Vigun09g213800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.317e-67 Identity = 87/167 (52.10%), Postives = 127/167 (76.05%), Query Frame = 1 Query: 37 KPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVQQPTSERVQEGEKRKIRSQS 537
+ PV+LNVYDLTP+N Y YW G+G++HSG++ H +EY +GAHE+ T+G++EV+P++CPGF FR+S+ +GTT + D R++MEKLS++Y G+TYHLI+KNCNHF +VCL+LTGK IP W+NRLAR+G CNC+LP + T V ER++ ++ + S++
Sbjct: 22 EAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAVSA-LPERLEFSDEDESNSEA 187
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_XENLA (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.184e-39 Identity = 67/160 (41.88%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 52 PVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQE 507
P+ LNVYD+ IN Y LG+GV+HSG+QV+G E+ +G H + +G+FE+ P F F+++I +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRWVNRLA L +C+ L +Q S+ +Q+
Sbjct: 5 PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKEWLTPAALQSSISQELQD 164
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_DANRE (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.150e-38 Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 52 PVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHC----PGFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQ 504
PV LNVYD+ IN + LG+GV+HSG++++G E+ +G H + +GIFE+ P F F+++I +G+TD E+DV +E++ +EY GN YHL+ KNCNHF + + L G+ IPRWVNRLA L +C+ L +Q S+ +Q
Sbjct: 5 PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLAYFSSCVPFLQSCLPKEWLTPAALQSSVSQELQ 163
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_CHICK (Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.134e-37 Identity = 64/158 (40.51%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQ 504
V LNVYD+ +N Y LG+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +E+ GN YHL+ KNCNHF + + L GK IPRWVNRLA L +C+ L +Q S+ +Q
Sbjct: 6 VILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ 163
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_MOUSE (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.231e-37 Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQE 507
V LNVYD+ +N Y +G+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRW+NRLA L +C+ L +Q S+ +Q+
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_PONAB (Deubiquitinase DESI2 OS=Pongo abelii OX=9601 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.401e-37 Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQE 507
V LNVYD+ +N Y +G+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRW+NRLA L +C+ L +Q S+ +Q+
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_HUMAN (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.401e-37 Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQE 507
V LNVYD+ +N Y +G+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRW+NRLA L +C+ L +Q S+ +Q+
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQD 165
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_PIG (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.958e-37 Identity = 63/158 (39.87%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQ 504
V LNVYD+ +N Y +G+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRW+NRLA L +C+ L +Q S+ +Q
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ 164
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: DESI2_RAT (Deubiquitinase DESI2 OS=Rattus norvegicus OX=10116 GN=Desi2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.089e-37 Identity = 63/158 (39.87%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 55 VHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCP----GFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLG----LLCNCVLPPGLNDTKVQQPTSERVQ 504
V LNVYD+ +N Y +G+GV+HSG++V+G E+ +G H + +GIFE+ P + F F++++ +G+TD E D+ +E+L +EY GN YHL+ KNCNHF + + L GK IPRW+NRLA L +C+ L +Q S+ +Q
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQ 164
BLAST of Vigun09g213800.1 vs. DB:Swiss
Match: SDU1_SCHPO (DeSI-like protein sdu1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sdu1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.369e-31 Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 55 VHLNVYDL---TPINGYAYWLGLGVYHSGVQVHGVEYGFGAHE-HDTTGIFEVQPKH-CPGFTFRKSIFIGTTDLGEKDVRAFMEKLSQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGL 432
V++NVYDL +P+N A+ LGLG+YH+G+ + G EY FGAHE +TG+F P+ G +R SI + L + DV + +LSQE++G +Y L+ +NCNHF N ++LTG IP ++NR++R+GL
Sbjct: 3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLEGCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIGL 133 The following BLAST results are available for this feature:
BLAST of Vigun09g213800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g213800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g213800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g213800.1; organism=Vigna unguiculata; type=mRNA; length=1354bpback to top protein sequence of Vigun09g213800.1_Vu_IT97K-499-35_v1.1 >Vigun09g213800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g213800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g213800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=224bpback to top mRNA from alignment at Vu09:38791747..38793747- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g213800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g213800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g213800.1; organism=Vigna unguiculata; type=mRNA; length=2001bp; location=Sequence derived from: Vu09:38791747..38793747- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:38791747..38793747- >Vigun09g213800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g213800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g213800.1; organism=Vigna unguiculata; type=CDS; length=672bp; location=Sequence derived from: Vu09:38791747..38793747- (Vigna unguiculataback to top |