Vigun09g268500.1

Transcript Overview
NameVigun09g268500.1
Unique NameVigun09g268500.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1156
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:43127309..43132711 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL110Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL378Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL179Pisum sativum Cameor genome v1aPisum sativum
psvuL515Pisum sativum Cameor genome v1aPisum sativum
pvvuL071Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvuL809Pisum sativum Cameor genome v1aPisum sativum
crvuL557Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL192Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL746Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL804Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuL0129Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0632Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL444Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL554Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL650Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL1305Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0125Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0301Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0334Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0372Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0762Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1075Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1142Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL130Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL204Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL553Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL734Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR646Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR659Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR684Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR691Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR703Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR707Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL112Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL104Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL312Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL289Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL580Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL537Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL236Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL160Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL583Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL728Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL412Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL523Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL608Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL072Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL486Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL410Cicer arietinum
carvuL522Cicer arietinum
carvuL618Cicer arietinum
ccavuL181Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL398Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL554Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR720Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR738Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR755Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR767Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR779Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR750Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR772Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR824Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL255Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL481Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL256Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL272Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL497Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL067Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL171Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL711Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR482Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR526Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_02G00100.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_022781075.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058924910.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.2g176200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_05364Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.02G009700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va04G071970.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan04g250500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004500725.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg13366.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_29728.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.009G004500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0014200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr09.1000097Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.2g219720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_019528Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_14968.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.02G010000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_14458.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cr_11717.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_04760Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g268500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g268500Vigun09g268500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g268500.1Vigun09g268500.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g268500.1_Vu_IT97K-499-35_v1.1Vigun09g268500.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g268500.1.v1.1.five_prime_UTR.1Vigun09g268500.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g268500.1.v1.1.CDS.1Vigun09g268500.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g268500.1.v1.1.CDS.2Vigun09g268500.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g268500.1.v1.1.CDS.3Vigun09g268500.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g268500.1.v1.1.CDS.4Vigun09g268500.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g268500.1.v1.1.CDS.5Vigun09g268500.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g268500.1.v1.1.three_prime_UTR.1Vigun09g268500.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 7.721e-118
Identity = 154/213 (72.30%), Postives = 180/213 (84.51%), Query Frame = 1 
Query:    1 MAKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESCSAEGQKKLQNSHSASRLSDTKVDTKR 639
            M K KAPR+ L+SY +KHI+K+I+ GD VLMR S+P KPSYVAR+E IE D RG++ K+ VRWYYRPEESIGGRRQFHG+KEVFLSDHFD QS DTIEGKC VHSF SYTKLD+VGNDDFFCRFEYNS+TGAF+PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  T+EEAK+ D+F+CE CS + Q+ L NS+S S   D KV+ KR
Sbjct:    1 MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQ-QQNLHNSNSTSNNRDAKVNGKR 212
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.669e-109
Identity = 143/209 (68.42%), Postives = 173/209 (82.78%), Query Frame = 1 
Query:    4 AKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESCSAEGQ-KKLQNSHSASRLSDTKV 627
            +K K  R+ L+SY++K  +K +RAGDCVLMRPSD  KP YVAR+E+IEAD R  NVK+H RWYYRPEES+GGRRQFHG+KE+FLSDHFDVQS  TIEGKC VH+FK+YT+L+ VG +D++CRFEY ++TGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW+HPAC+ MT+EEAK+LDHF C  CS++   KK QN  ++S   D KV
Sbjct:   10 SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 2.395e-79
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1 
Query:   73 AGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESCSA--EGQKKLQNSHSASRLSDTK 624
             GDCVLMRPSD  K  YVAR+E+IEAD R  NVK+H RWYY PEES GGRRQ HG+KE+FLSDHFDVQS  TIEGKC VH+FK+YT+L+ VG +D++C F+Y ++TGAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T+EEAK+L+HF C  CS+  +G K+ QN  ++S  +D K
Sbjct:   42 VGDCVLMRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 225
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4)

HSP 1 Score: 60.4622 bits (145), Expect = 2.312e-9
Identity = 40/144 (27.78%), Postives = 67/144 (46.53%), Query Frame = 1 
Query:   13 KAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAV-----GNDDFFCRFEYNSSTGAF-NPDRVAVYC 426
            K   R L   ++    +T+R GDC +   +      Y+ RIE +  +  G+N+ + V+W+Y PEE+  G+RQ  G   ++ S H D     TI  KC V + + Y ++          D ++    Y+ +TG     D V + C
Sbjct: 2497 KGKARKLFYKAIVRGEETLRVGDCAVFLSAGRPNLPYIGRIESM-WESWGSNMVVKVKWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTADGVPILC 2639
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: PHF2_DANRE (Lysine-specific demethylase phf2 OS=Danio rerio OX=7955 GN=phf2 PE=2 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 3.365e-9
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 1 
Query:  412 VAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESC------SAEGQKKLQNSHSASRLSDTK 624
            V VYC C +PY+    M++C+ C DWFH +C+ +  +EA  +D + C +C      S   +KK  N H   +  D +
Sbjct:    4 VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTHGKSTLKKKKSWNKHDTGQSGDVR 80
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: PHF2_MOUSE (Lysine-specific demethylase PHF2 OS=Mus musculus OX=10090 GN=Phf2 PE=1 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 3.890e-9
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 1 
Query:  412 VAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESC 561
            V VYC C +PY+    M++C+ C DWFH +C+ +  EEA  +D + C +C
Sbjct:    4 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: PHF2_HUMAN (Lysine-specific demethylase PHF2 OS=Homo sapiens OX=9606 GN=PHF2 PE=1 SV=4)

HSP 1 Score: 59.6918 bits (143), Expect = 3.890e-9
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 1 
Query:  412 VAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESC------SAEGQKKLQNSHSASRLSDTK 624
            V VYC C +PY+    M++C+ C DWFH +C+ +  EEA  +D + C +C      S   +K+  + H   +  D K
Sbjct:    4 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRTWHKHGPGQAPDVK 80
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=2 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 4.893e-9
Identity = 41/144 (28.47%), Postives = 66/144 (45.83%), Query Frame = 1 
Query:   13 KAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKL-----DAVGNDDFFCRFEYNSSTGAF-NPDRVAVYC 426
            K   R L   ++    +T+R GDC +   +      Y+ RIE +  +  G+N+ + V+W+Y PEE+  G+RQ  G   ++ S H D     TI  KC V   + Y ++          D ++    Y+ +TG     D V V C
Sbjct: 2501 KGKARKLFYKAIVRGKETLRIGDCAVFLSAGRPNLPYIGRIESL-WESWGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTADGVPVLC 2643
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: PHF8_HUMAN (Histone lysine demethylase PHF8 OS=Homo sapiens OX=9606 GN=PHF8 PE=1 SV=3)

HSP 1 Score: 57.7658 bits (138), Expect = 1.463e-8
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 1 
Query:  412 VAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESCSA-EGQKKLQNSHSASRLSDT 621
            V VYC C +PY+    M++C+ C DWFH +C+ +  E+A  +D + C +C    G   ++    +S+  DT
Sbjct:   40 VPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIMKKRRGSSKGHDT 110
[Close]
BLAST of Vigun09g268500.1 vs. DB:Swiss
Match: ORC1A_ARATH (Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1A PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.939e-8
Identity = 31/99 (31.31%), Postives = 53/99 (53.54%), Query Frame = 1 
Query:  121 YVARIERIEADGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVA 417
            + ARIE++  +       I  RWY  PEE++ GR++ +  +E++L++ F     + +   C V   K ++K    G+D F C +EY+   G+F   RVA
Sbjct:  245 WAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRHCFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSFK--RVA 341
The following BLAST results are available for this feature:
BLAST of Vigun09g268500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SHL_ARATH7.721e-11872.30Chromatin remodeling protein SHL OS=Arabidopsis th... [more]
EBS_ARATH1.669e-10968.42Chromatin remodeling protein EBS OS=Arabidopsis th... [more]
EBSL_ARATH2.395e-7961.29Chromatin remodeling protein At4g04260 OS=Arabidop... [more]
BAHC1_HUMAN2.312e-927.78BAH and coiled-coil domain-containing protein 1 OS... [more]
PHF2_DANRE3.365e-933.77Lysine-specific demethylase phf2 OS=Danio rerio OX... [more]
PHF2_MOUSE3.890e-942.00Lysine-specific demethylase PHF2 OS=Mus musculus O... [more]
PHF2_HUMAN3.890e-933.77Lysine-specific demethylase PHF2 OS=Homo sapiens O... [more]
BAHC1_MOUSE4.893e-928.47BAH and coiled-coil domain-containing protein 1 OS... [more]
PHF8_HUMAN1.463e-833.80Histone lysine demethylase PHF8 OS=Homo sapiens OX... [more]
ORC1A_ARATH1.939e-831.31Origin of replication complex subunit 1A OS=Arabid... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 141..188
e-value: 3.1E-8
score: 43.4
IPR001025Bromo adjacent homology (BAH) domainSMARTSM00439BAH_4coord: 21..137
e-value: 2.0E-44
score: 163.6
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 22..136
e-value: 2.3E-22
score: 79.1
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 21..137
score: 24.465
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 141..189
e-value: 2.8E-10
score: 39.9
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 139..190
score: 9.081
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 132..205
e-value: 7.1E-21
score: 75.3
NoneNo IPR availableGENE3D2.30.30.490coord: 1..131
e-value: 2.1E-27
score: 97.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..217
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 142..187
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 130..193

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g268500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g268500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g268500.1; organism=Vigna unguiculata; type=mRNA; length=1156bp
GAACGCTGAGATAAAAGTCGCCCCACCATTACTCCTGTTCAGCGCAGCAC
TGAAAAATAAATAAATTAATGAACCCTTATTACATGTAAAAAGAAAAAAA
AAGACTTAATATTTTTCTGTATTTTTTTTCATCCTCAATCTTCTACACTG
TGTGCTTCCATTCCATCCCATGGCTAAGCCGAAGGCTCCAAGGCGAACCC
TAGAGTCATACTCAGTCAAACACATAAGCAAAACTATCAGAGCTGGTGAT
TGCGTGCTCATGCGACCATCAGATCCGGCAAAACCCTCATATGTGGCCAG
AATCGAGCGGATCGAGGCGGATGGTCGTGGCGCAAATGTGAAAATTCATG
TCCGGTGGTACTATCGGCCGGAGGAGTCAATCGGTGGTCGCCGCCAGTTT
CATGGCTCGAAGGAAGTTTTCCTCTCTGATCACTTTGATGTTCAGAGCAC
CGACACAATCGAAGGCAAGTGTACGGTCCACAGCTTCAAGAGCTACACAA
AACTGGATGCTGTTGGGAACGACGATTTCTTCTGTCGGTTTGAGTACAAT
TCCTCCACCGGTGCCTTCAATCCGGATAGAGTTGCCGTGTATTGTAAATG
TGAGATGCCTTACAATCCTGATGACCTAATGGTCCAATGTGAGGGCTGCA
GTGACTGGTTCCATCCTGCTTGCATAGACATGACTGTTGAAGAAGCCAAA
AGGCTTGACCACTTCTTTTGTGAAAGCTGCTCTGCCGAAGGTCAAAAAAA
GTTGCAGAACTCTCATTCCGCTTCTAGACTCTCAGATACAAAGGTGGACA
CTAAACGCCGTCGTAGGCAATAGTGTGATAGTATATAAAGCATGATAAAA
TGAGTTAGATCTGTAATGAATGTACTGGAGATGTCGCTTTTCTAATCCTG
GGTAGGAGCCAGACAAAGACAGAGACAAAGTTATGTTGTTGTAAGTTGTA
GTCGATCACTTTCACAAAGAGACTAGTTTGGAAACTTATTTGGTTGGAGG
ACTAATGCAGTTTCCTTTGAAGTGGAGGACATGTTTATGTAATTATATAG
TGTAGATTTTGTCTCTTCTCTTCTGGTTCTTGTTCTGAGTCGGACGGACT
GCTGTAAAGTATTTTACTTATTTATGAGAGCAGTAGACACTCAATTCTTT
CTTTCT
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protein sequence of Vigun09g268500.1_Vu_IT97K-499-35_v1.1

>Vigun09g268500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g268500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g268500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=218bp
MAKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDPAKPSYVARIERIEA
DGRGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSTDTIEGK
CTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNP
DDLMVQCEGCSDWFHPACIDMTVEEAKRLDHFFCESCSAEGQKKLQNSHS
ASRLSDTKVDTKRRRRQ*
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mRNA from alignment at Vu09:43127309..43132711+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g268500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g268500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g268500.1; organism=Vigna unguiculata; type=mRNA; length=5403bp; location=Sequence derived from: Vu09:43127309..43132711+ (Vigna unguiculata
GAACGCTGAGATAAAAGTCGCCCCACCATTACTCCTGTTCAGCGCAGCAC
TGAAAAATAAATAAATTAATGAACCCTTATTACATGTAAAAAGAAAAAAA
AAGACTTAATATTTTTCTGTATTTTTTTTCATCCTCAATCTTCTACACTG
TGTGCTTCCATTCCATCCCATGGCTAAGCCGAAGGCTCCAAGGCGAACCC
TAGAGTCATACTCAGTCAAACACATAAGCAAAACTATCAGAGGTAAACTC
ACTCTCTCTTTCTCACAAAACAATTTTGACAAAAAAATTTTGGATTAAAT
CGGACTAATTTTGTTTAGTGCTTGCTCCATTTCTTTTCCTAAATCCACAC
GCGCATGTTGTTGTTGTTGTCTTTCAGCTGGTGATTGCGTGCTCATGCGA
CCATCAGATCCGGCAAAACCCTCATATGTGGCCAGAATCGAGCGGATCGA
GGCGGATGGTCGTGGCGCAAATGTGAAAATTCATGTCCGGTGGTACTATC
GGCCGGAGGAGTCAATCGGTGGTCGCCGCCAGTTTCATGGCTCGAAGGAA
GTTTTCCTCTCTGATCACTTTGATGTTCAGAGCACCGACACAATCGAAGG
CAAGTGTACGGTCCACAGCTTCAAGAGCTACACAAAACTGGATGCTGTTG
GGAACGACGATTTCTTCTGTCGGTTTGAGTACAATTCCTCCACCGGTGCC
TTCAATCCGGATAGAGTTGCCGTGTGAGTCCATAGCTTATTTTTGAGATG
CTGAGATATATTTTCTATTGTAGTCTTTTGCTGCCTAGTTTCAAAATTTG
TTTGATTTTTGGTAGAATTGCTCGTTGGAATGAATGAACTTTCTCTCTTT
ATTTAACTTAAGCTGCCATCAATTCAGAAACTTAATTGAAATGTCTCTTG
GTTAATGACAATTCTAGGTTTCCGTTGGTTAGTCTGGTAATGGTTCAGAT
TACGGGATTATTCTAGAATATATTTACTTGGTTTATTTTATTAGGATTTT
ATTTGTCCAGTTGGAAATGGTAAGTAGCAACTTTTTGTTAGATTCGAGAA
GCTGTGAGATCTTCCTTGGATTCTGCTGACTCTGTGTGATGGAAATTGTT
TAAAATTTCATTGCAGGTATTGTAAATGTGAGATGCCTTACAATCCTGAT
GACCTAATGGTCCAATGTGAGGGCTGCAGTGACTGGTAAGTGGAGTATTT
AAAGTGATTTTATCATTAAATTATTGGCCTTCCCTCTGTTATCCTGATCT
ATGTAAGATGTCTGTTTGGTTTTGCGGACACTGGAATGTTCAGTTCTTTG
AATATCTTGCATCATTCTAATGGAACTTTCAGTTCTATTTGTCCTTTGTC
TTTTTTTTTTTTTTTCCTTTGCTGGTATCATTTGAAGAGAGTATTTTAAG
TCAGCAGTAACTATGGACACATCATTTTGCCTTGTATGTCACTTTTCACT
TGGACTATTCTTCACCCTAAACGGCCAGTGTTATGTATATTGGTTTGGTG
TGCTGTTTTTTTCAACCTGGCTTGTTTTGCTTTTGATTAGGTTGGTAATT
TCTCCCCTACCCTTCTCATTTCTCTCTAAAGGGCACTTATGTATGCGTAT
ACTTATATTCAAAGTTATCAAACTCGCAATTTAACTGGTAAAATTGCTCG
AGTTTATTCTCAAATGCATAATCGGTTTCAGGGAACTCAGTAGGATTGGG
GTAGATCATGAGTTCTTTTTCCTGATTTATGTCTTCATCCACAATGCCAG
TTAAAATTTATACAATTAAGGTTATTCTTGATTAATTTCTCCTTTATGGT
TAGTTTACGAAAACTAACTAAGAATCAAACTGTATACACTAAAAAATTGA
TAAGACATCCAACTAACTATGCTAAACGTCTTCATGAAATGTGTTTATCA
CATACTCAAATGAATTCTGTCAAACTCATGAGTTCAACCCCAAGTTGGGT
GAAATCGTGTGAGCTTAAGTATTAAATGAATTAGTTGTAGTCAATTGTTA
GTTGGTGAAATAGAGTGGCCCTTTGGCGCTGGTAAGGCACTAGTGACCGA
GCACATGGATGTAAAGGTGCCATTTCCATGATTTGCAGGCTTCTGTATGT
GCTGTTAACAGACAAGGCCCTGCAACCTTTGCCATTACAGAGAATGGCAT
TGCATGTTCACTATCATCATCACCGACTGCCACAATGACCTCCCACTCCT
CTACATTCTCTTGTATGTTTGGGGCGGCTCTAGTTAATGGGCAGCTGATG
AGCCAGGTCATACTTAGGGTTTCAATGTTTTAGTTTGAATAACAACTTTT
TCTTTGTTTTATGTAAAACGTAACAAAACATAATAAACTAAATAATATTA
ATAATAGCATTGCAAAATAAAGTGGTAATATAATAAAAGTATAGAATATA
ATAAAAAATATGATATTATTACAAAGTATGAAAAAATATTTAAAGCATAA
TGTTGTATGCACTTATGCCACATTTTTAGTTGGTGTTGATTGAACTTGTT
TACCAGTAATGCAATACTAGATTTAGCTACTTCATTGTGCGATTGAAACA
TCCAATTATTACGATATTTATAGGCATATATGAAGTAAACTTTTATGGAA
TTTATTTAGCTGCCCACACATTGCATATATTCATGGATTGTTGCATGCAT
TTAAGTGTTATGCAACTCTTTTGTGTGTTGGTTATTGACATCAGGGTCGT
AGCTTAAGAGAACTAAGTTTCTTTAAGTATAACTATTTGTAATTGTTCTT
GGCCATAAAAGTAAGTTCGAGATGGAACCTAAAGCAAACAATACTTTAGT
TGGCCATGTTATTCGTCTTTCTTAATTTGGCAAACCTTGCCATCAGCTAC
TGATAAGGTATTTCATTAGTTTCTTATTTCTTTACTTATTATGGTTATCT
ACTATAGTATAGACAATTATCAAAGCTAACTTGTTTCAGGAATTTCATAT
CTTGTCTAAAATATCGTAACAAATTCATCAAAAAAGATCATGCACTTTGA
ATTCATTATTGTACTTTAGTGCTTCCACACTTCATGTATGCATGCAATGA
CACTCAAGTAAATGTGCCAAATTCATAGCAGAAATCTGATGTTCCCTATA
AATAAACTTGATGATTAAACCATATGAAATAAACTCATAAAAACATAAGT
TCTTAATGTGAAAAAAAATTCAAAAGGGGTAATTTCTTCAAATCATTTGA
GTCCTTATAAAACATTGTCATTGTGGGGGTAATGATTAATCAAAACTTTT
TTTAGTACCACACTCGTTGCTCATTTCTTGATTTGAGATTTATGTGAGTT
TGCACAAGTTTTAAGAGTTTACTTAAGTTAATCAGAAAAGAGTTCGATAG
CGAGTTAACTTATTTTTTTCTATTTAGGATCGTACACTCAAGAGTTTGAT
AACCTTGTTCATGGCTATAGCTGCTCACCCATGATATAGTCCTCAAAAGC
CCATTTTTACCTGGGAAGCAGCATGTTCAGGTTTTTTAAGTGTAAAATTG
CAATTTCTCCCCCATTTTCTAATGTGTTTTTTGCTTTAAAAAAATAGGAT
TTGAATTCTTCTTCCTTGCCCTTTGCTGCATTGCATTAGAAAGTTTCCTA
TGTATTGACTTTTTTTTCTTCACATTTCATAAGATTTTTTTTTCCAGTGT
TTCTTTCATCTTTTTCCTTTAAACTTCATTCTGCTAATTTTAATCTAATT
TGTTATGTTCTTTTTATATGAATAGTGAATGTACGATATCCATGTGCATG
GTTATTCCACTGGCAATTCAAACGGTAGGGACGTCCACAAACTAGCTAAG
CAATAGCCTTTAGATTTGACGTGATGATCAACTAATTAGTTCATGGAACA
ACTGAATTAAATTCCTGGAACCCTAGTCTTAAAGGAAGAGAACATAACTT
TTATTCATAGCAAATTTGGTATCCTCGTCATTCTCAGTATAGAACTAACT
AAAGATCTGCTTTGTGAATGTTGAGATGTTTTACAAGTTTTTATCGGAGG
CACAATAAATATGTTAGGTTAACTAGTAAGCCATTTTTAAGAATGGGCTT
TAAGATCTAGGGCCATTAGTTAGTTTTATAAAGCATGATGAATAAAGGAT
TTTTGACCTTCGACACCTCTTTCAATGAGGATTTGTGGATTTGAAAATAA
TTTGTTTTGCAACACGTGCCATTATCTTTTGGATGTCGGGATGTGTGAAT
ATAGTCTTCAGCACGATAATTGATTTTTCAGGTTCCATCCTGCTTGCATA
GACATGACTGTTGAAGAAGCCAAAAGGCTTGACCACTTCTTTTGTGAAAG
CTGCTCTGCCGAAGGTCAAAAAAAGTTGCAGAACTCTCATTCCGCTTCTA
GACTCTCAGATACAAAGGTATTCCAAATATCTGTTGTTTGATAAGTGAGT
TGTTTTCACTTTTCAGAACTTTATACCATTGAATCGACTCACTGAAGCTT
TGGAGAAGTTGATATCTTCTATCATTTATTGGTTTGCTAAATTCTATTCC
TTGTCAAATGATTATATCCTCAATATCCTGTGATTTCATGGTCAGATGCG
TCATCAGTTGGTTCATTTGTATGTAGGAAGTCACCTATTGAGTAAGATAA
TGAGTGCCATTGCGAATTAATATTTCTTTTGTGAAATAACAAAATTTGTT
GTGACTGACATGCATTCGGTATTTCGTATCTTTTTCCAATCCTTTTTTGC
TTAACTTAACGTTTCGTTATGGTTAATGTGGTTTTTGGGACTTCATTAAT
TTAGTATGGCTTGAATGCCTATGGACAGTGCTACCATTTTATTTGTGTAT
ACCTACCATGATATTTCACATAAGAATTATCAGTTTTGACCATCTGAATA
GTGTAGATATCTGAATTCTTCTTCTTAGGCATTGCCATGGAATAACATTA
ATCTGTTATTGTTGAAGTTGGATGGTATTGGTCAGTCAGTATAAGGATTT
ACGTGTGAGAGTAGTTTCCATATAATATTTCTACTGAAAAAAAGGAAGGA
TTGATGTATTAATATCTTTGTGTTGCTTGGTATTGTGCAGGTGGACACTA
AACGCCGTCGTAGGCAATAGTGTGATAGTATATAAAGCATGATAAAATGA
GTTAGATCTGTAATGAATGTACTGGAGATGTCGCTTTTCTAATCCTGGGT
AGGAGCCAGACAAAGACAGAGACAAAGTTATGTTGTTGTAAGTTGTAGTC
GATCACTTTCACAAAGAGACTAGTTTGGAAACTTATTTGGTTGGAGGACT
AATGCAGTTTCCTTTGAAGTGGAGGACATGTTTATGTAATTATATAGTGT
AGATTTTGTCTCTTCTCTTCTGGTTCTTGTTCTGAGTCGGACGGACTGCT
GTAAAGTATTTTACTTATTTATGAGAGCAGTAGACACTCAATTCTTTCTT
TCT
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Coding sequence (CDS) from alignment at Vu09:43127309..43132711+

>Vigun09g268500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g268500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g268500.1; organism=Vigna unguiculata; type=CDS; length=654bp; location=Sequence derived from: Vu09:43127309..43132711+ (Vigna unguiculata
ATGGCTAAGCCGAAGGCTCCAAGGCGAACCCTAGAGTCATACTCAGTCAA
ACACATAAGCAAAACTATCAGAGCTGGTGATTGCGTGCTCATGCGACCAT
CAGATCCGGCAAAACCCTCATATGTGGCCAGAATCGAGCGGATCGAGGCG
GATGGTCGTGGCGCAAATGTGAAAATTCATGTCCGGTGGTACTATCGGCC
GGAGGAGTCAATCGGTGGTCGCCGCCAGTTTCATGGCTCGAAGGAAGTTT
TCCTCTCTGATCACTTTGATGTTCAGAGCACCGACACAATCGAAGGCAAG
TGTACGGTCCACAGCTTCAAGAGCTACACAAAACTGGATGCTGTTGGGAA
CGACGATTTCTTCTGTCGGTTTGAGTACAATTCCTCCACCGGTGCCTTCA
ATCCGGATAGAGTTGCCGTGTATTGTAAATGTGAGATGCCTTACAATCCT
GATGACCTAATGGTCCAATGTGAGGGCTGCAGTGACTGGTTCCATCCTGC
TTGCATAGACATGACTGTTGAAGAAGCCAAAAGGCTTGACCACTTCTTTT
GTGAAAGCTGCTCTGCCGAAGGTCAAAAAAAGTTGCAGAACTCTCATTCC
GCTTCTAGACTCTCAGATACAAAGGTGGACACTAAACGCCGTCGTAGGCA
ATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR001025BAH_dom
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding