Vigun09g197800.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 300/515 (58.25%), Postives = 400/515 (77.67%), Query Frame = 1 Query: 4 GVRELENRFVATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGLTLHQ 1548 G+RE+EN F+ L+ E KK+++ I+ LSQS+++ TKM+D CD + +DYAT +F + +PNVF YN+IIR THN + I +++++LR + L D+FTFPF+ KSCA + LG+QVH +CKFGP+ H +T+NALIDMY K DL A++VF+EM ERD +SWNSL+SG+ARLG+MK A+ F+ M +TIVSWT MI+GY GC+++A++ FREMQ+ GIEPDEIS+ISVLP+CAQLG+LE+GKWIH Y+E+ GFLK+T VCNALIEMY+KCG I++A+ LF QM KDVI WSTMI G A HG + AI F +MQ A V PNG+TF+G+LSAC H G+W+EGLRYFD+MR D+ +EP+IEHYGCL+D+L R G+L +A++ MPM+PDSKIW +LLSSCR NL++A+VAM+ L+ELEPE+ GNYVLLANIYA+LGKWE VS +RK+IR++ +KKTPG SLIEVNN+VQEFVSGD++KPF ++ ++L+ T HQ Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE--LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQ 517
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 5.616e-137 Identity = 208/514 (40.47%), Postives = 318/514 (61.87%), Query Frame = 1 Query: 22 NRFVATLRT-CSKIAELKKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVDYATLIFQSLDDPNVFSYNAIIRTCT---HNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPC--RTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGLTLH 1545 N FV +L+ + + LK+ H +++ L++ N K ++ C N GH+ YA +F PN + +N +IR + + HS+AI+V+R++ A D FTFPFV+K + G+Q+H QV FG S LI MY CG L A ++F+EM +D WN+L++G+ ++G M AR MPC R VSWT +I+GYAK+G +A+EVF+ M + +EPDE+++++VL ACA LG+LE+G+ I Y + G + ++ NA+I+MYAK G I +AL +F+ + E++V+ W+T+I GLA HG G EA+ +F M AGV PN VTF+ +LSAC H G G R F+ MR + + P IEHYGC++DLLGR G+L +A + I MP + ++ IW +LL++ +H +LE+ A+ +L++LEP SGNY+LLAN+Y+ LG+W+ +R +++ +KK G S IEV N V +F+SGD T P + + IL+ + L Sbjct: 15 NWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLW---ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 411.379 bits (1056), Expect = 4.016e-135 Identity = 207/525 (39.43%), Postives = 317/525 (60.38%), Query Frame = 1 Query: 70 KKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQV--CKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGLTLHQTTASDFMEFVEDDAGQGQVYTKVPLSNQFL 1638 KKLH H+VK L + Y+ ++ + G +D A +F +VFS+N +I ++ +I + EM R+ T V+ +C+ + + L ++VH V CK P +NAL++ Y CG++ A ++F M RD +SW S++ G+ G +K AR F++MP R +SWT MI+GY +AGCF ++LE+FREMQ G+ PDE +++SVL ACA LG+LE+G+WI Y +K+ V NALI+MY KCGC +A +F M ++D W+ M+ GLAN+G+G EAI+VF MQ+ + P+ +T++GVLSAC H+G+ + ++F MR DH +EP + HYGC+VD+LGR G + +A + + KMPM P+S +W LL + R+H + +A +A +++LELEP+ Y LL NIYA +W+ + VR+ I IKKTPG SLIEVN EFV+GD + S+++++ LE L T A+ + E G Y+ ++N+F+ Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT---SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR--LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGDAYS---VANRFV 671 HSP 2 Score: 150.214 bits (378), Expect = 2.676e-37 Identity = 104/384 (27.08%), Postives = 175/384 (45.57%), Query Frame = 1 Query: 22 NRFVATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDL-CDNLG-HVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVI---KSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGK------------------------GY-------EAIRVFEDMQNAGVAPNGVTFVGVLSACVHAG 1065 +RF++ L C + K+LHS + ++ + K+ C LG HV YA +F + +P+V +N +I+ + + ++ ML+ G D TFPF++ K G L G+++H V KFG S+ NAL+ MY+ CG + A VF+ + D SWN +ISG+ RMK E ++E+ EM+ + P ++++ VL AC+++ ++ K +H+Y + + NAL+ YA CG ++ A+ +F M +DVI W++++ G G GY E++ +F +MQ+AG+ P+ T V VL+AC H G Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT---PDSHTFPFLLNGLKRDGGALA--CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY---NRMKEYEE----------------------------SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382 HSP 3 Score: 96.6709 bits (239), Expect = 9.519e-20 Identity = 74/265 (27.92%), Postives = 122/265 (46.04%), Query Frame = 1 Query: 523 VSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLG-ALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHA---GLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQL 1305 V W S + GH + A + F ++P +V W MI G++K C + + ++ M G+ PD + +L + G AL GK +H + K G V NAL++MY+ CG ++ A G+FD+ ++DV W+ MI G + E+I + +M+ V+P VT + VLSAC L K Y + EP + LV+ G + A+ M + D W +++ NL++A +Q+ Sbjct: 74 VFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQM 328
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 1.929e-130 Identity = 191/498 (38.35%), Postives = 317/498 (63.65%), Query Frame = 1 Query: 31 VATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLC---------DNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTK 1497 +A L++CS ++LK +H +++ L ++A+++L LC NL + YA IF + +PN+F +N +IR + + S A + +ML+ D TFPF+IK+ + + C +G+Q H+Q+ +FG ++ +N+L+ MY CG ++ A ++F +M RD VSW S+++G+ + G +++ARE F+EMP R + +W+ MINGYAK CF A+++F M+ G+ +E ++SV+ +CA LGALE G+ ++Y KS + AL++M+ +CG I +A+ +F+ + E D + WS++I GLA HG ++A+ F M + G P VTF VLSAC H GL ++GL ++ M+ DH +EP +EHYGC+VD+LGR G+L +A + I+KM ++P++ I LL +C+I++N E+A L++++PE SG YVLL+NIYA G+W+ + ++R +++ K +KK PG SLIE++ + +F GDD K Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL--LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK---SRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 2.355e-128 Identity = 197/504 (39.09%), Postives = 302/504 (59.92%), Query Frame = 1 Query: 28 FVATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGLT 1539 ++ LR+C IA + +H+ I++ Q ++ +++ +C L VDYA +F + +PNV+ Y A+I + + + +S++ M+ + S L D + V+K+C +CR ++HAQV K G S ++++Y K G+L A ++F+EM +RD V+ +I+ ++ G +K A E F ++ + V WT MI+G + ALE+FREMQ+ + +E + + VL AC+ LGALE+G+W+H + E V NALI MY++CG INEA +F M +KDVI ++TMI GLA HG EAI F DM N G PN VT V +L+AC H GL GL F+ M+ ++EP+IEHYGC+VDLLGR GRL +A I +P++PD + TLLS+C+IH N+E+ ++L E E +SG YVLL+N+YA GKW+ + +R+ +R I+K PG S IEV+N + EF+ GD P + ++ L+ L Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHN---SVLPDNYVITSVLKACDLKVCR----EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 2.852e-127 Identity = 199/495 (40.20%), Postives = 299/495 (60.40%), Query Frame = 1 Query: 31 VATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVD---YATLIFQSLDDPNVFSYNAIIR--TCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKP 1500 ++ L+ CSK ELK++H+ ++K L Q +Y TK L C + D YA ++F D P+ F +N +IR +C+ + SL + ++ ML SA + +TFP ++K+C+ + Q+HAQ+ K G ++ N+LI+ Y G+ A+ +F+ + E D VSWNS+I G+ + G+M A F +M + +SWTTMI+GY +A +AL++F EMQ +EPD +S+ + L ACAQLGALE GKWIH Y K+ + + LI+MYAKCG + EAL +F + +K V W+ +I G A HG G EAI F +MQ G+ PN +TF VL+AC + GL +EG F M D++L+P IEHYGC+VDLLGR G L +A I +MP++P++ IW LL +CRIH+N+E+ E L+ ++P G YV ANI+A KW+ + R+L++ + + K PG S I + EF++GD + P Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLL--YQRML---CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHP 507
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 7.501e-127 Identity = 200/526 (38.02%), Postives = 308/526 (58.56%), Query Frame = 1 Query: 31 VATLRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLC-----DNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCG-------------------------------DLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKD-VICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTK 1497 ++ L +C + L ++H +K + +Y K++ C D L YA + +P+ F +N ++R + + + +++VF EM+R G D F+F FVIK+ R G Q+H Q K G +SH LI MY CG D++GA ++F++M R+ SWN +++G+ + G ++SA+ F+EMP R VSW+TMI G A G F ++ FRE+Q G+ P+E+S+ VL AC+Q G+ E GK +H + EK+G+ +V NALI+MY++CG + A +F+ M EK ++ W++MI GLA HG+G EA+R+F +M GV P+G++F+ +L AC HAGL +EG YF M+ +H+EPEIEHYGC+VDL GR G+L +A D I +MP+ P + +W TLL +C H N+E+A ++L EL+P SG+ VLL+N YA GKW+ V+++RK + +RIKKT SL+EV + +F +G+ K Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDAL---PYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGF--VFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKK 529
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 3.930e-126 Identity = 203/512 (39.65%), Postives = 312/512 (60.94%), Query Frame = 1 Query: 40 LRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLC--DNLGH--VDYATLIFQSLDDPNVFSYNAIIRTCTHNH--KHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEE---------MTER-----DAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDV 1515 + C I +L ++H+ +K + A ++L C +L H +DYA IF + N FS+N IIR + + K +AI++F EM+ + ++FTFP V+K+CA + G+Q+H K+G + L+ MY CG + A +F + MT+R + V WN +I G+ RLG K+AR F++M R++VSW TMI+GY+ G F DA+EVFREM+ I P+ ++++SVLPA ++LG+LE+G+W+H Y+E SG + +ALI+MY+KCG I +A+ +F+++ ++VI WS MI G A HG+ +AI F M+ AGV P+ V ++ +L+AC H GL +EG RYF M LEP IEHYGC+VDLLGR G L +A + I+ MP++PD IW LL +CR+ N+E+ L+++ P +SG YV L+N+YA G W VS +R ++ K I+K PG SLI+++ ++ EFV DD+ P ++++ Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMM--SDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 3.263e-121 Identity = 192/536 (35.82%), Postives = 299/536 (55.78%), Query Frame = 1 Query: 40 LRTCSKIAELKKLHSHIVKLSLSQSNYLATKMLDLCDNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPC-------------------------------------RTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGL 1536 L T I L+ +HS I+ L ++ L K++ +L V A +F + + NV N +IR+ +N + + VF M + D +TFP V+K+C+ +G+++H K G S N L+ MY KCG LS A V +EM+ RD VSWNSL+ G+A+ R A E EM +++VSW MI Y K ++A+E++ M+ G EPD +S+ SVLPAC AL +GK IH Y E+ + + NALI+MYAKCGC+ +A +F+ M +DV+ W+ MI G+G +A+ +F +Q++G+ P+ + FV L+AC HAGL +EG F +M + + P +EH C+VDLLGR G++ +A I M M+P+ ++W LL +CR+H + +I ++A ++L +L PE+SG YVLL+NIYA+ G+WE V+N+R +++SK +KK PG+S +EVN ++ F+ GD + P S +++ L+ L Sbjct: 49 LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR---PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
BLAST of Vigun09g197800.1 vs. DB:Swiss
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 5.752e-121 Identity = 198/522 (37.93%), Postives = 314/522 (60.15%), Query Frame = 1 Query: 49 CSKIAELKKLHSHIVKLSLSQSNYLATKMLDLC-DNLGHVDYATLIFQSLDDPNVFSYNAIIRTCTHNHKHSLAISVFREMLRHGTKSALADKFTFPFVIKSCAGILCRRLGQQVHAQVCKFGPKSHSITDNALIDMYTKCGDLSGAYQVFEEMTERDAVSWNSLISGHARLGRMKSAREAFNEMPCRTIVSWTTMINGYAKAGCFIDALEVFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYAKCGCINEALGLFDQMVEKDVICWSTMIGGLANHGKGYEAIRVFEDMQNAGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRWGRLHQALDTIMKMPMQPDSKIWNTLLSSCRIHRNLEIAVVAMEQLLELEPEESGNYVLLANIYAELGKWESVSNVRKLIRSKRIKKTPGSSLIEVNNMVQEFVSGDDTKPFSQDVFLILEGLTLH-QTTASDFMEFVEDDAGQGQVY 1608 CS + ELK++H+ ++K L A+++L C + ++YA L+F ++ N F +N IIR + + +AIS+F +ML + S + T+P V K+ + R G+Q+H V K G + S N ++ MY CG L A+++F M D V+WNS+I G A+ G + A+ F+EMP R VSW +MI+G+ + G F DAL++FREMQ ++PD +++S+L ACA LGA E G+WIH+Y ++ F + V ALI+MY KCGCI E L +F+ +K + CW++MI GLAN+G A+ +F +++ +G+ P+ V+F+GVL+AC H+G +F +M+ + +EP I+HY +V++LG G L +A I MP++ D+ IW++LLS+CR N+E+A A + L +L+P+E+ YVLL+N YA G +E R L++ ++++K G S IEV+ V EF+S T P S +++ +L+ L T S F E + G Y Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDML-CSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAELFDATTRIGFTY 555 The following BLAST results are available for this feature:
BLAST of Vigun09g197800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g197800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g197800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g197800.1; organism=Vigna unguiculata; type=mRNA; length=1747bpback to top protein sequence of Vigun09g197800.1_Vu_IT97K-499-35_v1.1 >Vigun09g197800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g197800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g197800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=547bpback to top mRNA from alignment at Vu09:37277826..37279572+ Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g197800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g197800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g197800.1; organism=Vigna unguiculata; type=mRNA; length=1747bp; location=Sequence derived from: Vu09:37277826..37279572+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:37277826..37279572+ >Vigun09g197800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g197800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g197800.1; organism=Vigna unguiculata; type=CDS; length=1641bp; location=Sequence derived from: Vu09:37277826..37279572+ (Vigna unguiculataback to top |