Vigun09g162100.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUXI1_ARATH (Auxilin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUXI1 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 7.148e-74 Identity = 131/184 (71.20%), Postives = 155/184 (84.24%), Query Frame = 1 Query: 1003 RVPSGSPASAMKPPTMTSF-DDLTLIFGGSPSSE--FQEVEGETEERRKARLGRHQRTQERALKAVADMNQRDIQTKMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKFNAEEL 1545
RVP G P + K ++T+ DDL+ IFG S S FQ+V+GETEERR+ARL RHQRTQERA KA+A+ N+RD+Q + EQ E+ RI + DV+IKRW AGKEGN+RALLSTLQYVLWPECGWQPVSLTD+IT+A+VKKVYRKATLCIHPDKVQQKGA L+QKYIAEKVFD+LKE+W KFN+EEL
Sbjct: 720 RVPPGQPENLRKTSSVTNIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQREQVEKDRIGVTLDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIHPDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNSEEL 903
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUXI2_ARATH (Auxilin-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12770 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 9.014e-71 Identity = 123/164 (75.00%), Postives = 143/164 (87.20%), Query Frame = 1 Query: 1060 DDLTLIFGG--SPSSEFQEVEGETEERRKARLGRHQRTQERALKAVADMNQRDIQTKMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKFNAEEL 1545
DDL+ IFG S S FQ+V+GETEERR+ARL RHQRTQERA KA+A+ N+RD+Q + EQ E+ RI + DV+I+RW AGKEGN+RALLSTLQYVLWPECGWQPVSLTD+IT A+VKKVYRKATLCIHPDKVQQKGA L+QKYIAEKVFD+LKE+W KFN+EEL
Sbjct: 727 DDLSSIFGAPASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQREQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHPDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNSEEL 890
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUL1_ARATH (Auxilin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUL1 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.192e-51 Identity = 87/153 (56.86%), Postives = 120/153 (78.43%), Query Frame = 1 Query: 1084 GSPSSEFQEVEGETEERRKARLGRHQRTQERALKAVADMNQRDIQTKMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKFNAEE 1542
G +S Q +GE +R KAR RHQRT +RA +A+A+ RD++T+ EQ ER R+A++ D +KRWS+GKE N+RAL+STLQY+L E GW+P+ LTD+++SA+V+K YRKATL +HPDK+QQ+GA+ +QKYI EKVFD+LKE+W KF A+E
Sbjct: 1297 GPSNSSNQTAKGEPIQRCKARSERHQRTSDRAAEALAEKKLRDLKTQKEQTERNRLAEALDADVKRWSSGKENNLRALISTLQYILGAESGWKPIPLTDLVSSASVRKAYRKATLYVHPDKLQQRGASTQQKYICEKVFDLLKEAWNKFGADE 1449
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: JAC1_ARATH (J domain-containing protein required for chloroplast accumulation response 1 OS=Arabidopsis thaliana OX=3702 GN=JAC1 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.811e-32 Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 1189 VADMNQRDIQTKMEQ-----EERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKFN 1533
V D+ Q + KME+ EE + I D +I++WS+GK GN+R+LLSTLQY+LW GW+PV L DMI AV+K Y++A L +HPDK+QQKGA+ QKY+AEKVF++L+E+W FN
Sbjct: 533 VEDITQD--ENKMEEANKDAEEIKNI----DAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 646
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: UCP7_SCHPO (UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ucp7 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.399e-20 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 1207 RDIQTKMEQ--EERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
R Q K EQ EER R+ + + +W GKE N+RALL++L +LWPEC WQ VSL++++ VK Y KA +HPDK+ Q+ ++E + IAE F IL +W F
Sbjct: 583 RMAQQKAEQLDEERSRLREPVQQIVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLPQQ-TSVEHQLIAESAFSILNHAWELF 691
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUXI_BOVIN (Putative tyrosine-protein phosphatase auxilin OS=Bos taurus OX=9913 GN=DNAJC6 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.250e-17 Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1222 KMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWP-ECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
+M +EE + D ++I W GKE N+RALLST+ VLW E W+PV + D++T VKKVYRKA L +HPDK G EQ A+ +F L ++W++F
Sbjct: 802 EMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEF 901
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUXI_HUMAN (Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens OX=9606 GN=DNAJC6 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.749e-17 Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1222 KMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWP-ECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
+M +EE + D ++I W GKE N+RALLST+ VLW E W+PV + D++T VKKVYRKA L +HPDK G EQ A+ +F L ++W++F
Sbjct: 805 EMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEF 904
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: AUXI_MOUSE (Putative tyrosine-protein phosphatase auxilin OS=Mus musculus OX=10090 GN=Dnajc6 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.839e-17 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1222 KMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWP-ECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
+M +EE + D ++I W GKE N+RALLST+ VLW E W+PV + D++T VKKVYR+A L +HPDK G EQ A+ +F L ++W++F
Sbjct: 830 EMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEF 929
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: GAK_RAT (Cyclin-G-associated kinase OS=Rattus norvegicus OX=10116 GN=Gak PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.552e-15 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 1222 KMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWP-ECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
+M ++E R D +++ W GKE N+RALLSTL VLW E W PVS+ D++T VKK YR+A L +HPDK G EQ A+ +F L ++W++F
Sbjct: 1197 EMRKQELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQS--AKMIFMELNDAWSEF 1296
BLAST of Vigun09g162100.1 vs. DB:Swiss
Match: GAK_MOUSE (Cyclin-G-associated kinase OS=Mus musculus OX=10090 GN=Gak PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.620e-15 Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 1222 KMEQEERRRIADSADVQIKRWSAGKEGNMRALLSTLQYVLWP-ECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKESWTKF 1530
+M ++E R D +++ W GKE N+RALLSTL VLW E W PVS+ D++T VKK YR+A L +HPDK G EQ A+ +F L ++W++F
Sbjct: 1197 EMRKQELARDTDPLKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEF 1296 The following BLAST results are available for this feature:
BLAST of Vigun09g162100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162100.1; organism=Vigna unguiculata; type=mRNA; length=2397bpback to top protein sequence of Vigun09g162100.1_Vu_IT97K-499-35_v1.1 >Vigun09g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=517bpback to top mRNA from alignment at Vu09:32979131..32984187+ Legend: mRNAfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162100.1; organism=Vigna unguiculata; type=mRNA; length=5057bp; location=Sequence derived from: Vu09:32979131..32984187+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:32979131..32984187+ >Vigun09g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162100.1; organism=Vigna unguiculata; type=CDS; length=1551bp; location=Sequence derived from: Vu09:32979131..32984187+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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