Vigun09g207200.3
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens OX=9606 GN=LYPLA2 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.214e-32 Identity = 76/224 (33.93%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 94 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFP-NLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ +S DAP D G+ +A ++ L+ E P ++ +GGFS G A +LY+A T P L+ +V+LS WLP R Q+ +G A L + CHG+ D +V G +A L S P + F++Y G+ H + P+E V +L L Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTAL-----------TCPHPLAGIVALSCWLPLHRAFP----QAANG--SAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.145e-31 Identity = 75/224 (33.48%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 94 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFP-NLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ +S DAP D G+ +A ++ L+ E P ++ +GGFS G A +LY+A T P L+ +V+LS WLP R Q+ +G A L + CHG+ D +V G +A L + P + F++Y G+ H + P+E V +L L Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTAL-----------TCPHPLAGIVALSCWLPLHRNFP----QAANG--SAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus OX=10090 GN=Lypla2 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.194e-31 Identity = 75/224 (33.48%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 94 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFP-NLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ +S DAP D G+ +A ++ L+ E P ++ +GGFS G A +LY+A T P L+ +V+LS WLP R Q+ +G A L + CHG+ D +V G +A L + P + F++Y G+ H + P+E V +L L Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTAL-----------TCPHPLAGIVALSCWLPLHRNFP----QAANG--SAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: APT11_DICDI (Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282005 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.138e-30 Identity = 72/236 (30.51%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 70 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPN---IKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP-----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLP-CSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFPNLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 +++ + H AT+++ HGLGD+G+ W +++E + N I++ICP AP + V + GGF +W+D+ +S D +D S + ++ E P ++ IGGFS GAA +LY+ Y T L ++LSG+LP ++ + N + + + PL + HG D VV ++ G+ S L S G N F + GLGH++ PEE D + ++++ L Sbjct: 9 SYIQKEITTHSATVIFSHGLGDSGAGWIEVMEEIQSRNNGHIRFICPNAPIQAVTLNGGFKMPSWYDIKSLSSRGDEDPAQVDESKNIIETIIKHEMEEEKIPAERIIIGGFSQGAALSLYT-------FYSQTET---KLGGCIALSGYLPLATKFVANSLNKEQ---------PLLMIHGDCDQVVRHQWGKLSFDHLKSQGI-NGEFITLKGLGHHSSPEEIDLMTKFISKTL 224
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: APTH1_CRYNJ (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CNF02430 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.778e-29 Identity = 74/245 (30.20%), Postives = 116/245 (47.35%), Query Frame = 1 Query: 79 VRPKGKHQATIVWLHGLGDNGSSWSQLLESL--PLPNIKWICPTAPTRPVAIFGGFPCTAWFDV---GEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMAL------------SSAGFPNLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + PK H AT+++LHGLGD+G W + + L PN+KWI P APT PV++ G +WFD+ ++ D +G+ + V L+ E P ++ +GGFS G A ++ N T L+ VV+LS W+P + + + + A +P+F HG D VV Y G+RS L ++ P + F SY G+ H + P+E +++ WL L Sbjct: 10 ISPKEAHTATVIFLHGLGDSGHGWLPVAKMLWSSFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVL-----------NMLTTKRKLAGVVALSTWVPLNHKIVQMMSE------HAKDIPVFWGHGTNDPVVDYRFGQRSVDFLVQKCGYKLLSQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSWLMEAL 237
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: APTH1_CRYNB (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CNBF2260 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.778e-29 Identity = 74/245 (30.20%), Postives = 116/245 (47.35%), Query Frame = 1 Query: 79 VRPKGKHQATIVWLHGLGDNGSSWSQLLESL--PLPNIKWICPTAPTRPVAIFGGFPCTAWFDV---GEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMAL------------SSAGFPNLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + PK H AT+++LHGLGD+G W + + L PN+KWI P APT PV++ G +WFD+ ++ D +G+ + V L+ E P ++ +GGFS G A ++ N T L+ VV+LS W+P + + + + A +P+F HG D VV Y G+RS L ++ P + F SY G+ H + P+E +++ WL L Sbjct: 10 ISPKEAHTATVIFLHGLGDSGHGWLPVAKMLWSSFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVL-----------NMLTTKRKLAGVVALSTWVPLNHKIVQMMSE------HAKDIPVFWGHGTNDPVVDYRFGQRSVDFLVQKCGYKLLSQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSWLMEAL 237
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: APTH1_YARLI (Acyl-protein thioesterase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=YALI0A18337g PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.543e-28 Identity = 70/231 (30.30%), Postives = 115/231 (49.78%), Query Frame = 1 Query: 88 KGKHQATIVWLHGLGDNGSSWSQLLE----SLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISE-DAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSA-MALSSAGFPNLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 K H AT+++LHGLGD+G+ W L E + L ++K+I P AP +PV++ G +W+D+ E++ +A D EG+ S + +L+ E P ++ IGGFS G A +L + G L +V LSG++P + +Q + P+FL HG D V+ +++G+ S ++ F N+ + Y GL H EE ++ WL N+ Sbjct: 12 KAAHTATVIFLHGLGDSGAGWMFLAEEARKAQRLNHVKFIFPEAPQQPVSLNFGMRMPSWYDIKELANVNAAQDQEGILESVGRLESLIKEETDAGVPANRIVIGGFSQGCAVSLAT-----------GCLTQTKLGGIVGLSGYVPIKDYILSQHNTTNQ------DTPMFLAHGTADQVIRFDYGKLSRDFIINELKFKNVDWHQYEGLTHSCGFEEISDILNWLEENI 225
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: APTH1_CANGA (Acyl-protein thioesterase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CAGL0D02398g PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.366e-28 Identity = 77/238 (32.35%), Postives = 115/238 (48.32%), Query Frame = 1 Query: 76 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP-----LPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEIS-EDAPIDLEGLDASAAHVANLLST------EPPNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAG-FPNLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 + K + +++LHGLGD G WS L + L + +I P AP +PV GG P +WFD+ + +D G S V + + EP NI +GGFS GAA AL SA T + A + LSG+ L+N+++++R + + P+F HG+ DDVV + G ++A SAG N F+SY GLGH P E +++ +L SN+ Sbjct: 7 IASTKKPAKYALIFLHGLGDTGQGWSFLAQYLQQYHPCFESTNFIFPNAPIKPVTANGGMPMPSWFDIKVWDWTTSNVDTVGFQQSLKEVQKYVDSSISDGIEPQNII--VGGFSQGAALALASAV-----------TLNNKIGAFIGLSGF----AYLRNELQETRKNLN--PNTPVFHGHGESDDVVPFPIGVQTAEFFKSAGELENYTFKSYRGLGHSADPAELNDLAEFLKSNV 225
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii OX=9601 GN=LYPLA1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.434e-25 Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 1 Query: 76 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFP-NLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 +V K A +++LHGLGD G W++ + +IK+ICP AP RPV + +WFD+ +S D+ D G+ +A ++ L+ E P+ ++ +GGFS G A +LY+A T L+ V +LS WLP + + G R S + CHG D +V G + L + P N+ F++Y G+ H + +E +V +++ L Sbjct: 13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTAL-----------TTQQKLAGVTALSCWLPLRASFP---QGPIGGANRDIS--ILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 226
BLAST of Vigun09g207200.3 vs. DB:Swiss
Match: LYPA1_BOVIN (Acyl-protein thioesterase 1 OS=Bos taurus OX=9913 GN=LYPLA1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.935e-25 Identity = 69/230 (30.00%), Postives = 112/230 (48.70%), Query Frame = 1 Query: 76 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDAPIDLEGLDASAAHVANLLSTEP----PNIKLGIGGFSMGAATALYSATCHVLGHYRNGNTYPINLSAVVSLSGWLPCSRTLKNQIEQSRDGIRRAASLPLFLCHGKGDDVVAYEHGERSAMALSSAGFP-NLMFRSYNGLGHYTVPEETDEVCRWLTSNL 750 +V K A +++LHGLGD G W++ + +IK+ICP AP PV + +WFD+ +S D+ D G+ +A +V L+ E P+ ++ +GGFS G A +LY+A T L+ V +LS WLP + + G+ R S + CHG D +V G +A L + P N+ FR+Y G+ H + +E ++ +++ L Sbjct: 13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSAHIKYICPHAPVMPVTLNMNMAMPSWFDIIGLSPDSLEDETGIKQAAENVKALIDQEVKNGIPSNRIILGGFSQGGALSLYTAL-----------TTQQKLAGVTALSCWLPLRASFP---QGPIGGVNRDIS--ILQCHGDLDPLVPLMFGSLTAEKLKTLVNPANVTFRTYAGMMHSSCQQEMMDIKQFIDKLL 226 The following BLAST results are available for this feature:
BLAST of Vigun09g207200.3 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g207200.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g207200.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g207200.3; organism=Vigna unguiculata; type=mRNA; length=1328bpback to top protein sequence of Vigun09g207200.3_Vu_IT97K-499-35_v1.1 >Vigun09g207200.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g207200.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g207200.3_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=259bpback to top mRNA from alignment at Vu09:38183173..38188244+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g207200.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g207200.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g207200.3; organism=Vigna unguiculata; type=mRNA; length=5072bp; location=Sequence derived from: Vu09:38183173..38188244+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:38183173..38188244+ >Vigun09g207200.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g207200.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g207200.3; organism=Vigna unguiculata; type=CDS; length=777bp; location=Sequence derived from: Vu09:38183173..38188244+ (Vigna unguiculataback to top |