Transcript Overview
| Name | Vigun09g212200.1 |
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| Unique Name | Vigun09g212200.1_Vu_IT97K-499-35_v1.1 |
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| Type | mRNA |
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| Organism | Vigna unguiculata (cowpea) |
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| Sequence length | 2285 |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun09g212200.1 | Vigun09g212200.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
| Vigun09g212200.1_Vu_IT97K-499-35_v1.1 | Vigun09g212200.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun09g212200.1.v1.1.CDS.9 | Vigun09g212200.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.8 | Vigun09g212200.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.7 | Vigun09g212200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.6 | Vigun09g212200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.5 | Vigun09g212200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.4 | Vigun09g212200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.3 | Vigun09g212200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.2 | Vigun09g212200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun09g212200.1.v1.1.CDS.1 | Vigun09g212200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun09g212200.1.v1.1.three_prime_UTR.1 | Vigun09g212200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun09g212200.1.v1.1.five_prime_UTR.1 | Vigun09g212200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
Homology
The following BLAST results are available for this feature:
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g212200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g212200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g212200.1; organism=Vigna unguiculata; type=mRNA; length=2285bp
CATTAACGAGGTTAATGTCCTGAGCAACTCGCCGGTCTCCCAAACACGAT
ATTTTCTAACGGTTAACTATTCTTCTCTCTCTCCACACACACTCAGAGTA
GTGAAGAACACAAGAACATCATAAGTTCATGTTGGTTCCTCTCACACAAT
GCTAAGTTACAGGTCACTGCATTTTTGTTTTCTGCTCACGGTTTTCTTGT
CCAGTTCCTTTCTGTTGTCGCACCAAGCTTCAGGGCCAGAAAATGAGGGA
AAGGATGTTGTAGGCTTTTCTAGGTTGTATGTATACGATGCCGCACCACC
GTTCGAGAACTCGCCCGTTCCCTTAGCTGCTGAGAGAACACGAAGAAAAG
ACCCTCTTAATAGCTTCAACAAGTACATATATGGATGGAATATCAGTGAC
AACCATTATTGGGCTTCTGTGGCATATACTGCAGTTCCTATGTTCAGTAT
TGCAGCAGTTTGGTTCTTGGGCTTTGGCTTGTGCTTAATGACTATTGGTG
TTTGTTACTTCTGTCGTAAAAGAGAGCCTTATGGTTATTCACCAACATGC
TATGCCCTTTCCCTTATTCTCCTGATATTGTTCACATTTGCAGCAGTGAT
TGGATGTGCAGTTCTCTACATCGGCCAGGGAAGTTTCCATCACAGCATGT
CTTCCACATTGCAGTACGTGGTACATCAAGCTGATTCCACTGTGGATAAG
CTTAGGAACGTGTCAGATTATCTTGCTCAGGCTAAACAGGTTGGAATCGA
TCGAATTTTTCTCCCCACAAATGTTCAAACTGATATTGATGCGGCAGAAA
CAGATATCAATAACTCTGCTGGCACACTTGCTGACAAGACAAAAGAGAAC
TCAGACAACATACAAGATCTCTTAGACTCTGCGAGGTTGGCGCTGATCAT
AATAGCTGCTGTTATGCTAGTCTTGACATTTCTTGGATTTTTATTCTCAA
TTTTTGGAATACAGCTCCTTGTGTATATCTTGGTAATGGCAGGATGGGTT
CTTGTTACTGGTGCCCTTATATTATGTGGTTCGTTCCTTGTTCTCCATAA
TGCAACAGCAGACAGTTGTTTAGCAGTGAATGAATGGATCCAGTATCCAA
TTGCACACACGGCAATGGACGATATTCTGCCATGTGTGGACAATGCTACT
GCACAAGAAACATTTTTACGAAGCAAAGAAGTAACTTCTGAACTAGTGAA
TTTGGTGAACCAGGTTATCACCAACGCCTCCAACATAAACTTCGCTCCCA
ATTTCACCCCACTCTACTATAACCAATCTGGTCCCCTCTTGCCGCTCCTC
TGCAATCCCTTCCATCCCGACATGACTGATAGACAATGTGATACTGGTGA
AGTGACCCTAAGCAATGCAACACAGGTGTACGGCGGTTTCGTGTGCCAGG
TTTCACCATCTGAGATATGCATGACGCAGGGGCGTTTGACCCCCACCTTC
TACAACCAAGTCTCCGCCGGAATAAACGTGGCCAACGCTTTGTATAATGA
TGCCCCCTCTTTGGTTGAGCTACAAGATTGCACCTTTGTTCGGGAAACTC
TAAGCGTTATATCTACGGATCATTGTCCTGGTCTAAGGCGTTACAGTAGA
TGGATCTATGTTGGATTGGTAATGGTCTCTTTTGCTGTCATGTTCTCTTT
GATCTTCTGGATCGTGTATGGAAGAGAGCGTAGACATCGTCTGCATAGAA
AAGAGTTAAAGGACTTGACTCctacacgtgcaccaccaccaggacaagca
ctagcattagcCCAAATCCCTGAAGGAGACAAGTATAATTAACAAACTAG
TTGATAATGATGTTGCTCTTCCATTGGTAGTTGGTGGATGAACATGTTTG
AACTGTGTTTAGCTTTTTCCGGTGTTGGGTGTATAATGTTGTAGCTTCTT
TGTATGACACGCTAGCTTTTTAATCAAATGTCATTATTTTACGTGGCATG
ATGAAGAGGAGGAATCAAACAGCATACGAGGCACAAACAGAAGGATAGAG
CACATTGTTTGTTCTTGTGAGGGCAATCATGACACCAACATGTCATGTCA
CAGCTCTTAGATGTTGGACATGTTTTGTTTGGATGCAGTCACGGGAAAAA
GTTATCTCAATATGGTCCTGAAAATATACAAAAAATAGGGAATAGTGCAC
CCAATTTGACTGAATGTTGAGCTGTCTCTCTTTCATTTTGTGGATAAGTT
AGCAGACTCTTCCATTTGGACCCAAACAGAACCCACTGAAAATAAAACAG
GTTAAGAAAAGAACAAGAACACCTCTGCAAGACAA back to topprotein sequence of Vigun09g212200.1_Vu_IT97K-499-35_v1.1 >Vigun09g212200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g212200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g212200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=548bp
MLSYRSLHFCFLLTVFLSSSFLLSHQASGPENEGKDVVGFSRLYVYDAAP
PFENSPVPLAAERTRRKDPLNSFNKYIYGWNISDNHYWASVAYTAVPMFS
IAAVWFLGFGLCLMTIGVCYFCRKREPYGYSPTCYALSLILLILFTFAAV
IGCAVLYIGQGSFHHSMSSTLQYVVHQADSTVDKLRNVSDYLAQAKQVGI
DRIFLPTNVQTDIDAAETDINNSAGTLADKTKENSDNIQDLLDSARLALI
IIAAVMLVLTFLGFLFSIFGIQLLVYILVMAGWVLVTGALILCGSFLVLH
NATADSCLAVNEWIQYPIAHTAMDDILPCVDNATAQETFLRSKEVTSELV
NLVNQVITNASNINFAPNFTPLYYNQSGPLLPLLCNPFHPDMTDRQCDTG
EVTLSNATQVYGGFVCQVSPSEICMTQGRLTPTFYNQVSAGINVANALYN
DAPSLVELQDCTFVRETLSVISTDHCPGLRRYSRWIYVGLVMVSFAVMFS
LIFWIVYGRERRHRLHRKELKDLTPTRAPPPGQALALAQIPEGDKYN* back to topmRNA from alignment at Vu09:38637703..38642133- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun09g212200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g212200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g212200.1; organism=Vigna unguiculata; type=mRNA; length=4431bp; location=Sequence derived from: Vu09:38637703..38642133- (Vigna unguiculata
CATTAACGAGGTTAATGTCCTGAGCAACTCGCCGGTCTCCCAAACACGAT
ATTTTCTAACGGTTAACTATTCTTCTCTCTCTCCACACACACTCAGAGTA
GTGAAGAACACAAGAACATCATAAGTTCATGTTGGTTCCTCTCACACAAT
GCTAAGTTACAGGTCACTGCATTTTTGTTTTCTGCTCACGGTTTTCTTGT
CCAGTTCCTTTCTGTTGTCGCACCAAGCTTCAGGTATTTCACTCACAACT
CTCTCCCTCTGGCTTTTTATTCACTGTTTAGGAGACCCTAAAATCTTGGA
AGCCAAACAAGCCTCTAATTTAAACAAATGTTCTCACTTTTTTTCACTGG
GTTTAGTGGGGGACACATAAGTCACCACTATGACAATGCAGAACAGTGTT
TCATATGATTGTGGCTACTCTCTCACTCTTGAAGATGTTTCCTCAGAAAG
CAAAGCACATGACCATTTTGTTTTTTACAGGGCCAGAAAATGAGGGAAAG
GATGTTGTAGGCTTTTCTAGGTTGTATGTATACGATGCCGCACCACCGTT
CGAGAACTCGCCCGTTCCCTTAGCTGCTGAGAGAACACGAAGAAAAGACC
CTCTTAATAGCTTCAACAAGTACATATATGGATGGAATATCAGTGACAAC
CATTATTGGGCTGTAAGCACTTCGAACCGTTACTCCTTTGTACTGAGGAC
TGATAATGGTTTTATAGTGTGCCACTGAGGACTGTATTTCGTTAATTGTG
CTGTTCTGTTAGGCTCAGAATCTGTGCTTCTATTGTGGTTCTGGGATTTA
CATCACCTATCTTCAGCTATCATTTTAGTTTATCTGCCCAAACTATGAAA
TATGGAATTGTTGGAAAAGTATGTAACGAAGAGTGGTGGTTGTATTTGAA
TTGAAAGTATCTGTGTAGCAATAAAAAGGAGATGCTTTTGGTGCACACAT
TTGTGTTACCTATTTTATCCTTCGATTGATATAGATGCAACTGCAAGTAT
TATTCCAATATATGTATAGGATAAAACACAAGGACAGGATCTCTGCAGCC
TTTGGTGATGTTTTCTGATCAAAATTTGATTGTTATATCAATGACCTTAG
GAGGAACTCATTGGTAAAAATGACAAAAAGCATAAAAAGTAATGCACTAG
AAGTGATCCATTTATTAATATCTTGAGTAGTATCCGGGTTTGTGTAAAAT
TGGAGCCACTATATATGCTTTATTAAAAATACATTTAAATATTCCTTTGC
AGGTGTTTTTAAGGAAAACCAATATTTATCTCCATGGTGGTCATATATGC
TTTATTTAGTTTTACTGGATGAAGATAATGAATGGTCCTGTAGTGTGCTT
CAAATTTAATTGTTTGAATTTGATTTGGCTGAATTAGATTACAGTTGGGT
AATAATCTGGTGACTTCTGACTGATTTCTGTTGTTATGCTTTTCTTTTCT
TTAATTTTGTCTCTTTCCACTTTCAGCACTTTAATCTTACCAAGCTGTTT
GGTTTGCAATGTTGAATTTAAAAAGGCAAAACCCACTAACTATTTTTTTA
TTGAATGCAGTCTGTGGCATATACTGCAGTTCCTATGTTCAGTATTGCAG
CAGTTTGGTTCTTGGGCTTTGGCTTGTGCTTAATGACTATTGGTGTTTGT
TACTTCTGTCGTAAAAGAGAGCCTTATGGTTATTCACCAACATGCTATGC
CCTTTCCCTTATTCTCCTGATATTGTTCACATTTGCAGCAGTGTGTGTAC
ACATCTCTCTCCTTATGTTTTGCTTGTTTCAGGTTTTGTTGGATCTGTAT
CACAAATTGCACTTTTCTGTGTTAACAGGATTGGATGTGCAGTTCTCTAC
ATCGGCCAGGGAAGTTTCCATCACAGCATGTCTTCCACATTGCAGTACGT
GGTACATCAAGCTGATTCCACTGTGGATAAGCTTAGGAACGTGTCAGATT
ATCTTGCTCAGGCTAAACAGGTTGGAATCGATCGAATTTTTCTCCCCACA
AATGTTCAAACTGATATTGATGCGGCAGAAACAGATATCAATAACTCTGC
TGGCACACTTGCTGACAAGACAAAAGAGAACTCAGACAACATACAAGATC
TCTTAGACTCTGCGTAATGATTGATTCTGATGTTTCCACTACAGATATTT
GTTTTTTTGCTTTAGTTTTTACTCTATAACACCAATGTAACAATGATACA
GGAGGTTGGCGCTGATCATAATAGCTGCTGTTATGCTAGTCTTGACATTT
CTTGGATTTTGTAAGTCTCTTCTGTGCCCCCAATTTAGATGCACAAGTTC
TTACTTGCTATGGAATTCATTTCCTTCTTTTTACTTGTTACTACAGTATT
CTCAATTTTTGGAATACAGCTCCTTGTGTATATGTAAGTAATATATACTG
TGTACCACCCAATGTTACATACCTTTCTTGCGATTCTTTGATAGCAAACA
GAACTCCACTTCACATTATGTTTTCTCATGAAACACTTGGCATAAATAAT
TGCAGCTTGGTAATGGCAGGATGGGTTCTTGTTACTGGTGCCCTTATATT
ATGTGGTTCGTTCCTTGTTCTCCATAAGTAAGTTCCTATTTCCCCTCCCT
AAAATAGTCAAAAAGTATTCAATGATTTCACCATATATCTTATTTATTAA
ATTCTTTTTTGCTGCTTCTTTAGGAAATTCTTATTAGTAAGTTGTATGTA
AGCTTCATATAAAAGCTGCATTGTCTAATTAACGTGTCATAAGTGATTAG
TTTCAGATTGAGAGCACTTTGCACATTTCTCTCTCAATTTTTTCTTTGAA
GTTTATCCTTCTCTCATGATATCAGAGATCCTTTCTTGAGCTTCTTTTAT
CCACCGCTGCTCTCTGGTTCAGTTCTTCTTTTTCTCTTCTTTGATAGTCG
AGAATCTTTGATCGTTGTTCTTGCATATTTTTCTTTTTGAAACTTAAGTT
TTCTTCTCAATCTGAAATTATCACTTATCACAAGTTTGGACCATAGAATG
CAGCTTTTATGCGAAGCTTGCATATGAAATTTGGCATTTAGTGTGGAGCT
AATTCCTTTGTGTTTTGGTAGTGCAACAGCAGACAGTTGTTTAGCAGTGA
ATGAATGGATCCAGTATCCAATTGCACACACGGCAATGGACGATATTCTG
CCATGTGTGGACAATGCTACTGCACAAGAAACATTTTTACGAAGCAAAGA
AGTAACTTCTGAACTAGTGAATTTGGTGAACCAGGTTATCACCAACGCCT
CCAACATAAACTTCGCTCCCAATTTCACCCCACTCTACTATAACCAATCT
GGTCCCCTCTTGCCGCTCCTCTGCAATCCCTTCCATCCCGACATGACTGA
TAGACAATGTGATACTGGTGAAGTGACCCTAAGCAATGCAACACAGGTAC
ATAAATTGAACCACCTTCATATAACATACAAACACTGCCAAAACTAAATA
ACATAGAGAAAGTCCTAAATTAGCAGAAAAAATGTAGAGTTAATGTTAAT
ATTAGTTTATGTGTGATGCAGGTGTACGGCGGTTTCGTGTGCCAGGTTTC
ACCATCTGAGATATGCATGACGCAGGGGCGTTTGACCCCCACCTTCTACA
ACCAAGTCTCCGCCGGAATAAACGTGGCCAACGCTTTGTATAATGATGCC
CCCTCTTTGGTTGAGCTACAAGATTGCACCTTTGTTCGGGAAACTCTAAG
CGTTATATCTACGGATCATTGTCCTGGTCTAAGGCGTTACAGTAGATGGA
TCTATGTTGGATTGGTAATGGTCTCTTTTGCTGTCATGTTCTCTTTGATC
TTCTGGATCGTGTATGGAAGAGAGCGTAGACATCGTCTGCATAGAAAAGA
GTTAAAGGACTTGACTCCTACACGTGCACCACCACCAGGACAAGCACTAG
CATTAGCCCAAATCCCTGAAGGAGACAAGTATAATTAACAAACTAGTTGA
TAATGATGTTGCTCTTCCATTGGTAGTTGGTGGATGAACATGTTTGAACT
GTGTTTAGCTTTTTCCGGTGTTGGGTGTATAATGTTGTAGCTTCTTTGTA
TGACACGCTAGCTTTTTAATCAAATGTCATTATTTTACGTGGCATGATGA
AGAGGAGGAATCAAACAGCATACGAGGCACAAACAGAAGGATAGAGCACA
TTGTTTGTTCTTGTGAGGGCAATCATGACACCAACATGTCATGTCACAGC
TCTTAGATGTTGGACATGTTTTGTTTGGATGCAGTCACGGGAAAAAGTTA
TCTCAATATGGTCCTGAAAATATACAAAAAATAGGGAATAGTGCACCCAA
TTTGACTGAATGTTGAGCTGTCTCTCTTTCATTTTGTGGATAAGTTAGCA
GACTCTTCCATTTGGACCCAAACAGAACCCACTGAAAATAAAACAGGTTA
AGAAAAGAACAAGAACACCTCTGCAAGACAA back to topCoding sequence (CDS) from alignment at Vu09:38637703..38642133- >Vigun09g212200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g212200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g212200.1; organism=Vigna unguiculata; type=CDS; length=1644bp; location=Sequence derived from: Vu09:38637703..38642133- (Vigna unguiculata
ATGCTAAGTTACAGGTCACTGCATTTTTGTTTTCTGCTCACGGTTTTCTT
GTCCAGTTCCTTTCTGTTGTCGCACCAAGCTTCAGGGCCAGAAAATGAGG
GAAAGGATGTTGTAGGCTTTTCTAGGTTGTATGTATACGATGCCGCACCA
CCGTTCGAGAACTCGCCCGTTCCCTTAGCTGCTGAGAGAACACGAAGAAA
AGACCCTCTTAATAGCTTCAACAAGTACATATATGGATGGAATATCAGTG
ACAACCATTATTGGGCTTCTGTGGCATATACTGCAGTTCCTATGTTCAGT
ATTGCAGCAGTTTGGTTCTTGGGCTTTGGCTTGTGCTTAATGACTATTGG
TGTTTGTTACTTCTGTCGTAAAAGAGAGCCTTATGGTTATTCACCAACAT
GCTATGCCCTTTCCCTTATTCTCCTGATATTGTTCACATTTGCAGCAGTG
ATTGGATGTGCAGTTCTCTACATCGGCCAGGGAAGTTTCCATCACAGCAT
GTCTTCCACATTGCAGTACGTGGTACATCAAGCTGATTCCACTGTGGATA
AGCTTAGGAACGTGTCAGATTATCTTGCTCAGGCTAAACAGGTTGGAATC
GATCGAATTTTTCTCCCCACAAATGTTCAAACTGATATTGATGCGGCAGA
AACAGATATCAATAACTCTGCTGGCACACTTGCTGACAAGACAAAAGAGA
ACTCAGACAACATACAAGATCTCTTAGACTCTGCGAGGTTGGCGCTGATC
ATAATAGCTGCTGTTATGCTAGTCTTGACATTTCTTGGATTTTTATTCTC
AATTTTTGGAATACAGCTCCTTGTGTATATCTTGGTAATGGCAGGATGGG
TTCTTGTTACTGGTGCCCTTATATTATGTGGTTCGTTCCTTGTTCTCCAT
AATGCAACAGCAGACAGTTGTTTAGCAGTGAATGAATGGATCCAGTATCC
AATTGCACACACGGCAATGGACGATATTCTGCCATGTGTGGACAATGCTA
CTGCACAAGAAACATTTTTACGAAGCAAAGAAGTAACTTCTGAACTAGTG
AATTTGGTGAACCAGGTTATCACCAACGCCTCCAACATAAACTTCGCTCC
CAATTTCACCCCACTCTACTATAACCAATCTGGTCCCCTCTTGCCGCTCC
TCTGCAATCCCTTCCATCCCGACATGACTGATAGACAATGTGATACTGGT
GAAGTGACCCTAAGCAATGCAACACAGGTGTACGGCGGTTTCGTGTGCCA
GGTTTCACCATCTGAGATATGCATGACGCAGGGGCGTTTGACCCCCACCT
TCTACAACCAAGTCTCCGCCGGAATAAACGTGGCCAACGCTTTGTATAAT
GATGCCCCCTCTTTGGTTGAGCTACAAGATTGCACCTTTGTTCGGGAAAC
TCTAAGCGTTATATCTACGGATCATTGTCCTGGTCTAAGGCGTTACAGTA
GATGGATCTATGTTGGATTGGTAATGGTCTCTTTTGCTGTCATGTTCTCT
TTGATCTTCTGGATCGTGTATGGAAGAGAGCGTAGACATCGTCTGCATAG
AAAAGAGTTAAAGGACTTGACTCCTACACGTGCACCACCACCAGGACAAG
CACTAGCATTAGCCCAAATCCCTGAAGGAGACAAGTATAATTAA back to top
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