Vigun09g201400.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana OX=3702 GN=CSN5B PE=1 SV=1) HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0 Identity = 296/369 (80.22%), Postives = 323/369 (87.53%), Query Frame = 1 Query: 16 MEGLSSSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLI-APTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQA-NRSHTEPSGPEPMI 1116
MEG SSS IA+KTWELEN+I+ +D+P + S + IFYYD+ Q FQ++KPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTD D IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLENVVGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTRTVSAGKVEIGAFRTY +GYKPPDEP+SEYQTIPLNKIEDFGVHCKQYY+LD+TYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+ L SRFG ++ + +KKE+ES L KITRDSAKITVEQVHGLMSQVIKD LFNS+ Q+ N+S T+ S P+PMI
Sbjct: 1 MEG--SSSTIARKTWELENSILTVDSPDSTSDN-----------IFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLHKKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana OX=3702 GN=CSN5A PE=1 SV=2) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 298/371 (80.32%), Postives = 328/371 (88.41%), Query Frame = 1 Query: 16 MEGLSSSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPT--PRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRSHTEPSGPEPMIES 1122
MEG SSSAIA+KTWELENNI+P++ +A DSIF+YD+A Q + Q++KPWA+DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+ D IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG+K D+ +SEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QLA+SR+G IAP R+KE+E LAKITRDSAKITVEQVHGLMSQVIKDILFNS Q+ +S + S PEPMI S
Sbjct: 1 MEG--SSSAIARKTWELENNILPVEP-----------TDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGG-IAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=csn5 PE=1 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 4.797e-159 Identity = 224/341 (65.69%), Postives = 271/341 (79.47%), Query Frame = 1 Query: 37 SAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFN 1059
+A A KT+ELENNI +D D +F YD +F + KPW+ DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y + KQ GRLEN +GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVSAGKVEIGAFRTYP+GYKPP+E SEYQ+IPL+KIEDFGVHCKQYY+L+ITYFKSSLD LLD LWNKYWVNTLSSSP+ N DY+ GQI+DL+EKLEQAE QL+HSR L KK+EES L+K+++DS+K+T+EQV G+MSQV K+ +FN
Sbjct: 6 AADALKTFELENNIQTID----------------HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQLLDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL-----DKKKEESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFN 325
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis OX=8364 GN=cops5 PE=2 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 3.949e-155 Identity = 233/348 (66.95%), Postives = 267/348 (76.72%), Query Frame = 1 Query: 31 SSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQA 1074
+ S++AQKTWEL NN+ + + D I+ YD+ Q E KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK D + +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYYAL++TYFKSSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL F + RK E++ LAK TRDS K T+E +HGLMSQVIKD LFN ++ A
Sbjct: 4 AGSSVAQKTWELSNNMQEVQS---------------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDK--LAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINTA 334
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus OX=10090 GN=Cops5 PE=1 SV=3) HSP 1 Score: 441.425 bits (1134), Expect = 1.728e-154 Identity = 234/349 (67.05%), Postives = 266/349 (76.22%), Query Frame = 1 Query: 28 SSSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQA 1074
+S S +AQKTWEL NN+ + D I+ YD+ Q E KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK D + +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL F + RK E++ LAK TRDS K T+E +HGLMSQVIKD LFN ++ A
Sbjct: 3 ASGSGMAQKTWELANNM---------------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDK--LAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVA 334
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens OX=9606 GN=COPS5 PE=1 SV=4) HSP 1 Score: 440.654 bits (1132), Expect = 3.516e-154 Identity = 233/347 (67.15%), Postives = 265/347 (76.37%), Query Frame = 1 Query: 28 SSSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVH 1068
+S S +AQKTWEL NN+ + D I+ YD+ Q E KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK D + +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL F + RK E++ LAK TRDS K T+E +HGLMSQVIKD LFN ++
Sbjct: 3 ASGSGMAQKTWELANNM---------------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDK--LAKATRDSCKTTIEAIHGLMSQVIKDKLFNQIN 332
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis OX=8355 GN=cops5 PE=2 SV=1) HSP 1 Score: 439.499 bits (1129), Expect = 8.763e-154 Identity = 231/346 (66.76%), Postives = 266/346 (76.88%), Query Frame = 1 Query: 31 SSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVH 1068
+ S++AQKTWEL NN+ + + D I+ YD+ Q E KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK D + +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYYAL++TYFKSSLD LL+LLWNKYWVNTLSSS LL N +Y GQ+ DL+EKLEQ+E QL F + RK E++ LAK TRDS K T+E +HGLMSQVIKD LFN ++
Sbjct: 2 AGSSVAQKTWELSNNMQEVQS---------------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNAEYTTGQVFDLSEKLEQSEAQLGRGSFMLGLESHDRKSEDK--LAKATRDSCKTTIEAIHGLMSQVIKDKLFNQIN 330
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio OX=7955 GN=cops5 PE=2 SV=1) HSP 1 Score: 437.958 bits (1125), Expect = 3.770e-153 Identity = 230/348 (66.09%), Postives = 265/348 (76.15%), Query Frame = 1 Query: 31 SSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQA 1074
+ S+IA KTWEL N++ + + D I+ YD+ Q E KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK D + +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLEN +GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYYAL+++YFKSSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQAE QL F ++ ++ E LAK TRDS K T+E +HGLMSQVIKD LFN V+ +
Sbjct: 2 AGSSIAMKTWELSNSMQEVQS---------------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF--MLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTS 332
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster OX=7227 GN=CSN5 PE=1 SV=1) HSP 1 Score: 434.876 bits (1117), Expect = 5.050e-152 Identity = 220/343 (64.14%), Postives = 256/343 (74.64%), Query Frame = 1 Query: 37 SAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 1065
S AQKTWELENNI + + D IF YD Q + KPW DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM Y + K+ GR+E+ VGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP RTVSAGKV +GAFRTYP+GYKPP+E SEYQTIPLNKIEDFGVHCKQYY L+I+YFKS+LD LLD LWNKYWVNTL SS LL N +Y GQI DL+EKLEQ+EN L +K E L+K TRD ++ T+E +HGLM+Q++KD LFN V
Sbjct: 3 SDAAQKTWELENNIQTLPS---------------CDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGR-------GTDVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323
BLAST of Vigun09g201400.1 vs. DB:Swiss
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans OX=6239 GN=csn-5 PE=1 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 4.936e-130 Identity = 189/367 (51.50%), Postives = 249/367 (67.85%), Query Frame = 1 Query: 13 EMEGLSSSSAIAQKTWELENNIIPMDTPGXXXXXXXXXXXXXXXXIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKXXXXXXXXXXXWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRSHTEPSGPEPM 1113
E++ + SS++ Q+ WE ENN+ +D+ IF Y+ Q E + KPW DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ DA++ I++D FALPVEGTETRVNAQA AYEYM YS+ GR E VVGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP RT+SAGKV+IGAFRTYPEGY+PPD+ SEYQ+IPL KIEDFGVHCK+YY+LD+++FKS LD+H+L LWN YW++TLSSSPL N +++ QI D+ +KL + +L + R + L K+ D+ + E G +S ++K +LF + S PM
Sbjct: 2 EVDNVKPSSSVPQRNWEKENNVQNVDS------------------IFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWISTLSSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLND---------RSVDGHEALMKVVTDAKAVGDELETGRISHLVKQLLFARQAGGGCGCSHASAGSPM 341 The following BLAST results are available for this feature:
BLAST of Vigun09g201400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g201400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g201400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g201400.1; organism=Vigna unguiculata; type=mRNA; length=1597bpback to top protein sequence of Vigun09g201400.1_Vu_IT97K-499-35_v1.1 >Vigun09g201400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g201400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g201400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=375bpback to top mRNA from alignment at Vu09:37564594..37572899- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g201400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g201400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g201400.1; organism=Vigna unguiculata; type=mRNA; length=8306bp; location=Sequence derived from: Vu09:37564594..37572899- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:37564594..37572899- >Vigun09g201400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g201400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g201400.1; organism=Vigna unguiculata; type=CDS; length=1125bp; location=Sequence derived from: Vu09:37564594..37572899- (Vigna unguiculataback to top |