYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDR 68
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DJB14_MOUSE (DnaJ homolog subfamily B member 14 OS=Mus musculus OX=10090 GN=Dnajb14 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.185e-11 Identity = 59/211 (27.96%), Postives = 92/211 (43.60%), Query Frame = 1 Query: 4 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTI---------------------------------------DIYISAENKVSGEM------DWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTSNHVGSKSDAPSSNGFYNLKKNVTSNV 501
ME N+DEA + +IA S A++F KA+ LYP L LL I +Y +++V G + ++Y +LGV+ A +E ++K YRKLAL HPDKN + GA AFK + A+++LS+ KR +Y+ L G + NH +NG +N + +++
Sbjct: 1 MEGNRDEAEKCVQIAREALSAGNRDKAQRFLQKAEKLYP-LPAARALLEIIMKNGSTAGSSTHCRKPPGSSDQSKPSCGKDGTSGAGEGGKVY--TKDQVEGVLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYD----LTGSEEQACNH--------QNNGRFNFHRGCEADI 196
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DNAJ_DEIRA (Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=dnaJ PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.216e-11 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 196 MDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKG 405
MD+Y +LGVS A + ++ YRKLAL LHPD+NK GA F VSEA+S+LSD KR Y++ S G
Sbjct: 1 MDYYELLGVSRTASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRAHYDRFGSAPG 70
BLAST of Vigun09g152200.1 vs. DB:Swiss
Match: DNAJ_METMZ (Chaperone protein DnaJ OS=Methanosarcina mazei OX=2209 GN=dnaJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.225e-11 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 199 DWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQ 387
D+Y ILG+S + E ++K YRKLAL HPD+NK GAE FK +SEA+++LSD KR +Y++
Sbjct: 6 DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDR 68 The following BLAST results are available for this feature:
BLAST of Vigun09g152200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g152200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g152200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g152200.1; organism=Vigna unguiculata; type=mRNA; length=3010bpback to top protein sequence of Vigun09g152200.1_Vu_IT97K-499-35_v1.1 >Vigun09g152200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g152200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g152200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=689bpback to top mRNA from alignment at Vu09:31654694..31659426+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g152200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g152200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g152200.1; organism=Vigna unguiculata; type=mRNA; length=4733bp; location=Sequence derived from: Vu09:31654694..31659426+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:31654694..31659426+ >Vigun09g152200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g152200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g152200.1; organism=Vigna unguiculata; type=CDS; length=2067bp; location=Sequence derived from: Vu09:31654694..31659426+ (Vigna unguiculataback to top |