Vigun09g163400.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: Y1178_ARATH (BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana OX=3702 GN=At1g21780 PE=1 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.660e-158 Identity = 220/326 (67.48%), Postives = 269/326 (82.52%), Query Frame = 1 Query: 1 MGD-KVETLGRLAQWKIDNIGLCSYQKSDPFKVGIWNWYFSIVRNKYLFIHLFPEPSPVSKDQPPFARFVLRVSNSGSSRSFHISPVQEKLLRTHDDFVWSVETTFVGRYTIDVEFLDLKI---NGEETSSVWLSDGNVQSVASQSSSLRVLSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKNGCFVYLFEFGKVHDMKDEMNIFFQNADRELMLEMFQELLSVSKP 966 MGD KVET+ RLAQW+I+N G CS++KSDPFKVGIWNW+ SI RN+YL + LFPE S VSK+QPP A+FVLRVSN G +R F+ISPV EKLLRT DD VW V+++F GR+TIDVEFLDLKI NG E S VW +D +QS+++Q++ L+ LSRML+E+ D+ I TADG+L AHKA+LSASS VF+SMFHH+L EKESSTIHI+DMS ESC ALLS+LYG I +++F KHRLALLGAANKYDI LK CEESL+E I+S NVLE L EAWLYQL KLK GC +YLF+FGK++D+++E++ FF+ ADRELMLEMFQE+LSV KP Sbjct: 1 MGDTKVETISRLAQWRIENFGPCSFKKSDPFKVGIWNWHLSIERNRYLSVRLFPELSRVSKEQPPVAKFVLRVSNVGPNRRFYISPVYEKLLRTTDDCVWHVDSSFHGRFTIDVEFLDLKICPVNGGEASPVWPTDATMQSISTQTT-LKCLSRMLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLMEKESSTIHIDDMSRESCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQEAWLYQLEKLKKGCLMYLFDFGKIYDVREEISSFFRQADRELMLEMFQEVLSVWKP 325
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: Y1576_ARATH (BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 8.598e-108 Identity = 157/323 (48.61%), Postives = 231/323 (71.52%), Query Frame = 1 Query: 10 KVETLGRLAQWKIDNIGLCSYQKSDPFKVGIWNWYFSIVRNKYLF-IHLFPEPSPVSKDQPPFARFVLRV-SNSGSSRSFHISPVQEKLLRTHDDFVWSVETTFVGRYTIDVEFLDLKI---NGEETSSVWLSDGNVQSVASQSSSLRVLSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKNGCFVYLFEFGKVHDMKDEMNIFFQNADRELMLEMFQELLSVSK 963 +V+T+ RLAQW+I N+ +Y+KSDPFK+G+WNW+ S+ ++K L + L+PE S ++++ PP A F LRV S++G ++ V +K ++T++DF+W++E G+ IDVEFLDLK+ + E S+W ++G+ ++ SQ +++ L RML E+ + D+TI +DGS+ AH+AVL+A SPVF+SMF H+LKEKE S I++ DM L++C A LS++YG I +DF HRLALL AA KYDI LK+ C SLL+ I ++NVLE L A+LYQLP+LK C YL +FGK+ +++DE NIF Q ADR+L+ E+F E+LS K Sbjct: 7 RVDTISRLAQWRIHNLSSSTYRKSDPFKMGLWNWHLSVEKSKMLLNVKLYPEVSNLTRENPPVASFALRVVSSTGERKALSHPEVIDKRIKTNEDFIWTIEVPLTGKIIIDVEFLDLKVLSQDSGELYSIW-ANGSTEN-QSQVTAVTSLGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQAFLSYIYGNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNVLERLQNAYLYQLPELKASCMRYLVKFGKIFEIRDEFNIFMQCADRDLISEIFHEVLSTWK 327
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: MEL26_CAEEL (Protein maternal effect lethal 26 OS=Caenorhabditis elegans OX=6239 GN=mel-26 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.688e-16 Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 448 RMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMF-HHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKNGCFVYLF 855 R+ + D I +RAHKAVL+A SPVF +M H + E +SS ++I DM + ++ ++Y KD + ALL AA+KY + LK CE+ L+E I+ N +L LY PKL+ Y+ Sbjct: 193 RLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIAADKYRLEELKSHCEKYLVENINIENACSLLIIGDLYSAPKLRKRAVTYIL 329
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tdpoz2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.575e-15 Identity = 43/133 (32.33%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLA--LLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKN 834 L ++ + D +++ A +RAHKA+L+A SPVF++MF H ++E+ ++ I+++ + ++ F+Y T H +A +L AA KY + GLK ICE+SL + N L A L+ +LK Sbjct: 178 LGKLWENPLFTDCSLLVAGHEIRAHKAILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIY-TGKAPTLHSHSMACDVLAAAEKYGLEGLKVICEDSLCRNLSVENAAHTLIVADLHSTEQLKT 309
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis OX=8364 GN=spop PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.816e-14 Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKN 834 L + + ++ D + A +AHKA+L+A SPVF +MF H ++E + + + I+D+ + ++ F+Y T + K LL AA+KY + LK +CEE+L + N E+L A L+ +LK Sbjct: 190 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIY-TGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKT 319
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis OX=8355 GN=spop-a PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.816e-14 Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKN 834 L + + ++ D + A +AHKA+L+A SPVF +MF H ++E + + + I+D+ + ++ F+Y T + K LL AA+KY + LK +CEE+L + N E+L A L+ +LK Sbjct: 190 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIY-TGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKT 319
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis OX=8355 GN=spop-b PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.076e-14 Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKN 834 L + + ++ D + A +AHKA+L+A SPVF +MF H ++E + + + I+D+ + ++ F+Y T + K LL AA+KY + LK +CEE+L + N E+L A L+ +LK Sbjct: 190 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIY-TGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKT 319
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus OX=10090 GN=Tdpoz5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.007e-13 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLA--LLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKNGCFVYL 852 L + + + D ++ A RAHKA+L+A SPVF++MF H ++E+ + I D+ + ++ F+Y T H +A +L AA+KY + GLK +CE++L + N + L A L++ +LK ++ Sbjct: 178 LGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIY-TGKAPHLQSHSMATDVLTAADKYGLEGLKVLCEDALCRNLSVENAAQTLILADLHKREQLKTQALYFI 315
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii OX=9601 GN=SPOP PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.059e-13 Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLK 831 L + + ++ D + A +AHKA+L+A SPVF +MF H ++E + + + I D+ E ++ F+Y T + K LL AA+KY + LK +CE++L + N E+L A L+ +LK Sbjct: 190 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY-TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 318
BLAST of Vigun09g163400.1 vs. DB:Swiss
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus OX=10090 GN=Spop PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.059e-13 Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 442 LSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLK 831 L + + ++ D + A +AHKA+L+A SPVF +MF H ++E + + + I D+ E ++ F+Y T + K LL AA+KY + LK +CE++L + N E+L A L+ +LK Sbjct: 190 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY-TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 318 The following BLAST results are available for this feature:
BLAST of Vigun09g163400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g163400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g163400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g163400.1; organism=Vigna unguiculata; type=mRNA; length=1385bpback to top protein sequence of Vigun09g163400.1_Vu_IT97K-499-35_v1.1 >Vigun09g163400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g163400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g163400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=326bpback to top mRNA from alignment at Vu09:33095077..33098087- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g163400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g163400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g163400.1; organism=Vigna unguiculata; type=mRNA; length=3011bp; location=Sequence derived from: Vu09:33095077..33098087- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:33095077..33098087- >Vigun09g163400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g163400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g163400.1; organism=Vigna unguiculata; type=CDS; length=978bp; location=Sequence derived from: Vu09:33095077..33098087- (Vigna unguiculataback to top |