Vigun09g196800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: RD22_ARATH (BURP domain protein RD22 OS=Arabidopsis thaliana OX=3702 GN=RD22 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.217e-108 Identity = 190/387 (49.10%), Postives = 234/387 (60.47%), Query Frame = 1 Query: 10 LLLPIFALLSVAVVVTYGA-LSPEVYWKSVLPNTPIPKAVTHILHPDWVEEKS----------------------TAVNVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKGKP-----------------------VYVNV----SPFVYKYAATETQLHDDTKVALFFKENDLHYGKKLDLHFTPS---SNQATFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGK-NVAVLSTEVDQETG-LQQYTI-APGVKKVSGDNAVVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVW 1002
+ LP+ LL +VV A L+PE YW + LPNTPIP ++ ++L D+ +EKS TAVNVGKGGV V TG+ GG G H GKP +YV V +PFVY YAA ETQLHDD ALFF E DL GK++++ F + FLPR A+++PF S K ++ +FS++ SEEA ++K T+ ECE + GEEKYCATSLESMVDFS SKLGK +V +STEV ++ +Q+Y I A GVKK+S D +VVCHKQ YP+AVFYCHK T Y+VPLEG NG+R KAVAVCH +TS WNP HLAF+VLKVKPGTVPVCHFLPE HVVW
Sbjct: 3 IRLPLICLLGSFMVVAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP3 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 7.634e-94 Identity = 140/246 (56.91%), Postives = 176/246 (71.54%), Query Frame = 1 Query: 286 KGKPVYVNVSPFVYKYAATETQLHDDTKVALFFKENDLHYGKKLDLHFTPSSNQATFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLG-KNVAVLSTEVDQE-TGLQQYTIAPGVKKVSG---DNAVVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQ 1008
+GKPV+VNV+PF+Y YAATETQLHDD VALFF E DLH GK + +HFT ++ FLPR AD++PFSS KV ++ ++FS+KP S EA + TL +CE +GE K CATSLESMVDF+TS LG +V ST V +E + Q+YT+ + +G D V CH + Y YAVF CH T TR Y+V + G +G V+AVAVCH DT+ WNPKH+AF+VLKVKPGTVPVCHFLP+DHVVW +
Sbjct: 182 RGKPVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVWTR 427
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP5 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 9.260e-82 Identity = 135/324 (41.67%), Postives = 187/324 (57.72%), Query Frame = 1 Query: 55 TYGALSPEVYWKSVLPN-TPIPKAVTHILHPDWVEEKSTAVNVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKGKPVYVNVSPFVYKYAATETQLHDDTKVALFFKENDLHYGKKLDLHFTPSSNQATFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLG-KNVAVLSTEV---DQETGLQQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 1011
++ A+SPE YW+S+LP+ TP+P +++ +L + S AV + K +G V + P +Y AA++ Q D + LFF E +L K + LHF FLPR AD++PFSS + ++ A+F ++P S +A++VKNTL ECE + KGE+K CATSLESMVDF S LG +++ ST + D +T Q+YT+ + + CH +SYPYAVF CH TE TR Y L G +G V+AVAVCHTDT++WNPKH AF+VL VKPGTVPVCHF+ D VVW ++
Sbjct: 36 SHAAMSPEQYWRSILPDSTPMPISISQLLGDGY--PYSPAVGLPK---------------------------------RGDRVQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVWTRR 323
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP17 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.690e-67 Identity = 119/242 (49.17%), Postives = 160/242 (66.12%), Query Frame = 1 Query: 325 YKYAATET-QLHDDTKVALFFKENDLHYGKKLD--LHFTP--SSNQATFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKN------VAVLSTEVDQETGLQQYTIAPGVKKVSGDNAVV-CHKQSYPYAVFYCHKTE-TTRTYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 1011
YK + ET +L D +ALFF E +L GKK++ LHF ++ + FLPR ADSIPFSS ++ ++ +F ++P S++A + TL +CE + KGE+K CATSLES+VDF TS G + VLS V+ + Q YT++ GV++++G ++ CH +SYPYAVF CH TE TTR Y L G +G V+AVAVCHTDTS WNP+H AF VL VKPGTVPVCHF+ D VVW ++
Sbjct: 344 YKSSVLETPELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVS-GVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVWTRR 584
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum OX=4565 GN=RAFTIN1B PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.134e-55 Identity = 93/216 (43.06%), Postives = 130/216 (60.19%), Query Frame = 1 Query: 376 LFFKENDLHYGKKLDLHFTPSSNQA-TFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKN--VAVLSTEVDQETGLQQYTIAPGVKKVSGDNA-VVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGI-RVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQ 1008
+FF E + G++L HF P++ A FLPRQVADS+PF++ + + A F I +S ++ TL CE +I GE K+CATSLE++V+ + LG V ST LQ YT+ V+ V G V CH ++YPY V+ CH T +R Y+V +EGA G V AVCHTDTS WNP+H++F++L KPG PVCH +P H++W +
Sbjct: 141 VFFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVV-AVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAK 355
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP6 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.290e-53 Identity = 98/222 (44.14%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 358 DDTKVALFFKENDLHYGKKLDLHFTPSSNQATFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLG-KNVAVLSTEVDQE--TGLQQYTIAPGVK--KVSGDNAVVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQ 1008
+DT +FF E DL G K+ LHFT ++ A LPR ADS+PF+S K+ ++ ++ S+ S A+ +++TL ECE GE K CATSLESMV+F+ S LG ++V +STEVD+ T Q Y + V+ VSG + V CH +Y YAVF CH T L GA+G + +A+A CHTD + + A++ L V PG+VPVCHFLP+D ++WV+
Sbjct: 21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVE-AVRPVPVSGGDMVACHGMAYAYAVFGCHTTTAAAYTVT-LAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWVR 238
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum OX=4565 GN=RAFTIN1A PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 4.002e-53 Identity = 92/216 (42.59%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 376 LFFKENDLHYGKKLDLHFTPSSNQA-TFLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKN--VAVLSTEVDQETGLQQYTIAPGVKKVSGDNA-VVCHKQSYPYAVFYCHKTETTRTYSVPLEGANGIRVKAVA-VCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQ 1008
+FF E + GK+L F P++ A FLPRQVADS+PF++ + V A F + +S ++ TL CE +I GE K+CATSLE++V+ + LG V ST LQ YT+ V+ V G V CH ++YPY V+ CH T +R Y V +EGA G +A VCHTDTS WNP+H++F++L KPG PVCH +P H++W +
Sbjct: 168 VFFHEEAVRVGKRLPFRFPPATPAALGFLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVR-SVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAK 382
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BNM2C_BRANA (BURP domain-containing protein BNM2C OS=Brassica napus OX=3708 GN=BNM2C PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.738e-51 Identity = 93/230 (40.43%), Postives = 137/230 (59.57%), Query Frame = 1 Query: 358 DDTKVALFFKENDLHYGKKLDLHFTPSSNQAT--FLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKN--VAVLSTEV---DQET---GLQQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTET-TRTYSVPLEGANGIR-VKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 1011
+D + +FFK +DL G KL ++F + + L RQ AD IPFS + ++ + FSI +S + +K TL C+ +I+GE K+C TSLESM+D + + N + V++T+V DQ L YT A K++ G + CH+ YPY V+YCH ++ T+ + V L +GI+ V AVCH DTS WN H+AF+VLK++P + PVCHF P D++VWV K
Sbjct: 52 EDPTMYMFFKISDLKLGTKLPIYFNKNDLRKVPPLLTRQEADLIPFSESNLDFLLNHFSISKDSPQGEAMKETLQRCDFKAIEGEYKFCGTSLESMLDLAKKTIASNADLKVMTTKVMVPDQNRISYALHNYTFAEVPKELDGIKVLGCHRMPYPYVVYYCHGHKSGTKVFEVNLMSDDGIQLVVGPAVCHMDTSMWNADHVAFKVLKIEPRSAPVCHFFPLDNIVWVSK 281
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: BNM2A_BRANA (BURP domain-containing protein BNM2A OS=Brassica napus OX=3708 GN=BNM2A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.138e-50 Identity = 93/230 (40.43%), Postives = 137/230 (59.57%), Query Frame = 1 Query: 358 DDTKVALFFKENDLHYGKKLDLHFTPSSNQAT--FLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKN--VAVLSTEV---DQET---GLQQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTET-TRTYSVPLEGANGIR-VKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 1011
+D + +FFK +DL G KL ++F + + L RQ AD IPFS + ++ + FSI +S + +K TL C+ +I+GE K+C TSLESM+D + + N + V++T+V DQ L YT A K++ G + CH+ YPY V+YCH ++ T+ + V L +GI+ V AVCH DTS WN H+AF+VLK++P + PVCHF P D++VWV K
Sbjct: 53 EDPTMYMFFKISDLKLGTKLPIYFNKNDLRKVPPLLTRQEADLIPFSESNLDFLLNHFSISKDSPQGKAMKETLKRCDFKAIEGEYKFCGTSLESMLDLAKKTIASNADLKVMTTKVMVPDQNRISYALHNYTFAEVPKELDGIKVLGCHRMPYPYVVYYCHGHKSGTKVFEVNLMSDDGIQLVVGPAVCHMDTSMWNADHVAFKVLKIEPRSAPVCHFFPLDNIVWVSK 282
BLAST of Vigun09g196800.1 vs. DB:Swiss
Match: USPL1_ARATH (BURP domain protein USPL1 OS=Arabidopsis thaliana OX=3702 GN=USPL1 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.376e-50 Identity = 92/230 (40.00%), Postives = 133/230 (57.83%), Query Frame = 1 Query: 358 DDTKVALFFKENDLHYGKKLDLHFTPSSNQAT--FLPRQVADSIPFSSNKVNDVFAKFSIKPESEEANIVKNTLNECEDTSIKGEEKYCATSLESMVDFSTSKLGKNV--AVLSTEV------DQETGLQQYTIAPGVKKVSGDNAVVCHKQSYPYAVFYCHKTET-TRTYSVPLEGANGI-RVKAVAVCHTDTSQWNPKHLAFEVLKVKPGTVPVCHFLPEDHVVWVQK 1011
DD + ++F NDL G KL ++F + Q L RQ AD IPF+ +K++ + FSI +S + +K TL C+ +I+GE K+C TSLES++D +G NV V++T+V L YT K++ G + CH+ YPYAV+YCH + +R + V L +G RV AVCH DTS W+ H+AF+VLK++P + PVCHF P D++VWV K
Sbjct: 51 DDPSLYMYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSITKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVPAQNSISYALHNYTFVEAPKELVGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDGRQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWVTK 280 The following BLAST results are available for this feature:
BLAST of Vigun09g196800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g196800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g196800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g196800.1; organism=Vigna unguiculata; type=mRNA; length=1298bpback to top protein sequence of Vigun09g196800.1_Vu_IT97K-499-35_v1.1 >Vigun09g196800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g196800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g196800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=338bpback to top mRNA from alignment at Vu09:37166203..37171118+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g196800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g196800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g196800.1; organism=Vigna unguiculata; type=mRNA; length=4916bp; location=Sequence derived from: Vu09:37166203..37171118+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:37166203..37171118+ >Vigun09g196800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g196800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g196800.1; organism=Vigna unguiculata; type=CDS; length=1014bp; location=Sequence derived from: Vu09:37166203..37171118+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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