Vigun09g195900.1

Transcript Overview
NameVigun09g195900.1
Unique NameVigun09g195900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1620
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:37039779..37043507 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL377Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL556Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL352Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0609Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL697Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL1206Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0127Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0370Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0770Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1022Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhvuL188Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL158Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL398Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL573Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL419Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL602Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuL321Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL654Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL606Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL335Cicer arietinum
carvuL418Cicer arietinum
carvuL665Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL447Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL610Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL666Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR761Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR801Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR811Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL309Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL256Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_24208Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.02G074600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.009G106500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_011414Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014644159.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_32938Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058924912.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_02G00797.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_01883Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr09.739Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg55594.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_12548Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_06830.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.2g192400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_14638.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058929132.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat05G0077300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va04G061200.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004501129.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigan.02G097100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cr_12067.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Tiffany.R1.2g155600.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g195900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g195900Vigun09g195900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g195900.1Vigun09g195900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g195900.1_Vu_IT97K-499-35_v1.1Vigun09g195900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g195900.1.v1.1.CDS.6Vigun09g195900.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g195900.1.v1.1.CDS.5Vigun09g195900.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g195900.1.v1.1.CDS.4Vigun09g195900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g195900.1.v1.1.CDS.3Vigun09g195900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g195900.1.v1.1.CDS.2Vigun09g195900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g195900.1.v1.1.CDS.1Vigun09g195900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g195900.1.v1.1.three_prime_UTR.1Vigun09g195900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g195900.1.v1.1.five_prime_UTR.1Vigun09g195900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_BOVIN (Coiled-coil domain-containing protein 25 OS=Bos taurus OX=9913 GN=CCDC25 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.249e-73
Identity = 127/199 (63.82%), Postives = 157/199 (78.89%), Query Frame = 1 
Query:    1 MVFYFKARP-EAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +    +  YTI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+RLHKG+ I+ + + +L DCA LVKANSIQG K+NNV+VVYTPWSNLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTK+ER PDL+AE+E  +  ER E+K Q++E KRRE+ E   K    ELRSY  LM  ENM+SN+
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDHEERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQ 199
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_PONAB (Coiled-coil domain-containing protein 25 OS=Pongo abelii OX=9601 GN=CCDC25 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 2.959e-73
Identity = 127/199 (63.82%), Postives = 156/199 (78.39%), Query Frame = 1 
Query:    1 MVFYFKARP-EAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +    +  YTI+MG DK+ENE+LIK+G+PEDIWFHVDK+SSAHVY+RLHKG+ I+ + + +L DCA LVKANSIQG K+NNV+VVYTPWSNLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTKVER PDL AE+E  +  ER E+K Q++E KRRE+ E   K    ELRSY  LM  ENM+SN+
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQ 199
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_HUMAN (Coiled-coil domain-containing protein 25 OS=Homo sapiens OX=9606 GN=CCDC25 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 2.959e-73
Identity = 126/199 (63.32%), Postives = 156/199 (78.39%), Query Frame = 1 
Query:    1 MVFYFKARP-EAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +    +  YTI+MG DK+ENE+LIK+G+PEDIWFHVDK+SSAHVY+RLHKG+ I+ + + +L DCA LVKANSIQG K+NNV+VVYTPWSNLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTKVER PDL AE+E  +  ER E+K Q++E K+RE+ E   K    ELRSY  LM  ENM+SN+
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREMDELRSYSSLMKVENMSSNQ 199
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_MOUSE (Coiled-coil domain-containing protein 25 OS=Mus musculus OX=10090 GN=Ccdc25 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.426e-72
Identity = 124/199 (62.31%), Postives = 155/199 (77.89%), Query Frame = 1 
Query:    1 MVFYFKARP-EAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +    +  YTI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+RL KG+ I+ + + +L DCA LVKANSIQG K+NNV+VVYTPWSNLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTK+E+ PDL AE+E  +  ER E+K Q++E KR+E+ E   K    ELRSY  LM  ENM+SN+
Sbjct:    1 MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQEMKRKEKEEMKKKREMDELRSYSSLMKVENMSSNQ 199
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_DANRE (Coiled-coil domain-containing protein 25 OS=Danio rerio OX=7955 GN=ccdc25 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 6.101e-70
Identity = 118/198 (59.60%), Postives = 157/198 (79.29%), Query Frame = 1 
Query:    1 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +   +  +TI+MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+R+ KG TID + + +L DC QLVK NSIQG K+NN+++VYTPWSNLKKTA MD+GQ+GFH  K V+ V VEK+INEIVNRL KTK ER PDL AE+E+ +  ER E+K Q++E+K++E+ E   K+   +L++Y  LM ++NMT+N+
Sbjct:    1 MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTIDDIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVAVEKKINEIVNRLEKTKEERYPDLAAEKESRDREERNEKKAQIQEQKKKEKEEVKKKKEMEDLKNYTSLMKSDNMTTNE 198
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_XENTR (Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis OX=8364 GN=ccdc25 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.899e-69
Identity = 123/198 (62.12%), Postives = 158/198 (79.80%), Query Frame = 1 
Query:    1 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNK 594
            MVFYF +   +  YT++MG DK+ENE+LIKYG+PEDIWFHVDK+SSAHVY+RL K QTI+ + + +L DCAQLVKANSIQG K+NN++VVYTPW+NLKKTA MD+GQ+GFH  K V+T+ VEK +++IVNRL KTK ER PDL AE+EA +  ER E+K Q++E KR+E+ E   K+   ELRSY  LM +ENM+SN+
Sbjct:    1 MVFYFTSNVISPPYTMYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKDQTIEDIPKEVLLDCAQLVKANSIQGCKMNNINVVYTPWANLKKTADMDIGQIGFHRQKDVKTMTVEK-VSKIVNRLEKTKDERFPDLAAEKEARDREERNEKKAQIQEIKRKEKEEMKKKKEMDELRSYSSLMKSENMSSNQ 197
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: CCD25_DICDI (Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium discoideum OX=44689 GN=ccdc25 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.198e-55
Identity = 102/216 (47.22%), Postives = 151/216 (69.91%), Query Frame = 1 
Query:    1 MVFYFK-ARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRSYKGLMVAENMTSNKQIASGSKSLQELEEDFM 645
            MV YFK   PE   Y  +MG+DKFENE+LIKYG+PED+WFHV+ +SSAHVY+RL KG+T + +   +LE+C QLVK NSIQG K  +VD+VYTPW+NLKKTA M+ GQV +HN + V+ VR  ++ ++I+NR+ KT+ +R+ DL  ER++ + +ER E++++  EK+R E+    +K++  +++ Y  +M  +NM  NK   +        E+DFM
Sbjct:    1 MVLYFKLIDPE---YICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETWNDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYVRNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEKRRAEKKAYEEKQKMEDIKKYTSIMKTDNMKFNKYNPTD-------EDDFM 206
[Close]
BLAST of Vigun09g195900.1 vs. DB:Swiss
Match: JLP2_YEAST (Protein JLP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=JLP2 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 8.293e-35
Identity = 62/143 (43.36%), Postives = 93/143 (65.03%), Query Frame = 1 
Query:    1 MVFYFKARPE--AGDYTIFMGLDKFENEELIKYGFPE--DIWFHVDKMSSAHVYVRLHKGQ-TIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVE 414
            MV++++++P   +  Y I MG DKFEN+ LIK+ + E   +WFH DK SS HVY++L   + TID + + ++ DC QL K+ SIQGNK+    ++ TPW NL+K   M+ G+V F + +  R +    R N+I+NRL KT+VE
Sbjct:    1 MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPNEKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQCRKMECGARDNKILNRLAKTRVE 143
The following BLAST results are available for this feature:
BLAST of Vigun09g195900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
CCD25_BOVIN1.249e-7363.82Coiled-coil domain-containing protein 25 OS=Bos ta... [more]
CCD25_PONAB2.959e-7363.82Coiled-coil domain-containing protein 25 OS=Pongo ... [more]
CCD25_HUMAN2.959e-7363.32Coiled-coil domain-containing protein 25 OS=Homo s... [more]
CCD25_MOUSE9.426e-7262.31Coiled-coil domain-containing protein 25 OS=Mus mu... [more]
CCD25_DANRE6.101e-7059.60Coiled-coil domain-containing protein 25 OS=Danio ... [more]
CCD25_XENTR1.899e-6962.12Coiled-coil domain-containing protein 25 OS=Xenopu... [more]
CCD25_DICDI4.198e-5547.22Coiled-coil domain-containing protein 25 homolog O... [more]
JLP2_YEAST8.293e-3543.36Protein JLP2 OS=Saccharomyces cerevisiae (strain A... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..171
IPR008532NFACT, RNA-binding domainPFAMPF05670NFACT-R_1coord: 1..112
e-value: 2.4E-43
score: 147.2

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g195900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g195900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g195900.1; organism=Vigna unguiculata; type=mRNA; length=1620bp
TCCTGTTATATATAATTTGTGTCTTCTGTTATTTTGGTGAAATTTGTTAC
CACAGTTGAAGTTTATTAGAATCTGGAAATTTCGTGGCAGAAATTGTATT
TTGTTGTACCCACCACAACACAACGGCGCATTTGGGTATAGTAAAAGAAG
AAAGGTTCGGTGTTTATGATTTACGCAGCGATTCGTGTAGCGAAAGCAAT
TCCCCAATTTTGATTTGTTTTGAGGAACACAACAGTTCCCATTCAGAACC
CTAACCTAACCGCATACCCTTTCTTCAACCTCTGCGTCCAAACAACGCCA
CACACGCACGATGGTGTTCTACTTCAAGGCGCGTCCTGAAGCCGGCGATT
ACACTATCTTCATGGGTCTCGACAAGTTCGAGAACGAGGAGCTCATCAAA
TACGGTTTTCCCGAAGATATCTGGTTCCATGTTGATAAAATGTCTTCAGC
CCATGTGTATGTCCGGCTGCACAAAGGCCAGACTATTGATGGCATGAGTG
AAGGTTTACTGGAAGACTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAA
GGGAATAAAGTGAACAATGTTGATGTTGTTTACACTCCATGGTCTAATTT
AAAGAAAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTTCACAATTCAA
AAATGGTTCGAACAGTGAGAGTTGAGAAGAGGATAAATGAGATTGTTAAC
AGGCTAAACAAGACAAAAGTGGAAAGGAAACCTGATTTGAAAGCTGAGCG
AGAAGCAGTTAATGCAGCTGAACGAGCTGAGAGAAAACAACAATTAAGAG
AAAAGAAACGCCGTGAGGAATTGGAAAGACTCGACAAGGAGAGACAAGCA
GAGCTTCGGAGCTACAAGGGTTTGATGGTTGCTGAAAATATGACATCAAA
CAAACAAATTGCATCTGGAAGCAAATCATTGCAGGAACTGGAGGAGGATT
TCATGTAAGCATTTGATTATTGGGTTTTAGGCAGATGAGTGGCGATCAAC
TTGCTATCTGGCAGATCTATATATTGATTACTTCTGGAATCTGAAGCTGC
ATTATGTTATCTTTCTTGAAGAAACCAAGTAATGTGTTTACCCAACTGTG
ATCAGATAGAGAAAAAGAGGGGGGTGGGGGGAACGGAATGATTGGACTAT
GTTCTTCGCAAAGGCAATGTACCTTATCTATAACCTTGCTTGGGACAATG
GTTTTTATATTATTGTTCTCACAGTCGAGTCAAAAACTGAAATATTTCTT
GCTACATTTAGTGGCAGTTTACGCTTGGCTCGTTTAGAATTTAGTTTCCC
CTTTTTAATTTTATTTTCCCCGCTTGCGAAATTGTTGCAAAATGATCTCC
AGTGTTGATGGTACGGGCAGAAAAGCCTTTTATTGTTGATATTAAAACTA
ATAGAACACCATTTTAGCTTGAGACCGTACCCAGTAAGGTTTGTTCACTA
GCATTGGTATATGAATGTTTGTATGTTGCCCATGAAATCTTGTAACAGAA
CGATGATATTTTGTTCGTCTGCACATTCGTTTCTAAGTTGATGATAAGGT
AATAATAGTCAATTATAGTAATATTATAGCTGTATTTACACTTTCATAAG
ATAAGGGCTGTATAAAGATA
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protein sequence of Vigun09g195900.1_Vu_IT97K-499-35_v1.1

>Vigun09g195900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g195900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g195900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=216bp
MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVY
VRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKT
ASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKAEREAV
NAAERAERKQQLREKKRREELERLDKERQAELRSYKGLMVAENMTSNKQI
ASGSKSLQELEEDFM*
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mRNA from alignment at Vu09:37039779..37043507-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g195900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g195900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g195900.1; organism=Vigna unguiculata; type=mRNA; length=3729bp; location=Sequence derived from: Vu09:37039779..37043507- (Vigna unguiculata
TCCTGTTATATATAATTTGTGTCTTCTGTTATTTTGGTGAAATTTGTTAC
CACAGTTGAAGTTTATTAGAATCTGGAAATTTCGTGGCAGAAATTGTATT
TTGTTGTACCCACCACAACACAACGGCGCATTTGGGTATAGTAAAAGAAG
AAAGGTTCGGTGTTTATGATTTACGCAGCGATTCGTGTAGCGAAAGCAAT
TCCCCAATTTTGATTTGTTTTGAGGAACACAACAGTTCCCATTCAGAACC
CTAACCTAACCGCATACCCTTTCTTCAACCTCTGCGTCCAAACAACGCCA
CACACGCACGATGGTGTTCTACTTCAAGGCGCGTCCTGAAGCCGGCGATT
ACACTATCTTCATGGGTCTCGACAAGTTCGAGAACGAGGAGCTCATCAAA
TACGGTTTTCCCGAAGATATCTGGTAACCCCAACGTTCATTCTTATCTTC
GTTCTCTCTGTCTCGCTCTCTTTTTTTCAATTTCTTGATTTCTTTTTCGT
TTCCTCAAATTCTCTGCTTCCGGTAGAAATTCTACTCTTGGCCTTGGTCT
TGAACGCGATTTGATTTGATTACCAGTTGTGTCGTTTGTGTAGCAGAGGT
TTCTGTGCTGTTTGGCCTCGATTTTTGCATCACTAATTGAAAGAGAAGGA
TTGTCGATTTTTGTGGTTAATACTCAATATTATTACCGTGCAGTAGTCGG
GTTTGTTTAGAATTGGGATTCAACCAATTCTGTTGTTTTAAGAACACTGT
ATTTATTTTGTCCGGGGGACGAAAATTGAGTTTTTTTCGTGTAAGGGGCA
ACCCATTTTGGGGATGTGATGTTGCTTGTGGCTATTTGTTCTGGAAGATA
GTAATTTCTTCACTCGTTTTTTCTTAAGTTTGTTTCCTTTAATGGCGACT
GCTTTCTTTTTGTTTTGATTTAATGCTTGCTGAGATAGTTGTGTTGTTTT
TCTTTTCATTCACCGAGGTTCTTTATTGACAAAGTTTGTTTATTGTAGGT
TCCATGTTGATAAAATGTCTTCAGCCCATGTGTATGTCCGGCTGCACAAA
GGCCAGACTATTGATGGCATGAGTGAAGGTTTACTGGAAGACTGTGCTCA
GCTTGTCAAAGCAAATTCAATTCAAGGTGAAAGCCTGACAGTATATTCCT
CTGGTTTATTAGTTTAATTGATTTAGCTGCCAAATTTATGTGTTATTGCA
AAAGCTTTTAAATAGCATGGTACTTTATCCTTATTAAGGTTTCATTAGTT
GTGGTATTGTTTGGATTATTTTTTCCTTAAGCACTTATAGGAAAAGAAAA
TGAGAAGGTAAAATGAATTAAGTCTCCCCTATAAGTTAAAATCAGCTTAT
GCATTTAACTTTTATAGAAACTCATTCATTTCATTTCTTCAGAATCTAAG
GTGCATAAGTTGATTTTAGTTTATAGGAGAAGTTCAATGTATTGTACCTT
TCTTCTTTTCTGCTCCTATGAGTGTTTACAGAGAGATTTATCCAAACAGG
ATCTATGTTTACAAATGGAATTCGGTAAGGCTATTCTCTTACTATTTCAA
AAACATATATGCAGTTATTATTTGACTTTCATATGTATCTTTCTAATTGC
TCGTACTATGTGCGTAGTGCTTATCATTTTTCTTTATTCATGGCAGGGAA
TAAAGTGAACAATGTTGATGTTGTTTACACTCCATGGTCTAATTTAAAGA
AAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTTCACAATTCAAAAATG
GTGAATGTTTTTCACAGTTGAATCTTTTTAATATTCTTTCTCACCTTTTT
AGTTCTTTGTGTTTTTTATTTTTGTTTTTCAGAGTGGGTGGGTGGGTAGT
TAAATGGTTGAGCTTCCATTTTAAGAGAGTATCATTTTCTTGTTTTCGTG
CATTTTAGGTTCGAACAGTGAGAGTTGAGAAGAGGATAAATGAGATTGTT
AACAGGCTAAACAAGACAAAAGTGGAAAGGAAACCTGATTTGAAAGGTAC
TTAATAAGTTTGCTTCATTTCTTTTGAGTAATATTTTCTTTAGAACATTT
AAGTTTGGATAGTAAAAATGCTAATTTTTTTCTGGACGAGGAGGCAAATG
GTGCACACCTTTATGTTTTATAGGTTATCTTGGCTATTTACCCTTTATGG
TGTATCATGTATAATATTTTTACAAATCTGATTTGGTACGTGTGCATCAG
CTGAGCGAGAAGCAGTTAATGCAGCTGAACGAGCTGAGAGAAAACAACAA
TTAAGAGAAAAGGTGAGTATTGTTCTTTTTCTTTTCTTAATTCATGCACA
CAACAAAATCATTGCTGTCACTAACCTCAGTATTTAAGCATAGTCGATTA
TATTGATAGACTTGGATTTGAAAGTATACTTTAATTTTGATGGATTGGCA
GTGAGAATATGTTGTACGCTTTCAGCCAACCTCATCATTTAGTTAGCTTA
ACTTCTCGAGTAGTTCGTAACTTATTAAGCTCATCTGGTAATTTGTTATT
ATATCAGTGGATGTAATTGAAATATTTGTATACTGTTGGAGCATCAACCA
CCATGTTGCTTACCTTTCTGATTCATAGTTTTTAAAATTATCATCTTTGT
TTGTCCACGTGCACCAATTGAGTTATGTGTCACTTTTTAGCTTTCTTCCC
TTAGGGTTTTGTCTGTTAACTTTGTTAAGGACTAGAAGATCCTGCTCAAT
GTTTCTAGGAAGTCTGACTCTGTAAAAAATGTATGATGAAAATCAAACGT
CTGCTTTGAGCTGTAGCATAGGTGAAAGTTAATTACTATACTTTAATTGA
TACGTTATATTGGTGCCTTCCTGCTTGTTTATGATTTCAATCTTTCTTCT
AAGACACTATGAAAACATTTTATTGAATATTTTTTTTCATTCACCCACAT
GTTTTTCCATTCAGAAACGCCGTGAGGAATTGGAAAGACTCGACAAGGAG
AGACAAGCAGAGCTTCGGAGCTACAAGGGTTTGATGGTTGCTGAAAATAT
GACATCAAACAAACAAATTGCATCTGGAAGCAAATCATTGCAGGAACTGG
AGGAGGATTTCATGTAAGCATTTGATTATTGGGTTTTAGGCAGATGAGTG
GCGATCAACTTGCTATCTGGCAGATCTATATATTGATTACTTCTGGAATC
TGAAGCTGCATTATGTTATCTTTCTTGAAGAAACCAAGTAATGTGTTTAC
CCAACTGTGATCAGATAGAGAAAAAGAGGGGGGTGGGGGGAACGGAATGA
TTGGACTATGTTCTTCGCAAAGGCAATGTACCTTATCTATAACCTTGCTT
GGGACAATGGTTTTTATATTATTGTTCTCACAGTCGAGTCAAAAACTGAA
ATATTTCTTGCTACATTTAGTGGCAGTTTACGCTTGGCTCGTTTAGAATT
TAGTTTCCCCTTTTTAATTTTATTTTCCCCGCTTGCGAAATTGTTGCAAA
ATGATCTCCAGTGTTGATGGTACGGGCAGAAAAGCCTTTTATTGTTGATA
TTAAAACTAATAGAACACCATTTTAGCTTGAGACCGTACCCAGTAAGGTT
TGTTCACTAGCATTGGTATATGAATGTTTGTATGTTGCCCATGAAATCTT
GTAACAGAACGATGATATTTTGTTCGTCTGCACATTCGTTTCTAAGTTGA
TGATAAGGTAATAATAGTCAATTATAGTAATATTATAGCTGTATTTACAC
TTTCATAAGATAAGGGCTGTATAAAGATA
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Coding sequence (CDS) from alignment at Vu09:37039779..37043507-

>Vigun09g195900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g195900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g195900.1; organism=Vigna unguiculata; type=CDS; length=648bp; location=Sequence derived from: Vu09:37039779..37043507- (Vigna unguiculata
ATGGTGTTCTACTTCAAGGCGCGTCCTGAAGCCGGCGATTACACTATCTT
CATGGGTCTCGACAAGTTCGAGAACGAGGAGCTCATCAAATACGGTTTTC
CCGAAGATATCTGGTTCCATGTTGATAAAATGTCTTCAGCCCATGTGTAT
GTCCGGCTGCACAAAGGCCAGACTATTGATGGCATGAGTGAAGGTTTACT
GGAAGACTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAAGGGAATAAAG
TGAACAATGTTGATGTTGTTTACACTCCATGGTCTAATTTAAAGAAAACT
GCTTCAATGGATGTTGGTCAAGTTGGTTTTCACAATTCAAAAATGGTTCG
AACAGTGAGAGTTGAGAAGAGGATAAATGAGATTGTTAACAGGCTAAACA
AGACAAAAGTGGAAAGGAAACCTGATTTGAAAGCTGAGCGAGAAGCAGTT
AATGCAGCTGAACGAGCTGAGAGAAAACAACAATTAAGAGAAAAGAAACG
CCGTGAGGAATTGGAAAGACTCGACAAGGAGAGACAAGCAGAGCTTCGGA
GCTACAAGGGTTTGATGGTTGCTGAAAATATGACATCAAACAAACAAATT
GCATCTGGAAGCAAATCATTGCAGGAACTGGAGGAGGATTTCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008532NFACT_RNA-bd