Vigun09g249200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.874e-50 Identity = 86/119 (72.27%), Postives = 102/119 (85.71%), Query Frame = 1 Query: 4 AAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAAAAS 360 ++EEGQV G H V W E+ KKG E+KKL+VVDFTASWCGPCRFIAPILA+IAKK+PHV FLKVDVDEL++VS EW VEAMPTF+F+K+GK VD+VVGAKK+ELQQ IVKH+ PA + Sbjct: 8 SSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.407e-50 Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 1 Query: 1 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAA 351 MAAEEGQVIG H+V AW E L+KG ++K LIVVDFTASWCGPCRFIAP LAE+AKKLP+VTFLKVDVDEL++V+ EW VE+MPTF+FLKEGK++DKVVGAKKDELQQ I KH A+ Sbjct: 1 MAAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 9.598e-48 Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 1 Query: 7 AEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAAAA 357 AEEGQVIGVH+V AW EHL+KG + KKLIVVDFTASWCGPC+FIA AE+AKK+P VTFLKVDVDEL+SV+ +W VEAMPTF+FLKEGK+VDKVVGAKKDELQQ I KH + A Sbjct: 2 AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTSTA 118
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 9.475e-44 Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 1 Query: 1 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKH 336 MA+EEGQVI H+V W E L+K ESK L+VVDFTASWCGPCRFIAP A++AKKLP+V FLKVD DEL+SV+ +W ++AMPTF+FLKEGK++DKVVGAKKDELQ I KH Sbjct: 1 MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.802e-40 Identity = 71/121 (58.68%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 1 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAAAASS 363 MAAEEG VI H+ ++ + K +E+ K++++DFTASWCGPCRFIAP+ AE AKK P FLKVDVDEL+ V++++ VEAMPTFLF+K+G DKVVGA+KD+LQ IVKH AA++S Sbjct: 1 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASAS 121
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.802e-40 Identity = 71/121 (58.68%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 1 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAAAASS 363 MAAEEG VI H+ ++ + K +E+ K++++DFTASWCGPCRFIAP+ AE AKK P FLKVDVDEL+ V++++ VEAMPTFLF+K+G DKVVGA+KD+LQ IVKH AA++S Sbjct: 1 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASAS 121
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH5_ARATH (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.253e-38 Identity = 70/117 (59.83%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 7 AEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHSEPAAAA 357 A EG+VI H++ W E +K ESKKLIV+DFTASWC PCRFIAP+ AE+AKK +V F K+DVDEL++V+QE+KVEAMPTF+F+KEG ++D+VVGA KDE+ + ++KH A+A Sbjct: 2 AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.139e-36 Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 1 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKK-LPHVTFLKVDVDELESVSQEWKVEAMPTFLFLXXXXXXXXXXXXXXXXLQQAIVKHS 339 MAAEEGQVIG H+ W L K +ES KLIV+DFTASWC PCR IAPI ++AKK + F KVDVDEL+SV++E+ VEAMPTF+F+K G+VVDK+VGA K++LQ IVKH+ Sbjct: 1 MAAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.035e-35 Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 7 AEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFL 264 AEE QVI H+V W E +K ++S KLIV+DFTASWCGPCR I P ++E+AKK PHV F KVDVD+L+ V++E+KVEAMP+F+ L Sbjct: 2 AEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVIL 87
BLAST of Vigun09g249200.1 vs. DB:Swiss
Match: TRXH3_ARATH (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.440e-35 Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 7 AEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFL 264 A EG+VI H+V W E LK ESKKLIV+DFTA+WC PCRFIAP+ A++AKK V F KVDVDEL +V++E+KV+AMPTF+F+ Sbjct: 2 AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFM 87 The following BLAST results are available for this feature:
BLAST of Vigun09g249200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g249200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g249200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g249200.1; organism=Vigna unguiculata; type=mRNA; length=741bpback to top protein sequence of Vigun09g249200.1_Vu_IT97K-499-35_v1.1 >Vigun09g249200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g249200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g249200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=123bpback to top mRNA from alignment at Vu09:41654239..41655617- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g249200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g249200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g249200.1; organism=Vigna unguiculata; type=mRNA; length=1379bp; location=Sequence derived from: Vu09:41654239..41655617- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:41654239..41655617- >Vigun09g249200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g249200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g249200.1; organism=Vigna unguiculata; type=CDS; length=369bp; location=Sequence derived from: Vu09:41654239..41655617- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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