Vigun09g165000.1

Transcript Overview
NameVigun09g165000.1
Unique NameVigun09g165000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length615
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:33317593..33318207 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL493Pisum sativum Cameor genome v1aPisum sativum
psvuL653Pisum sativum Cameor genome v1aPisum sativum
crvuL456Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL566Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL802Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL443Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0639Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0597Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1236Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0322Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0771Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1209Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL733Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR673Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR692Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR695Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL335Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL311Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL466Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL440Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL400Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL422Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL584Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL320Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL411Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL608Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL334Cicer arietinum
carvuL419Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL438Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL450Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR723Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR763Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR771Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR827Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL296Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL311Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL624Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL708Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_032794Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058930965.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.2g120120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_12093Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg53792.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan07g223200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_001338Cajanus cajan Asha genome v1.0Cajanus cajan
Psat5g087040.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.02G102000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan04g177000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_06514.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_12661Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat05G0263200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_09207Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_11556.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr09.2032Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.02G135200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cr_13948.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr09.853Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_012716412.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_02G01115.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va04G055180.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_13861.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.009G125700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.2g098360.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g165000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g165000Vigun09g165000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g165000.1Vigun09g165000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g165000.1_Vu_IT97K-499-35_v1.1Vigun09g165000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g165000.1.v1.1.CDS.1Vigun09g165000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.590e-25
Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCLNPYTCQRGERKSGID-RCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEVST 591
            LSYEEL+ LG+ +G E+RGLSA+ I++ L     + G+ ++G +  CVIC+++YED E ++ L C+H YH++CI+ WL+I KVCP+CS EVST
Sbjct:  243 LSYEELLALGDIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVST 334          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: BB_ARATH (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.814e-22
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCLNPYTCQRGE---RKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEV 585
            ++YEEL+ELGE +G E+RGLS   I T L     + G    RK   +RCVICQ++Y+ GE  + L C+H YH++CISKWL I KVCP+C++EV
Sbjct:  150 MTYEELVELGEAVGTESRGLSQELIET-LPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.264e-17
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCLNPYTCQRG-----ERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNE-VSTP 594
            +SYEEL+ LGE IG+ + GLS   I   +  +          E    I+ C ICQ EY +G+ +  L+C H +H DCI +W+ IK +CPIC  E + TP
Sbjct:  606 MSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEALKTP 704          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 5.776e-16
Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCLN--PYTCQRGERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSN 579
            +SYEEL+ L E IG  + GLS  E++  L    ++  R E     + C ICQ EY DG+ +  L C H +H  C+ +WL +K  CPIC N
Sbjct:  573 MSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICKN 662          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.842e-14
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCL--NPYTCQRGERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPIC 573
            +SYEEL+ LGE IG+ + GLS   I   +  + +T         ++ C +CQ EY +G+ +  L C H +H  C+ +WL +K +CPIC
Sbjct:  572 MSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: RHG1A_ARATH (Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RHG1A PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.168e-13
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEISTCLNPYTCQRGERK-SGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPIC 573
            +SYEEL+ L E IG+   G++   IS  L     +   +     + C +CQ EY +GE +  L+C H +H+ CI +WL+ K +CPIC
Sbjct:  591 MSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: ZFP1_ORYSJ (Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZFP1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.364e-12
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
Query:  316 LSYEELMELGEFIGEETRGLSANEI------------STCLNPYTCQRGERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPIC 573
            ++YEEL+ L E IG+   GL+ + I            S+C+   + +  E     D C+ICQ EY+  E +  L C H YH DCI +WL +K +CPIC
Sbjct:  417 MTYEELLALEEQIGDVNTGLAKSYIVEKLKTSLFVPGSSCM---SNKSSESSMENDACIICQEEYQVKECIGTLDCGHRYHEDCIKQWLMVKNLCPIC 511          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: RN165_HUMAN (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.996e-11
Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = 1
Query:  319 SYEELMELGEFIGEETRGLSANEISTCLNPYTCQR------------GERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEVST 591
            SYEEL++L + +G  TRG   N I     P+  ++            GE     ++C IC    EDGE V  L C H +H  C+ +WL + K CPIC  ++ T
Sbjct:  238 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: RN165_MOUSE (E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.023e-11
Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = 1
Query:  319 SYEELMELGEFIGEETRGLSANEISTCLNPYTCQR------------GERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEVST 591
            SYEEL++L + +G  TRG   N I     P+  ++            GE     ++C IC    EDGE V  L C H +H  C+ +WL + K CPIC  ++ T
Sbjct:  239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341          
BLAST of Vigun09g165000.1 vs. DB:Swiss
Match: RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4)

HSP 1 Score: 64.3142 bits (155), Expect = 6.841e-11
Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1
Query:  319 SYEELMELGEFIGE-ETRGLSANEISTCLNPYTCQRGERKSGIDRCVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEVS 588
            +YE L+ L E +GE + RGL+  +I   L  Y       +S    CV+C  ++E  + +  L C H +HA C+ KWL+  + CPIC  + S
Sbjct:  419 NYEALLNLAERLGEAKPRGLTKADIEQ-LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508          
The following BLAST results are available for this feature:
BLAST of Vigun09g165000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BBR_ARATH3.590e-2550.54E3 ubiquitin ligase BIG BROTHER-related OS=Arabido... [more]
BB_ARATH5.814e-2251.61E3 ubiquitin-protein ligase BIG BROTHER OS=Arabido... [more]
MBR1_ARATH9.264e-1740.40E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis th... [more]
HIP1_ORYSJ5.776e-1641.11Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... [more]
MBR2_ARATH1.842e-1437.50E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis th... [more]
RHG1A_ARATH1.168e-1337.93Probable E3 ubiquitin-protein ligase RHG1A OS=Arab... [more]
ZFP1_ORYSJ5.364e-1237.76Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... [more]
RN165_HUMAN1.996e-1134.95E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens... [more]
RN165_MOUSE2.023e-1134.95E3 ubiquitin-protein ligase RNF165 OS=Mus musculus... [more]
RNF38_HUMAN6.841e-1135.16E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..102
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 150..198
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 151..191
e-value: 8.1E-6
score: 35.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 150..191
e-value: 7.4E-12
score: 45.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 151..192
score: 11.486
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 126..201
e-value: 8.0E-17
score: 62.2

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g165000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g165000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g165000.1; organism=Vigna unguiculata; type=mRNA; length=615bp
ATGGAAGGTGAAGAGGGAAAACAGTGCTCCCACAAAAACCCTTACGTTGA
ACTAGAAGAAGTTGACTTCGATTTTATTCTAGCATTGAGCATGCAGGAAC
AAGAGAGAGAGTTCACAATGCTTTCAACCATTGAAAGTGAAAGTGATGAA
TATCTGAGTGACTCCTCTATtgataatgatgatgatgatgatCCTGACTT
CGTAGAGAGTCAAGAGTTTGACTCTGATCTTCAGTTTCTtgaagatgagg
aaagcaatgataacgatgatgatgaagaaatggaagtggaagaagatgag
atTGATCCAGACGAGTTATCTTATGAAGAGTTGATGGAGTTGGGAGAGTT
TATAGGAGAAGAAACGAGAGGATTATCCGCAAATGAAATCTCTACGTGCT
TGAACCCATATACTTGCCAACGTGGTGAAAGAAAAAGTGGAATCGATCGT
TGTGTGATTTGTCAGGTTGAATATGAAGATGGTGAAGCAGTGGTGGCACT
TCAATGTGAGCACCCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAA
TTAAGAAGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCAAACATG
GCTTCCAACACTTAA
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protein sequence of Vigun09g165000.1_Vu_IT97K-499-35_v1.1

>Vigun09g165000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g165000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g165000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=205bp
MEGEEGKQCSHKNPYVELEEVDFDFILALSMQEQEREFTMLSTIESESDE
YLSDSSIDNDDDDDPDFVESQEFDSDLQFLEDEESNDNDDDEEMEVEEDE
IDPDELSYEELMELGEFIGEETRGLSANEISTCLNPYTCQRGERKSGIDR
CVICQVEYEDGEAVVALQCEHPYHADCISKWLQIKKVCPICSNEVSTPNM
ASNT*
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mRNA from alignment at Vu09:33317593..33318207-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g165000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g165000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g165000.1; organism=Vigna unguiculata; type=mRNA; length=615bp; location=Sequence derived from: Vu09:33317593..33318207- (Vigna unguiculata
ATGGAAGGTGAAGAGGGAAAACAGTGCTCCCACAAAAACCCTTACGTTGA ACTAGAAGAAGTTGACTTCGATTTTATTCTAGCATTGAGCATGCAGGAAC AAGAGAGAGAGTTCACAATGCTTTCAACCATTGAAAGTGAAAGTGATGAA TATCTGAGTGACTCCTCTATTGATAATGATGATGATGATGATCCTGACTT CGTAGAGAGTCAAGAGTTTGACTCTGATCTTCAGTTTCTTGAAGATGAGG AAAGCAATGATAACGATGATGATGAAGAAATGGAAGTGGAAGAAGATGAG ATTGATCCAGACGAGTTATCTTATGAAGAGTTGATGGAGTTGGGAGAGTT TATAGGAGAAGAAACGAGAGGATTATCCGCAAATGAAATCTCTACGTGCT TGAACCCATATACTTGCCAACGTGGTGAAAGAAAAAGTGGAATCGATCGT TGTGTGATTTGTCAGGTTGAATATGAAGATGGTGAAGCAGTGGTGGCACT TCAATGTGAGCACCCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAA TTAAGAAGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCAAACATG GCTTCCAACACTTAA
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Coding sequence (CDS) from alignment at Vu09:33317593..33318207-

>Vigun09g165000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g165000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g165000.1; organism=Vigna unguiculata; type=CDS; length=615bp; location=Sequence derived from: Vu09:33317593..33318207- (Vigna unguiculata
ATGGAAGGTGAAGAGGGAAAACAGTGCTCCCACAAAAACCCTTACGTTGA
ACTAGAAGAAGTTGACTTCGATTTTATTCTAGCATTGAGCATGCAGGAAC
AAGAGAGAGAGTTCACAATGCTTTCAACCATTGAAAGTGAAAGTGATGAA
TATCTGAGTGACTCCTCTATTGATAATGATGATGATGATGATCCTGACTT
CGTAGAGAGTCAAGAGTTTGACTCTGATCTTCAGTTTCTTGAAGATGAGG
AAAGCAATGATAACGATGATGATGAAGAAATGGAAGTGGAAGAAGATGAG
ATTGATCCAGACGAGTTATCTTATGAAGAGTTGATGGAGTTGGGAGAGTT
TATAGGAGAAGAAACGAGAGGATTATCCGCAAATGAAATCTCTACGTGCT
TGAACCCATATACTTGCCAACGTGGTGAAAGAAAAAGTGGAATCGATCGT
TGTGTGATTTGTCAGGTTGAATATGAAGATGGTGAAGCAGTGGTGGCACT
TCAATGTGAGCACCCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAA
TTAAGAAGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCAAACATG
GCTTCCAACACTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD