Vigun09g154400.1

Transcript Overview
NameVigun09g154400.1
Unique NameVigun09g154400.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1830
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:31986621..31988450 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL493Pisum sativum Cameor genome v1aPisum sativum
psvuL521Pisum sativum Cameor genome v1aPisum sativum
psvuL647Pisum sativum Cameor genome v1aPisum sativum
crvuL569Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL802Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0635Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL443Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0257Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0399Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0944Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1210Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0323Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0646Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0771Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL726Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR673Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR695Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL313Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL290Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL466Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL440Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL466Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL407Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL584Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL320Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL411Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL334Cicer arietinum
carvuL419Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL440Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR771Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR827Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL140Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL708Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.2g127000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan04g163800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr09.2132Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g103400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.02G150300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_012544Cajanus cajan Asha genome v1.0Cajanus cajan
jg54442.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G136400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_03941Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat5g080440.1Pisum sativum Cameor genome v1aPisum sativum
Cr_12226.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004502541.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_14081Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va04G052100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr09.1000835Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G111400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_06403.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_18258Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13982.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058925488.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_02G01220.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g154400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g154400Vigun09g154400_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g154400.1Vigun09g154400.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g154400.1_Vu_IT97K-499-35_v1.1Vigun09g154400.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g154400.1.v1.1.five_prime_UTR.1Vigun09g154400.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g154400.1.v1.1.CDS.1Vigun09g154400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g154400.1.v1.1.three_prime_UTR.1Vigun09g154400.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.493e-45
Identity = 74/109 (67.89%), Postives = 87/109 (79.82%), Query Frame = 1 
Query:   88 WKPNI----EVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSRHNQTQRSFTSHQTHPNNNASREIDMALVFAKFLNPK 402
            W+PN     E+ P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGGGCRK+RR KSSS +N T+ S T++  +P    S  ID+ALV+A FLNPK
Sbjct:   13 WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGNN-TKTSLTANSGNP-GGGSPSIDLALVYANFLNPK 119
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.207e-40
Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 1 
Query:   49 HHHFPTP-MEQRSRWKPNIE----VAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSRHNQTQRSFTSHQTHPNNNASR-----------EIDMALVFAKFLNPKQNVGEDNNASSSSNNYFTPDT 465
             H FP P ME   +WK + E     AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+PVGGGCRK    +S SR N  +R F  ++  P+   ++           +ID+A VFA+++  +     DN   S  ++  T  T
Sbjct:   12 QHQFPLPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRK----RSRSRQNSHKR-FGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRSPSSTDNTTGSDQDSPITTTT 161
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.361e-34
Identity = 69/129 (53.49%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:   61 PTPMEQRSRWKPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSS-----------SRHNQTQRSFTSHQTHPNNNASREIDMALVFAKFLNPKQNVG 414
            P+P    +R +P  E+A  CPRC STNTKFCYYNNYSL+QPRYFCK+CRRYWTKGG+LRN+PVGGGCRKN+R+ SS           + H+    S      + NN     ID++L FA  LN KQ+ G
Sbjct:   39 PSPATAVTRPQP-PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNN---EHIDLSLAFA-LLN-KQHPG 161
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.915e-32
Identity = 59/104 (56.73%), Postives = 67/104 (64.42%), Query Frame = 1 
Query:  109 APNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSRHNQTQRSFTSHQTHPNNN------------ASREIDMALVFA 384
            A NCPRC S NTKFCYYNNYSLSQPRYFCK+CRRYWTKGG+LRNVPVGGGCR+N+R+ SS+          +  T P  N                ID+ L FA
Sbjct:   47 AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFA 150
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.295e-30
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 1 
Query:   70 MEQRSRWK--PNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSR 294
            M +R+R    P  E A NCPRC STNTKFCY+NNYSL+QPR+FCK CRRYWT+GGSLRNVPVGGG R+N+R+KS S+
Sbjct:   60 MVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRSKSRSK 136
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.136e-30
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 1 
Query:   91 KPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRA 279
            +P +  A  CPRC S NTKFCYYNNYS+SQPRYFCKACRRYWT GG+LRNVP+GGGCRKN+ A
Sbjct:   53 RPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHA 115
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.000e-30
Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 1 
Query:   61 PTPMEQRSRWKPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSRHNQTQ---------RSF-TSHQTHPNNNASREIDMALVFAKFLNPKQNVG 414
            P P EQ  R          CPRC STNTKFCYYNNYSLSQPRYFCK+CRRYWTKGG LRN+P+GG  RK++R+ S+++  +T          +SF T+   + NNN S E  M L  A  L  KQ +G
Sbjct:   33 PAPPEQSLR----------CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGKSFPTASFGYNNNNISNE-QMELGLAYALLNKQPLG 149
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 4.583e-30
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 1 
Query:   91 KPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRR 276
            +P  + A NCPRC STNTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVGGG RKN+R
Sbjct:   46 RPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR 107
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 6.065e-30
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:  103 EVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAK 282
            E A  CPRC STNTKFCY+NNYSL+QPR+FCK CRRYWT+GG+LRNVPVGGGCR+NRR K
Sbjct:   86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
[Close]
BLAST of Vigun09g154400.1 vs. DB:Swiss
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.465e-29
Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 1 
Query:   70 MEQRSRWKPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKS 285
            ME R + +P  +V  NCPRC STNTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRNVPVGG  RKN+R+ +
Sbjct:   63 METR-KARPQEKV--NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSST 131
The following BLAST results are available for this feature:
BLAST of Vigun09g154400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
DOF35_ARATH2.493e-4567.89Dof zinc finger protein DOF3.5 OS=Arabidopsis thal... [more]
DOF12_ARATH5.207e-4049.03Dof zinc finger protein DOF1.2 OS=Arabidopsis thal... [more]
DOF53_ARATH5.361e-3453.49Dof zinc finger protein DOF5.3 OS=Arabidopsis thal... [more]
DOF21_ARATH3.915e-3256.73Dof zinc finger protein DOF2.1 OS=Arabidopsis thal... [more]
DOF36_ARATH1.295e-3070.13Dof zinc finger protein DOF3.6 OS=Arabidopsis thal... [more]
PBF_MAIZE3.136e-3076.19Dof zinc finger protein PBF OS=Zea mays OX=4577 GN... [more]
DOF32_ARATH4.000e-3051.56Dof zinc finger protein DOF3.2 OS=Arabidopsis thal... [more]
DOF46_ARATH4.583e-3079.03Dof zinc finger protein DOF4.6 OS=Arabidopsis thal... [more]
DOF24_ARATH6.065e-3080.00Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
DOF37_ARATH2.465e-2972.22Dof zinc finger protein DOF3.7 OS=Arabidopsis thal... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 38..92
e-value: 2.0E-32
score: 111.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 40..76
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 38..92
score: 28.77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..116

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g154400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g154400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g154400.1; organism=Vigna unguiculata; type=mRNA; length=1830bp
CCTGCTCTGCATCCAGTACACTGCATTGTTTCACACATTAATAATTTATA
TATCTATTTGGTAATGCAGAACTACCTGAATTTAACCCTGCCTCTGGAAC
TACATCATCAAATCAATATTGAACTTTCCTTAAACACATAAAACGTCTCT
GATTCTCAAACTAGTGTGGGTCAATTCATAGTTTTAAGCTGGATGATGAT
TTTTGGGCACGCGGCTTGTTAAAGAATGAGTGGAGAAGCAAGTGTTTGAC
TTATGAAGCTGAATCAGTATCAGAAAGTAAGGGCAATGAAGAAAAATCCA
GTGTCGAAGGAGACACGCCCCATCCGCCTATGAAACAGCACAGCATAACA
TGAAATTGACATCAACATCAAAGACTCACACAAACACATGCACACCCTTC
CTTAATTTTAACGATTCCCCAACCGCCCACGTTCCTCCCAACGCTTCCAC
CACACATATATTCACACACACCAACAAATCCCTCTCCAATCTCACTCTCA
CTCCATCCCCACCCACCCTTCTTATATCACACCTCTCCCAAATAAATGTT
CCCACATACCCTTATTACCGCGGCTGCCCTTCAACGCATGTTGCATCATC
ACTTTCCCACCCCAATGGAACAACGTTCGAGGTGGAAACCCAACATCGAG
GTCGCGCCCAATTGTCCTCGTTGCGCTTCCACCAACACCAAATTCTGTTA
CTACAACAACTACAGCTTGTCGCAGCCCCGCTATTTCTGCAAAGCCTGCA
GACGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCGGCGGC
GGCTGCCGCAAGAACCGCCGCGCCAAGTCCTCCTCGCGCCACAACCAAAC
CCAACGCTCTTTCACCTCTCATCAAACCCATCCAAACAACAACGCCTCTC
GTGAAATAGACATGGCCCTTGTCTTCGCCAAATTCTTGAACCCCAAACAA
AACGTTGGAGAGGATAACAATGCCTCCTCTTCTTCCAACAATTACTTCAC
ACCCGACACCGTTCAAACCGAGAATGATACTGCAGTTGTTCAGTCGCCGA
ACAAGGGTTTGTCGTCGGATCCTGCCATTGTTGAATCCGACTCCGACGCG
GTGGTGGCAATTGAGAATTTCGGTGGGGAGGAATTGAGTTTGGGTGAGAT
TGACGACTTGGAGAGGCTTCTGGGTGTGTGTGGTGATGAAGACGGTCTCT
GGTGTGATGCTACCTTGTCCTCTTCCGTTACTTGGGAACCACCCGTGAAG
GAATTGGAATGCTCGATGCCGTTGAGTGAAAACGATGCCCAATTATTACC
CATCACTTCTGCTTCTTCTACCGTGCATTCAATGAGTGACACTTGCTGGA
GCAGTTGGGGTTCCTTAGATCTTTCAGCCATGGAAGTGTTCTCATCAACT
CCTTGATCAATTCGATCTGATGATTTTACATGAACTTCATAAGATCTGAT
CTTCTTCTTATTATTTGAAAAGAAGAGAAGAAGCAGAGAGAGTTAATTAA
TTACGCTACGAATACCTCACATGTGTTCCTATATTTCTAAAAAGGTAGAA
TCTTATAGAAATTGTTTGTGTTTAGTGGATGTAGAATAAAGTTGTATTTG
GGGTCGTGGAAATGCAGTTGAGAAAGCTATATATACCCTCGGATCTGAAA
CTCGGTTCACGCAGCCCATCTGTACCTTTTGGAATATATACATACTAATC
ATATAGATACTATAAACTTGAATTTTCTATGCAATCTCTTCACTCTTCAT
ATCATACATTAATTCTTGTAGCCGTTGATTTCAGTCAAAGTTTTATAGTT
ACATCTCAATCTAATATGTATTCAACACGA
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protein sequence of Vigun09g154400.1_Vu_IT97K-499-35_v1.1

>Vigun09g154400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g154400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g154400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=287bp
MFPHTLITAAALQRMLHHHFPTPMEQRSRWKPNIEVAPNCPRCASTNTKF
CYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRAKSSSRHN
QTQRSFTSHQTHPNNNASREIDMALVFAKFLNPKQNVGEDNNASSSSNNY
FTPDTVQTENDTAVVQSPNKGLSSDPAIVESDSDAVVAIENFGGEELSLG
EIDDLERLLGVCGDEDGLWCDATLSSSVTWEPPVKELECSMPLSENDAQL
LPITSASSTVHSMSDTCWSSWGSLDLSAMEVFSSTP*
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mRNA from alignment at Vu09:31986621..31988450+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g154400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g154400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g154400.1; organism=Vigna unguiculata; type=mRNA; length=1830bp; location=Sequence derived from: Vu09:31986621..31988450+ (Vigna unguiculata
CCTGCTCTGCATCCAGTACACTGCATTGTTTCACACATTAATAATTTATA
TATCTATTTGGTAATGCAGAACTACCTGAATTTAACCCTGCCTCTGGAAC
TACATCATCAAATCAATATTGAACTTTCCTTAAACACATAAAACGTCTCT
GATTCTCAAACTAGTGTGGGTCAATTCATAGTTTTAAGCTGGATGATGAT
TTTTGGGCACGCGGCTTGTTAAAGAATGAGTGGAGAAGCAAGTGTTTGAC
TTATGAAGCTGAATCAGTATCAGAAAGTAAGGGCAATGAAGAAAAATCCA
GTGTCGAAGGAGACACGCCCCATCCGCCTATGAAACAGCACAGCATAACA
TGAAATTGACATCAACATCAAAGACTCACACAAACACATGCACACCCTTC
CTTAATTTTAACGATTCCCCAACCGCCCACGTTCCTCCCAACGCTTCCAC
CACACATATATTCACACACACCAACAAATCCCTCTCCAATCTCACTCTCA
CTCCATCCCCACCCACCCTTCTTATATCACACCTCTCCCAAATAAATGTT
CCCACATACCCTTATTACCGCGGCTGCCCTTCAACGCATGTTGCATCATC
ACTTTCCCACCCCAATGGAACAACGTTCGAGGTGGAAACCCAACATCGAG
GTCGCGCCCAATTGTCCTCGTTGCGCTTCCACCAACACCAAATTCTGTTA
CTACAACAACTACAGCTTGTCGCAGCCCCGCTATTTCTGCAAAGCCTGCA
GACGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCGGCGGC
GGCTGCCGCAAGAACCGCCGCGCCAAGTCCTCCTCGCGCCACAACCAAAC
CCAACGCTCTTTCACCTCTCATCAAACCCATCCAAACAACAACGCCTCTC
GTGAAATAGACATGGCCCTTGTCTTCGCCAAATTCTTGAACCCCAAACAA
AACGTTGGAGAGGATAACAATGCCTCCTCTTCTTCCAACAATTACTTCAC
ACCCGACACCGTTCAAACCGAGAATGATACTGCAGTTGTTCAGTCGCCGA
ACAAGGGTTTGTCGTCGGATCCTGCCATTGTTGAATCCGACTCCGACGCG
GTGGTGGCAATTGAGAATTTCGGTGGGGAGGAATTGAGTTTGGGTGAGAT
TGACGACTTGGAGAGGCTTCTGGGTGTGTGTGGTGATGAAGACGGTCTCT
GGTGTGATGCTACCTTGTCCTCTTCCGTTACTTGGGAACCACCCGTGAAG
GAATTGGAATGCTCGATGCCGTTGAGTGAAAACGATGCCCAATTATTACC
CATCACTTCTGCTTCTTCTACCGTGCATTCAATGAGTGACACTTGCTGGA
GCAGTTGGGGTTCCTTAGATCTTTCAGCCATGGAAGTGTTCTCATCAACT
CCTTGATCAATTCGATCTGATGATTTTACATGAACTTCATAAGATCTGAT
CTTCTTCTTATTATTTGAAAAGAAGAGAAGAAGCAGAGAGAGTTAATTAA
TTACGCTACGAATACCTCACATGTGTTCCTATATTTCTAAAAAGGTAGAA
TCTTATAGAAATTGTTTGTGTTTAGTGGATGTAGAATAAAGTTGTATTTG
GGGTCGTGGAAATGCAGTTGAGAAAGCTATATATACCCTCGGATCTGAAA
CTCGGTTCACGCAGCCCATCTGTACCTTTTGGAATATATACATACTAATC
ATATAGATACTATAAACTTGAATTTTCTATGCAATCTCTTCACTCTTCAT
ATCATACATTAATTCTTGTAGCCGTTGATTTCAGTCAAAGTTTTATAGTT
ACATCTCAATCTAATATGTATTCAACACGA
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Coding sequence (CDS) from alignment at Vu09:31986621..31988450+

>Vigun09g154400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g154400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g154400.1; organism=Vigna unguiculata; type=CDS; length=861bp; location=Sequence derived from: Vu09:31986621..31988450+ (Vigna unguiculata
ATGTTCCCACATACCCTTATTACCGCGGCTGCCCTTCAACGCATGTTGCA
TCATCACTTTCCCACCCCAATGGAACAACGTTCGAGGTGGAAACCCAACA
TCGAGGTCGCGCCCAATTGTCCTCGTTGCGCTTCCACCAACACCAAATTC
TGTTACTACAACAACTACAGCTTGTCGCAGCCCCGCTATTTCTGCAAAGC
CTGCAGACGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCG
GCGGCGGCTGCCGCAAGAACCGCCGCGCCAAGTCCTCCTCGCGCCACAAC
CAAACCCAACGCTCTTTCACCTCTCATCAAACCCATCCAAACAACAACGC
CTCTCGTGAAATAGACATGGCCCTTGTCTTCGCCAAATTCTTGAACCCCA
AACAAAACGTTGGAGAGGATAACAATGCCTCCTCTTCTTCCAACAATTAC
TTCACACCCGACACCGTTCAAACCGAGAATGATACTGCAGTTGTTCAGTC
GCCGAACAAGGGTTTGTCGTCGGATCCTGCCATTGTTGAATCCGACTCCG
ACGCGGTGGTGGCAATTGAGAATTTCGGTGGGGAGGAATTGAGTTTGGGT
GAGATTGACGACTTGGAGAGGCTTCTGGGTGTGTGTGGTGATGAAGACGG
TCTCTGGTGTGATGCTACCTTGTCCTCTTCCGTTACTTGGGAACCACCCG
TGAAGGAATTGGAATGCTCGATGCCGTTGAGTGAAAACGATGCCCAATTA
TTACCCATCACTTCTGCTTCTTCTACCGTGCATTCAATGAGTGACACTTG
CTGGAGCAGTTGGGGTTCCTTAGATCTTTCAGCCATGGAAGTGTTCTCAT
CAACTCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding