Vigun09g175000.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 GN=RAP2-4 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.477e-64 Identity = 141/207 (68.12%), Postives = 158/207 (76.33%), Query Frame = 1
Query: 439 GMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKPQGSSKRSRSKVAPP----AEKADSDKVSDDKTINNCCKXXXXXXXXXXXXXXXXXXXXXXDLTFADVSEP-QWEGDSDTFNLHKYPSYEIDWDSL 1044
G+P KPTKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRH GS +GG FGEYKPLHSSVDAKL+AIC+ +AE QKQ K+ K SSK+ KV+ P KA+ + VS + PVT ES+ GSSPLSDLTFAD EP QW ++TF+L KYPSYEIDWDS+
Sbjct: 143 GVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQKQDKSTK---SSKKREKKVSSPDLSEKVKAEENSVSIGGS-----------PPVTEFEESTAGSSPLSDLTFADPEEPPQW---NETFSLEKYPSYEIDWDSI 332
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: RA213_ARATH (Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana OX=3702 GN=RAP2-13 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.934e-46 Identity = 118/217 (54.38%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 406 LGTKPIPMKHVGM-PLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKPQGSSKRSRSKVAPPAEKADSDKVSDDKTINNCCKXXXXXXXXXXXXXXXXXXXXXXDLTFADVSE---PQWEGDSDTFNLHKYPSYEIDWDSL 1044
L KP+ MK G KPTKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP+LRH EY+PL SSVDAKL+AIC+ LAE ++ + SS++ S VA + D + S SSPLS+LTF D E P W ++ L KYPSYEIDWDS+
Sbjct: 62 LSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHN--------DEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLPEEDYSSAGSSPLLTESYG-------------SGGSSSPLSELTFGDTEEEIQPPWNENA----LEKYPSYEIDWDSI 253
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 GN=ERF060 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.493e-45 Identity = 143/358 (39.94%), Postives = 185/358 (51.68%), Query Frame = 1
Query: 1 MAAMMGFYSSTEFQLPSDPFRGELMEVLEPFMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYSNNCSASMTHAFADGLSQSNTQNIIGFAQGQPTSLLGLNHLTPXXXXXXXXXXXXXXXXXXNPNTLNFLGTKPIPMKHVGMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKPQGSSKRSRSKVAPPAE----------KADSDKVSDDKTINNCCKXXXXXXXXXXXXXXXXXXXXXXDLTFADVSEPQWEGDSDTFNLHKYPSYEIDWDSL 1044
MAA+ F S+T DPF+ ELM+ L+P+ +N S+S T+ SNT + GF Q T+ LGLN LTP QI QIQ Q+ + +PN L KP+PMK+ + KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAA+AYD AAYKLRG+FARLNFP RH+ GGG + PLHSSVDAKLQ IC+ L +K + P S +++ PP ++D + SD+ + + + TF D S+ ++ + +F L K+PS EIDWD++
Sbjct: 1 MAAIDMFNSNT------DPFQEELMKALQPYT-----------------------------------TNTDSSSPTY--------SNT--VFGFNQ---TTSLGLNQLTPYQIHQIQNQLNQRRNII-SPN----LAPKPVPMKN----MTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGG-SCFNPLHSSVDAKLQEICQSL---RKTEDIDLPC-----SETELFPPKTEYQESEYGFLRSDENSFSDESHVESSSPESGIT-------------------TFLDFSDSGFD-EIGSFGLEKFPSVEIDWDAI 266
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana OX=3702 GN=ERF056 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.349e-36 Identity = 114/251 (45.42%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 307 LGLNHLTPXXXXXXXXXXXXXXXXXXNPNTLNFLGTKPIPMKHVGMPLKPTK-LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQK----QGKTEKPQGSSKRSRSKVAPPAEKADSDKVSDDKTINNCCKXXXXXXXXXXXXXXXXXXXXXXDLTFADVSEPQWEGDSDTFNLHKYPSYEIDWDSL 1044
LGLN LTP QI QIQ Q+ + +T++ L I MK++ TK LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+TAE+AALAYD+AA++LRGD A+LNFPNL H+ + PL SSVD KLQAIC+ L + ++ +T++ S ++++ P KA+ + N E+ S T+ + S+ SD TF D S+ ++E + +F L K+PS EIDWD++
Sbjct: 23 LGLNQLTPYQIHQIQNQLNHRR------STISNLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHE---------DMNPLPSSVDTKLQAICKSLRKTEEICSVSDQTKEYSVYSVSDKTELFLP--KAELFLPKREHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFE-EIGSFGLRKFPSVEIDWDAI 255
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana OX=3702 GN=ERF057 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.437e-36 Identity = 116/256 (45.31%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 298 TSLLGLNHLTPXXXXXXXXXXXXXXXXXXNPNTLNFLGTKPIPMKHVGMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHS-SVDAKLQAICEG----LAEMQKQGKTEKP-QGSSKRSRSKVAPPAEKADSDKVSDDKTINNCCKXXXXXXXXXXXXXXXXXXXXXXDLTFADV-SEPQWEGDSDTFNLHKYPSYEIDWDSL 1044
T +GLN LTP+QI QIQT++ ++ + + L KP MK + + KP KLYRGVRQR WGKWVAEIRLPKNRTRLWLGTF+TA+EAALAYD+AA+K+RGD ARLNFP++ Q G YK + S S++AK+++IC L +++KQ KTE+ G SK +K + I C GSSP SD+T D S+ E +S LHKYPS EIDWD++
Sbjct: 55 TGPIGLNQLTPTQILQIQTELHLRQNQSRRRAGSHLLTAKPTSMKKIDVATKPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQ--------GHYKQILSPSINAKIESICNSSDLPLPQIEKQNKTEEVLSGFSK--------------PEKEPEFGEIYGC---------------GYSGSSPESDITLLDFSSDCVKEDESFLMGLHKYPSLEIDWDAI 273
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana OX=3702 GN=ERF055 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 8.590e-35 Identity = 86/131 (65.65%), Postives = 97/131 (74.05%), Query Frame = 1
Query: 397 LNFL-----GTKPIPMKHVGMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQKQ-GKTEK 771
LNF+ G P G KP KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAEEAALAYD+AA+KLRGD ARLNFP LR+Q S GEY P+ ++VDAKL+AI LAE + Q GKTE+
Sbjct: 115 LNFIEPSQPGFMTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAI---LAEPKNQPGKTER 242
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana OX=3702 GN=ERF062 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.744e-24 Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 412 TKPIPMK----HVGMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSS 660
TK PMK V PTKLYRGVRQRHWGKWVAEIRLP+NRTR+WLGTF+TAE+AA+AYD AAY LRG+FA LNFP+L+HQ S
Sbjct: 210 TKTQPMKSKTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKHQLKS 296
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 GN=ERF061 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.364e-23 Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 439 GMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHQGSSVG-GGFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKPQGSSKRSRS 801
G K KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT+DTAE AA AYD+AAYKLRG++ARLNFPNL+ +G G + L ++VD K+Q+IC+ + + + + + + SS + S
Sbjct: 127 GRVTKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADS 248
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana OX=3702 GN=ERF053 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.229e-20 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 1
Query: 445 PLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNL 642
P TKLYRGVRQRHWGKWVAEIR P+NRTRLWLGTFDTAEEAA+AYD+ A+KLRG+ ARLNFP L
Sbjct: 180 PFSATKLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPEL 245
BLAST of Vigun09g175000.1 vs. DB:Swiss
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana OX=3702 GN=ERF054 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.534e-16 Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 445 PLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFP 636
P TKLYRGVRQR WGKWVAEIR P++R RLWLGTFDTAEEAA+AYD+ A+KLRG A LNFP
Sbjct: 136 PYIATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199 The following BLAST results are available for this feature:
BLAST of Vigun09g175000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g175000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g175000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g175000.1; organism=Vigna unguiculata; type=mRNA; length=1864bpback to top protein sequence of Vigun09g175000.1_Vu_IT97K-499-35_v1.1 >Vigun09g175000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g175000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g175000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=349bpback to top mRNA from alignment at Vu09:34633479..34635342+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g175000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g175000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g175000.1; organism=Vigna unguiculata; type=mRNA; length=1864bp; location=Sequence derived from: Vu09:34633479..34635342+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:34633479..34635342+ >Vigun09g175000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g175000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g175000.1; organism=Vigna unguiculata; type=CDS; length=1047bp; location=Sequence derived from: Vu09:34633479..34635342+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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