Vigun09g168000.1

Transcript Overview
NameVigun09g168000.1
Unique NameVigun09g168000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1702
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:33650182..33653173 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
crvuL574Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvuL0597Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0322Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vfhvuL093Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL314Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL291Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL409Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL411Cicer arietinum
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL708Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan04g180400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_11444.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_001384Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g081160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g066520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.02G099400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg52615.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
PvulFLAVERTChr09.836Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigan.02G130600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.1g206760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_12687Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va04G055840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g168000Vigun09g168000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g168000.1Vigun09g168000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g168000.1_Vu_IT97K-499-35_v1.1Vigun09g168000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g168000.1.v1.1.three_prime_UTR.2Vigun09g168000.1.v1.1.three_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR
Vigun09g168000.1.v1.1.three_prime_UTR.1Vigun09g168000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g168000.1.v1.1.CDS.3Vigun09g168000.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g168000.1.v1.1.CDS.2Vigun09g168000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g168000.1.v1.1.CDS.1Vigun09g168000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g168000.1.v1.1.five_prime_UTR.1Vigun09g168000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.678e-35
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:  520 DTRDYFLGPGLNELIEQITEND-RQGPAPAPERAIDAIPTVKIASAHLKE-NSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCRH 804
            +T DYF GPGL EL EQ++    R+GP PAP  AIDA+PT+KIA  HL+  +S CPVC++EFE+G EA+++ C HIYHSDCIVPWL  HNSCPVCR 
Sbjct:  136 NTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQ 232
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.060e-33
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 1 
Query:  511 RTVDTRDYFLGPGLNELIEQITEN-DRQGPAPAPERAIDAIPTVKIASAHLKE-NSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            R  +  DYF GPGL ELIEQ++     +GP PAP+ +IDA+PT+KI   HLK  +S CPVC++EFE+  EA+++ C HIYHSDCIVPWL  HNSCPVCR
Sbjct:  129 RGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 227
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.167e-30
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 1 
Query:  529 DYFLGPGLNELIEQITEND--RQGPAPAPERAIDAIPTVKIASAHLK-ENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            DYF GPGL +LI+Q+ END  R G  PA + AIDA+PTVK+    LK E ++C VC +EFE G + +++ CKH++H DC++PWL LHNSCPVCR
Sbjct:  164 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.051e-29
Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 1 
Query:  529 DYFLGPGLNELIEQITEND--RQGPAPAPERAIDAIPTVKIASAHL-KENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCRH 804
            DYF+GPGL +LI+Q+ END  R G  PA + AI+A+P V I  ++L  E ++C VC ++FE G EA+++ CKH+YH DC++PWL LHNSCPVCRH
Sbjct:  172 DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRH 266
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.544e-22
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1 
Query:  529 DYFLGPGLNELIEQITEND-------RQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            +  +G G   L+EQ+++ +       R G  PA + AI+++P V+I+  H K  + C VC E FE G E RE+ CKHI+H DCIVPWL + NSCPVCR
Sbjct:  159 EILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 256
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.773e-21
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1 
Query:  529 DYFLGPGLNELIEQITEND-------RQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            +  +G G   L+EQ+++ +       R G  PA + AI+++P V+I+  H+   + C VC E FE   EARE+ CKH++H DCIVPWL + NSCPVCR
Sbjct:  143 EILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR 240
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.686e-21
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:  526 RDYFLGPGLNELIEQITEND--RQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
             +Y LG GL+ L++ + E+D  R G  PA + A++A+PTVKI     +E   C VC ++ EVG +A+++ C+H +HS CI+PWL LH+SCPVCR
Sbjct:  152 EEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKI-----EEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCR 240
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: RN126_XENTR (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.592e-20
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:  529 DYFLGP-GLNELIEQITEN-DRQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            DY  G  GL+ +I Q+    +  GP PA    I A+PT++I   H+    +CPVC+E++ VG   R+L C H++H+DCI+PWL  H++CPVCR
Sbjct:  176 DYAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 268
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: R126B_XENLA (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.077e-20
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:  529 DYFLGP-GLNELIEQITEN-DRQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            DY  G  GL+ +I Q+    +  GP PA    I A+PT++I   H+    +CPVC+E++ VG   R+L C H++H+DCI+PWL  H++CPVCR
Sbjct:  177 DYAWGANGLDTIITQLLNQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
[Close]
BLAST of Vigun09g168000.1 vs. DB:Swiss
Match: R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.230e-20
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:  529 DYFLGP-GLNELIEQITEN-DRQGPAPAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCR 801
            DY  G  GL+ +I Q+    +  GP PA    I A+PT++I   H+    +CPVC+E++ VG   R+L C H++H+DCI+PWL  H++CPVCR
Sbjct:  177 DYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
The following BLAST results are available for this feature:
BLAST of Vigun09g168000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RHC1A_ARATH4.678e-3562.89Probable E3 ubiquitin-protein ligase RHC1A OS=Arab... [more]
RZF1_ARATH2.060e-3359.60E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis th... [more]
RNG1L_ARATH3.167e-3056.38E3 ubiquitin-protein ligase RING1-like OS=Arabidop... [more]
RING1_GOSHI1.051e-2955.79E3 ubiquitin-protein ligase RING1 OS=Gossypium hir... [more]
RDUF1_ARATH2.544e-2245.92E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis t... [more]
RDUF2_ARATH2.773e-2143.88E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis t... [more]
SIRP1_ORYSJ4.686e-2146.81E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa ... [more]
RN126_XENTR1.592e-2044.09E3 ubiquitin-protein ligase RNF126 OS=Xenopus trop... [more]
R126B_XENLA5.077e-2044.09E3 ubiquitin-protein ligase RNF126-B OS=Xenopus la... [more]
R126A_XENLA5.230e-2044.09E3 ubiquitin-protein ligase RNF126-A OS=Xenopus la... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 226..266
e-value: 2.5E-6
score: 37.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 225..267
e-value: 3.9E-12
score: 46.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 226..267
score: 11.988
IPR039525E3 ubiquitin-protein ligase RNF126-like, zinc-ribbonPFAMPF14369zinc_ribbon_9coord: 23..58
e-value: 9.1E-11
score: 41.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 189..273
e-value: 7.6E-21
score: 75.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..135
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 226..267
e-value: 1.79657E-21
score: 83.9064
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 206..273

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g168000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g168000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g168000.1; organism=Vigna unguiculata; type=mRNA; length=1702bp
TGAAATAAAGGAACCTCCATTAACAAGTCTAGTAGAGAATGAAGCGACGA
TGATAAAGAACCAAACAATGGCAATTGTTTTTGTATGTTTTTGTTTGAGC
ACTCATCCTTTTCCTACCCATGCAAGGAACAGTGGAAAGCAAAACCTGAA
CCCAAAGCTTATCCTAACTAAAAAGAATCACTTCATGCAAACCATTAAGT
CATCCTTCCCTCTTCTCCTATATAAACATTCTCCTACTTCCAATTCACCC
TTCACTAACCAATCTCATACGTCAATTCTAAACCCATAATAAACTTCAAC
AACAAAAACAACCCACCATGTCGTTGAGTCCTCCCAGAGAGAGAAACAAC
GGCAATGGCAGAAGGCGAGAGAGGCCAACGTTCCAGATGTACTGGTGCTT
CCAGTGCAATCGCATGGTCCGCGTCGCAGTGGATACCAACAACCCCTCAG
ACGTCACGTGTCCGCGATGCTTCGGACAATTCATATGCGAAGTAAACGTG
CCGCGCCCAAGACTCATCGTCGATTTCACTACCCCAGACCCTTCCCCAGA
AGCGCGTTTGCTCGAAGCGCTTTCCCTCATGATGGACCCACCCATACGCC
GCTTCCCGGGTCTCCTTCAACCCGAACCCGAAGAGGTCCCCGTGCACCAT
CACCGCCGCCGTCGCTTACGCCGCCGCCAACCCGAACCCGAACCCGTCCC
TGAACCCCCACACCCCCGCCCTCGCACGTGGATCGTATTCCAGCCCAATG
ACCAACCCAACCCCTTCCTGCCCATTAACAACATTCACAACCGCCCCGGC
CCAGGCCCATTCCCATTCCCGCTCCCGCGCACCGTGGACACGCGCGACTA
TTTCTTGGGACCTGGACTCAACGAACTCATCGAACAGATAACCGAGAACG
ACAGACAGGGTCCCGCACCGGCGCCGGAGAGAGCCATCGACGCTATTCCG
ACGGTGAAAATTGCGAGCGCGCATCTTAAGGAGAATTCTAAGTGTCCAGT
TTGTCAGGAGGAATTCGAGGTTGGCGGAGAAGCGAGGGAACTTGCGTGCA
AACATATATATCACTCGGATTGCATTGTTCCGTGGCTGAGGCTTCACAAT
TCTTGCCCTGTGTGCCGTCACGAGGTTCCTGTGCCGTCTTCTTCATCGGA
GGAGGATGAGTGTATTGATGTGAGCGGAGATGAAGGTAGGTTGCGGAGGT
GTTTGAGGTGGACCCGTCGTTTTACTTCGGTTTGGCCTTTCAATTCAAGG
TATCGACGGGTTCACCCTCAAGGAAATAATAATGTTGCTGCTGCTTCTTC
CAGGGGATATTTTGCATCTGACAGTCCTACACTCTCTGGCGCAGCTAGAA
GGCAACCCTCTTGCTGCATTCTTTAAGCTCTTCAATTATTTACATCCAAG
GCTGATGAACTGGTTAGGGTTGCATCTTCTAAAGCCACTAAACAACATGC
CATGATCACCAGGTAACATGGGCTTGCGATTCAAAAATAAAGTAAAATGG
CCCTCAAGCTTCATTCAAATTGAAAATTAGATTCATCACCACATACTACG
ACGTTGAGATGCGTATGATACTGCCACTGTAAATATTATTTGTTATTGGC
AAAGACAATTATCACAACACAACTGGAAGACTTTTTTTATAAGAAAAAAA
ATATTACAAATGCTACCTATCTAATAAATTTATGGTTATCTGATACTTTT
CC
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protein sequence of Vigun09g168000.1_Vu_IT97K-499-35_v1.1

>Vigun09g168000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g168000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g168000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=353bp
MSLSPPRERNNGNGRRRERPTFQMYWCFQCNRMVRVAVDTNNPSDVTCPR
CFGQFICEVNVPRPRLIVDFTTPDPSPEARLLEALSLMMDPPIRRFPGLL
QPEPEEVPVHHHRRRRLRRRQPEPEPVPEPPHPRPRTWIVFQPNDQPNPF
LPINNIHNRPGPGPFPFPLPRTVDTRDYFLGPGLNELIEQITENDRQGPA
PAPERAIDAIPTVKIASAHLKENSKCPVCQEEFEVGGEARELACKHIYHS
DCIVPWLRLHNSCPVCRHEVPVPSSSSEEDECIDVSGDEGRLRRCLRWTR
RFTSVWPFNSRYRRVHPQGNNNVAAASSRGYFASDSPTLSGAARRQPSCC
IL*
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mRNA from alignment at Vu09:33650182..33653173-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g168000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g168000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g168000.1; organism=Vigna unguiculata; type=mRNA; length=2992bp; location=Sequence derived from: Vu09:33650182..33653173- (Vigna unguiculata
TGAAATAAAGGAACCTCCATTAACAAGTCTAGTAGAGAATGAAGCGACGA
TGATAAAGAACCAAACAATGGCAATTGTTTTTGTATGTTTTTGTTTGAGC
ACTCATCCTTTTCCTACCCATGCAAGGAACAGTGGAAAGCAAAACCTGAA
CCCAAAGCTTATCCTAACTAAAAAGAATCACTTCATGCAAACCATTAAGT
CATCCTTCCCTCTTCTCCTATATAAACATTCTCCTACTTCCAATTCACCC
TTCACTAACCAATCTCATACGTCAATTCTAAACCCATAATAAACTTCAAC
AACAAAAACAACCCACCATGTCGTTGAGTCCTCCCAGAGAGAGAAACAAC
GGCAATGGCAGAAGGCGAGAGAGGCCAACGTTCCAGATGTACTGGTGCTT
CCAGTGCAATCGCATGGTCCGCGTCGCAGTGGATACCAACAACCCCTCAG
ACGTCACGTGTCCGCGATGCTTCGGACAATTCATATGCGAAGTAAACGTG
CCGCGCCCAAGACTCATCGTCGATTTCACTACCCCAGACCCTTCCCCAGA
AGCGCGTTTGCTCGAAGCGCTTTCCCTCATGATGGACCCACCCATACGCC
GCTTCCCGGGTCTCCTTCAACCCGAACCCGAAGAGGTCCCCGTGCACCAT
CACCGCCGCCGTCGCTTACGCCGCCGCCAACCCGAACCCGAACCCGTCCC
TGAACCCCCACACCCCCGCCCTCGCACGTGGATCGTATTCCAGCCCAATG
ACCAACCCAACCCCTTCCTGCCCATTAACAACATTCACAACCGCCCCGGC
CCAGGCCCATTCCCATTCCCGCTCCCGCGCACCGTGGACACGCGCGACTA
TTTCTTGGGACCTGGACTCAACGAACTCATCGAACAGATAACCGAGAACG
ACAGACAGGGTCCCGCACCGGCGCCGGAGAGAGCCATCGACGCTATTCCG
ACGGTGAAAATTGCGAGCGCGCATCTTAAGGAGAATTCTAAGTGTCCAGT
TTGTCAGGAGGAATTCGAGGTTGGCGGAGAAGCGAGGGAACTTGCGTGCA
AACATATATATCACTCGGATTGCATTGTTCCGTGGCTGAGGCTTCACAAT
TCTTGCCCTGTGTGCCGTCACGAGGTTCCTGTGCCGTCTTCTTCATCGGA
GGAGGATGAGTGTATTGATGTGAGCGGAGATGAAGGTAGGTTGCGGAGGT
GTTTGAGGTGGACCCGTCGTTTTACTTCGGTTTGGCCTTTCAATTCAAGG
TATCGACGGGTTCACCCTCAAGGAAATAATAATGTTGCTGCTGCTTCTTC
CAGGGGTGAATCATAATTAATTTTATTCAATTCACTGTTTATTCTTCTAT
CTTCATCACTCTTTCACATTAGTGTTTCATACTTGTGTTACTGCTGTTAT
CACTGTTGTGATGTGCTGGTGCTGGTGCATTCAATTCAATTAAATCATTC
ATTGTTTGCTTACGCTATCTTATGAATTATTAAATTATCACCTATGGTGA
CAGAGTTGGGTTATTATTATTCTCTTACCAAATACATTATCAGAGTTATT
TCATAGTTGAGGAGCAATTTAAATTTGCTATTTCTGAATTGAGGAGCAAT
TTCTGTGTGTTATTTCTGAATTGGGAGCAATTTTTGTGTGTTAATTCTGA
ATTGAGGGGCAGAATTTAAAATGATGTTAAGATAGCTTTATAATGTAAAC
TTGGATACAAGATTAAATATATTTTGGGCTTTAAATTGATTGTTTCTACA
GATATTAATGCTTGTCTAGAAATGTTCTCAGATTGAAATGTATTTTGATT
ATACGAACTCGTTTGGAAGATGATGCAGAACAATAAGAAAATAAGTTTAG
ATGATTTTGTGCATGAGTGTGTGTTATTAGCTGAGTTGACTCACCATTTA
TTTATTTATTGGCCAGGATATTTTGCATCTGACAGTCCTACACTCTCTGG
CGGTACGAATCAAAATCTAACTCTTCTAGAATTCTCCCATTGAATTTTGA
AACCTAATGAGAAAAGAAATATAAGTACCACAAATGAGACAAAACAAAAA
TGCATATTGATCAGTTGTTAGATTGTAGTGGTTGAATATAGGCACCAAAT
ACTGAAAAGTAACCATCATATTTGCTTTTCATTTTCAGCAGCTAGAAGGC
AACCCTCTTGCTGCATTCTTTAAGCTCTTCAATTATTTACATCCAAGGCT
GATGAACTGGTTAGGGTTGCATCTTCTAAAGCCACTAAACAACATGCCAT
GATCACCAGTAAGTTTATTTCAAGTCTCTTTTCAACTTTTAATCCATCTT
AAAAATAAATAACAGTTTAATTAACTTTTTATCCCCTAATTAATATATAC
CTCTATCGTTTTTTGTCTCTTAAAAAAAAAAATCTTGTCGCTCAGTTCCT
CAGAAGACGTTTTAGTTCTTGTTCTTCAATAATAACGTGACTAATGGATA
TTGGAAAATAACTGTACTTTTTAAAACTAATATGGATTAAAATGAAAAAG
TTTCATTGTAAAAAGAATCAAAAGAAAAAAGTTTATAATTCTATAGAAAC
TACAATAGCAATATCTAAGGACTAAAAGCGAACATGATTAACAATATGAC
CAAAACCAACTAATAATTTTTAGATATCAAAATTAAAAGAGGAGTGCATT
ATAGAGACTAAACTGTTAAAACCATACACAAATAAATTATGTGTGCTGAA
GGAAAGGCCTGGTTCTGAATAAATTTCAACGGATGAATTGCATTTTTGCA
GGGTAACATGGGCTTGCGATTCAAAAATAAAGTAAAATGGCCCTCAAGCT
TCATTCAAATTGAAAATTAGATTCATCACCACATACTACGACGTTGAGAT
GCGTATGATACTGCCACTGTAAATATTATTTGTTATTGGCAAAGACAATT
ATCACAACACAACTGGAAGACTTTTTTTATAAGAAAAAAAATATTACAAA
TGCTACCTATCTAATAAATTTATGGTTATCTGATACTTTTCC
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Coding sequence (CDS) from alignment at Vu09:33650182..33653173-

>Vigun09g168000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g168000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g168000.1; organism=Vigna unguiculata; type=CDS; length=1059bp; location=Sequence derived from: Vu09:33650182..33653173- (Vigna unguiculata
ATGTCGTTGAGTCCTCCCAGAGAGAGAAACAACGGCAATGGCAGAAGGCG
AGAGAGGCCAACGTTCCAGATGTACTGGTGCTTCCAGTGCAATCGCATGG
TCCGCGTCGCAGTGGATACCAACAACCCCTCAGACGTCACGTGTCCGCGA
TGCTTCGGACAATTCATATGCGAAGTAAACGTGCCGCGCCCAAGACTCAT
CGTCGATTTCACTACCCCAGACCCTTCCCCAGAAGCGCGTTTGCTCGAAG
CGCTTTCCCTCATGATGGACCCACCCATACGCCGCTTCCCGGGTCTCCTT
CAACCCGAACCCGAAGAGGTCCCCGTGCACCATCACCGCCGCCGTCGCTT
ACGCCGCCGCCAACCCGAACCCGAACCCGTCCCTGAACCCCCACACCCCC
GCCCTCGCACGTGGATCGTATTCCAGCCCAATGACCAACCCAACCCCTTC
CTGCCCATTAACAACATTCACAACCGCCCCGGCCCAGGCCCATTCCCATT
CCCGCTCCCGCGCACCGTGGACACGCGCGACTATTTCTTGGGACCTGGAC
TCAACGAACTCATCGAACAGATAACCGAGAACGACAGACAGGGTCCCGCA
CCGGCGCCGGAGAGAGCCATCGACGCTATTCCGACGGTGAAAATTGCGAG
CGCGCATCTTAAGGAGAATTCTAAGTGTCCAGTTTGTCAGGAGGAATTCG
AGGTTGGCGGAGAAGCGAGGGAACTTGCGTGCAAACATATATATCACTCG
GATTGCATTGTTCCGTGGCTGAGGCTTCACAATTCTTGCCCTGTGTGCCG
TCACGAGGTTCCTGTGCCGTCTTCTTCATCGGAGGAGGATGAGTGTATTG
ATGTGAGCGGAGATGAAGGTAGGTTGCGGAGGTGTTTGAGGTGGACCCGT
CGTTTTACTTCGGTTTGGCCTTTCAATTCAAGGTATCGACGGGTTCACCC
TCAAGGAAATAATAATGTTGCTGCTGCTTCTTCCAGGGGATATTTTGCAT
CTGACAGTCCTACACTCTCTGGCGCAGCTAGAAGGCAACCCTCTTGCTGC
ATTCTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR039525RNF126-like_zinc-ribbon
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity