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Transcript Overview
Name | Vigun10g122700.1 |
Unique Name | Vigun10g122700.1_Vu_IT97K-499-35_v1.1 |
Type | mRNA |
Organism | Vigna unguiculata (cowpea) |
Sequence length | 6771 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun10g122700.1 | Vigun10g122700.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
Vigun10g122700.1_Vu_IT97K-499-35_v1.1 | Vigun10g122700.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun10g122700.1.v1.1.CDS.3 | Vigun10g122700.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun10g122700.1.v1.1.CDS.2 | Vigun10g122700.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun10g122700.1.v1.1.CDS.1 | Vigun10g122700.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun10g122700.1.v1.1.three_prime_UTR.1 | Vigun10g122700.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun10g122700.1.v1.1.five_prime_UTR.2 | Vigun10g122700.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
Vigun10g122700.1.v1.1.five_prime_UTR.1 | Vigun10g122700.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
Homology
BLAST of Vigun10g122700.1 vs. DB:Swiss
Match: RAP_ARATH (RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAP PE=1 SV=1) HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0 Identity = 382/575 (66.43%), Postives = 462/575 (80.35%), Query Frame = 1
Query: 256 FLGEVDPFGYRAPTKKREKVQRSKLLEETDEMDWCVRARKKALKSIEARGMGHLIEDLVTVXXXXXXXXXXXXXXXXXXXIENI-------EDLDFGLEEEFPQPIQPLNDVDDLKRRVSMFSDGLFIXXXXXXXXXFVNRLSQFSGPSDHRKEVNLNKAIIEAQTADDVLEITYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVTMTRTRRLAFARQKEMSMLVSVAMTALPECSAQGISNISWALSKIGGELLYFSEMDRIAEVALTKVGDFNSQNIANIAGAFAAMQHSAPDLFSELSKRASNIIHTFQEQELAQLLWAFASLYEPVDLVFDSLDIVFKDSCQLRSCTSEKTSSNDEQISFDRTGASNGSLSSPVLTLTRDQLGTIAWSYAVFGQMDRSFFSHVWKTLCDYEEQRVSEFYREDMMFASQVHLVNQCLKLEFPHLQLSLCSEFEEKVALAGKTKRFNQKITSSFQKEVGRLLISTGLEWVKEYVVDGYTLDAVLVDKKLALEIDGPTHFSRNTGVPLGHTMLKRRYITACGWKVASVSHLEWEETQGAFEQVEYLRNIL 1959
FLGE+DP + KKR+K + SK LE+T+ MDWCVRARK ALKSIEARG+ + +++ +KKKKK K K KK K ++I ED D E+ F + + + DL++RVS + G+F EKKEK KE+ RLSQFSGPSD KE+NLNKAIIEAQTA++VLE+T ETI+AVAKGLSPSPLSPLNIATALHRIAKNMEKV+M RTRRLAFARQ+EMSMLV++AMT LPECSAQGISNISWALSKIGGELLY +EMDR+AEVA +KVG+FNSQN+ANIAGAFA+M+HSAP+LF+ELSKRAS II+TF+ QE+AQLLW+FASLYEP D + +SLD FK S Q + +++ +++DE + + S+ SP L+ RDQLG IAWSYAV GQ++R FF+++W TL EEQR+SE YRED+MFASQV+LVNQCLKLE PHLQLSLC E EEK++ AGKTKRFNQKITSSFQKEVGRLLISTGL+W KE+ VDGYT+D LV+KK+ALEIDGPTHFSRN+G+PLGHTMLKRRY+ A GWKV S+S EWEE +G+ EQ+EYLR IL
Sbjct: 102 FLGEIDPLDIQP-PKKRKKQKNSKALEDTEGMDWCVRARKIALKSIEARGLSSRMAEVMPLKKKKKKKSKKVIVKKDKVKSKSIPEDDFDTEDEDLDFEDGFVE-----DKMGDLRKRVSSLAGGMFEEKKEKMKEQLAQRLSQFSGPSDRMKEINLNKAIIEAQTAEEVLEVTAETIMAVAKGLSPSPLSPLNIATALHRIAKNMEKVSMMRTRRLAFARQREMSMLVALAMTCLPECSAQGISNISWALSKIGGELLYLTEMDRVAEVATSKVGEFNSQNVANIAGAFASMRHSAPELFAELSKRASTIINTFKGQEIAQLLWSFASLYEPADPLLESLDSAFKSSDQFKCYLTKEITNSDEVVDAE---VSDDVSRSPALSFNRDQLGNIAWSYAVLGQVERPFFANIWNTLTTLEEQRLSEQYREDVMFASQVYLVNQCLKLECPHLQLSLCQELEEKISRAGKTKRFNQKITSSFQKEVGRLLISTGLDWAKEHDVDGYTVDVALVEKKVALEIDGPTHFSRNSGLPLGHTMLKRRYVAAAGWKVVSLSLQEWEEHEGSHEQLEYLREIL 667
BLAST of Vigun10g122700.1 vs. DB:Swiss
Match: RAP_ORYSJ (RAP domain-containing protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AL1 PE=2 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 285/471 (60.51%), Postives = 363/471 (77.07%), Query Frame = 1
Query: 565 DVDDLKRRVSMFSDGLFIXXXXXXXXXFVNRLSQFS--GPSDHRKEVNLNKAIIEAQTADDVLEITYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVTMTRTRRLAFARQKEMSMLVSVAMTALPECSAQGISNISWALSKIGGELLYFSEMDRIAEVALTKVGDFNSQNIANIAGAFAAMQHSAPDLFSELSKRASNIIHTFQEQELAQLLWAFASLYEPVDLVFDSLDIVFKDS----CQLRSCTSEKTSSNDEQISFDRTGASNGSLSSPVLTLTRDQLGTIAWSYAVFGQMDRSFFSHVWKTLCDYEEQRVSEFYREDMMFASQVHLVNQCLKLEFPHLQLSLCSEFEEKVALAGKTKRFNQKITSSFQKEVGRLLISTGLEWVKEYVVDGYTLDAVLVDKKLALEIDGPTHFSRNTGVPLGHTMLKRRYITACGWKVASVSHLEWEETQGAFEQVEYLRNIL 1959
++DDL+ RV+ F+DG+F EK+++ +E+F+ LS FS PS+ +EV+LN++I+EA+TAD+VL +T E + AVAKGLSPSPL+PLNIATALHRIAKNME V+M +T RL FAR ++MSMLV +AM ALPECS QG+SNISWALSKIGG+LLY EMDRIA+VA+TKV FN+QN+AN+AG+FA+M+HSAPDL S L++RA+ +++TF+EQELAQ LW ASL E + D+LD +D+ C L S+D++ S + S ++ L TRDQ+G IAWSYAV GQMDR FFS +WKTL +EE+++S+ YREDMMF SQV+L NQ LKLE+PHL + L + EE + G++KRFNQK+TSSFQKEVGRLL STG EW KEY +DGYT+DAVLVD+KLA EIDGP+HFSRN G PLGHT KRRYI A GW + S+SH EWE +G FEQ+EYLR IL
Sbjct: 170 ELDDLELRVAQFADGMFDEKRQRNREQFIQTLSAFSPAAPSNRSQEVSLNRSIVEARTADEVLALTAEVVAAVAKGLSPSPLTPLNIATALHRIAKNMEAVSMLQTHRLGFARSRDMSMLVGLAMVALPECSPQGVSNISWALSKIGGDLLYLPEMDRIAQVAITKVDSFNAQNVANVAGSFASMRHSAPDLISALTRRAAELVYTFKEQELAQFLWGCASLNECPYPLLDALDTACRDAPSFDCHLHDTVPGMWQSSDKEAS-----SLKNSSNAYALNFTRDQIGNIAWSYAVLGQMDRPFFSGIWKTLSQFEERKISDQYREDMMFVSQVYLANQSLKLEYPHLDMCLRGDLEENLTKTGRSKRFNQKMTSSFQKEVGRLLCSTGHEWNKEYTIDGYTVDAVLVDEKLAFEIDGPSHFSRNLGTPLGHTAFKRRYIAAAGWNLVSLSHQEWENLEGEFEQLEYLRRIL 635
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR013584 | RAP domain | SMART | SM00952 | RAP_3 | coord: 595..652 e-value: 2.9E-12 score: 56.7 |
IPR013584 | RAP domain | PFAM | PF08373 | RAP | coord: 595..651 e-value: 2.5E-13 score: 49.9 |
IPR013584 | RAP domain | PROSITE | PS51286 | RAP | coord: 593..651 score: 20.296 |
None | No IPR available | GENE3D | 3.40.960.10 | | coord: 551..654 e-value: 2.7E-7 score: 32.3 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 55..78 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun10g122700.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g122700.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g122700.1; organism=Vigna unguiculata; type=mRNA; length=6771bp AACCATACCCGTGAGAAACAACCACTTTAGAGGATAACTTGAACAGCAAA GAAGGAGCCACTCTCTTGCACTCCAGCCGTCAGTTGCAAAAGGAGAAAGA gtgtgtgtgtgtgtgtgagtgagtgagagcgagaCCAACTTGAAATTTCT CCTTCTCTTCGAAGGTGAGGTATGGAAGGGTTATTGAATTCCTTGCTTAA CCAAAGTTGCTTAAAACCCTTTGGTTTCACTCCGAGACTTGGTTATACTT TCCCAGTGGTTACAACTAGAACTGGGAGTTTAAATCGAAAACCTGAATCC TGCACCCTGAGAAGTAATTGCACACAATTGGGTAGAGACACTGGCGCTAG TTCCCGGAGAGCTGGTGTTGATGCACTGGATAATGGTGGTGATGGAGAAG AATCTAATGTGGAGTGGGAATCTGAGTTTCTTGGGGAAGTTGATCCGTTT GGTTACCGGGCTCCCACTAAGAAAAGGGAAAAAGTGCAGAGGTCAAAGTT GCTTGAAGAAACTGATGAAATGGATTGGTGTGTGAGGGCCAGAAAGAAGG CCCTGAAATCAATTGAAGCAAGGGGCATGGGTCATCTGATTGAAGATTTG GTTACGGTTaagaagaaaaagaaggacaagaagaagttggaaagcaagaa gaaaatagtaaagaaAATTGAGAATATCGAAGATCTTGACTTTGGCTTGG AGGAAGAGTTCCCACAGCCTATCCAACCTCTGAATGATGTTGACGATTTG AAAAGGAGAGTGAGTATGTTTTCTGATGGACTGTTTATAGAAAAGAAGGA AAAAGCAAAGGAAGAATTTGTCAATAGGCTTTCTCAATTCTCCGGGCCAT CTGATCATAGAAAAGAAGTCAACTTGAATAAAGCAATCATTGAAGCACAG ACTGCAGATGATGTTTTAGAGATAACATATGAAACAATTGTTGCGGTTGC AAAAGGCCTAAGCCCTTCTCCTCTGTCCCCATTGAACATTGCCACTGCTC TTCATCGCATTGCTAAGAATATGGAGAAGGTTACTATGACGAGAACTCGA AGATTGGCTTTTGCTCGACAAAAAGAGATGTCTATGCTTGTGAGTGTTGC GATGACAGCCTTACCTGAGTGCTCTGCTCAAGGAATCTCTAACATATCTT GGGCACTGTCCAAAATTGGAGGTGAACTGCTTTATTTTTCAGAAATGGAT AGAATTGCAGAGGTTGCACTGACCAAGGTTGGGGATTTCAACTCCCAAAA CATTGCTAATATAGCAGGTGCCTTTGCTGCAATGCAGCATTCTGCTCCTG ATCTTTTCTCAGAGTTGTCGAAAAGGGCTTCAAACATAATTCACACTTTT CAAGAACAAGAGCTAGCTCAACTTTTATGGGCTTTTGCTTCGCTATATGA GCCAGTTGACCTTGTATTTGATTCTTTAGACATAGTCTTCAAAGATAGTT GCCAATTGAGAAGTTGCACAAGTGAAAAGACATCGAGTAATGATGAACAA ATCAGTTTTGACAGAACTGGTGCCTCAAATGGATCTCTGAGCTCTCCTGT ACTCACTTTAACGAGGGACCAGCTTGGGACAATAGCTTGGTCCTATGCGG TCTTTGGACAAATGGATAGGAGTTTCTTCTCTCATGTCTGGAAAACTCTC TGCGATTATGAGGAGCAAAGGGTTTCAGAGTTTTACAGGGAGGATATGAT GTTTGCTTCTCAAGTTCATCTTGTAAACCAGTGCTTGAAGCTTGAATTCC CACATCTTCAGTTGTCATTATGTAGTGAGTTTGAGGAGAAAGTTGCCCTT GCTGGAAAAACTAAAAGGTTTAATCAGAAAATAACTTCATCATTTCAAAA AGAGGTTGGACGCCTACTCATAAGCACTGGCCTGGAATGGGTCAAAGAAT ATGTTGTGGATGGTTACACTTTGGATGCTGTGCTTGTTGATAAGAAGCTT GCTTTGGAGATTGATGGTCCAACTCACTTCTCGAGAAATACTGGTGTTCC ATTAGGACATACCATGTTAAAACGTCGATACATCACTGCTTGTGGTTGGA AAGTCGCATCTGTATCCCATCTGGAGTGGGAGGAAACTCAAGGGGCGTTT GAACAAGTAGAGTACCTTAGGAACATCCTCAAAAATCATCTAGACGAGGG ATACGCCGAAACTACTCTGACTGGGGTAAAGTGATTAGCCAATGCTGCTT GTCAAGTGTAAGGAGATATCAGATATGTATTTTTTACCAAGCTCCCTTGA TAAATTTTAGTAAAGAGGATGTATATTTCTTGGAAATATTTCATTTCAAA AGCATAAATACCATTTCTCCCCATTTTGTTTTGCACTAAAATCACTCTAG TCTATAAGTTCAACACCACAAATGAATTTGGTTCATAATAATACACAAGA TCAAATTTGACAATTGACAATTCTTAATCAATTAGCTATTAAAATTAACA TTGCCTGTCATTTGGACCCTAATATTACCAATTACCAAATTAGTCTATTT CGTGTATTTAGTTCTTTGGCAACAAAGGATAGCTAGACCATTGTGTTCAT TGCAATGTTATACAGATATTAAATATTAGACGAGAATATGTAATCAAGAA GTACCACTGGTAGAATAGAACCCTGCCACGGTTTAGACTCAGATTCGTTT CCTGTCTGTTGCACATTCAAAAGGGCTTTGGTGAAAAATTCTGTCCAATT GGGTGGGTCAATTGTTGGTCATCGCACACAGGTCAATGAAGATAATGTTT CTGAGCTCTCTTATTGTTTTTTTCCTTGAGTTGTCTTTTTTTTATGCATA CAACTCTGACAATATCTCAGGTCACAGTCAAAAGATAATCTATGTTTGTG GAGTGCAATTTCTCCTTACCAAACACTATTTTAACATTGCAGAAATCTGT CATAAGACCATCTTTTATTTTGTCTGGATGTTGCTTTGAGATTTTGCATG ATTAAACATATATTCTAGCAGGCCATTTCTTTACTTGGTAGGGGATATAA TTGTTGTCATAATGACGCAATGGTACCTACCAAATACCACAACACAAGCA TACAATGCTTTCAATTTTGTTATAGCTTGAAGCTTGGGAGGAAAGGACCG GCTTTGAATTAACCCTTTAACAACGTTTACGTTTAAGCCTAAGTAAAATT AGTTCCATAGTTTGGTTGGGTTGAAGAAGAATATAAAAGAAGTGAAAAAT ATTATTTCAGAGTGGCAATTTAATAGATTAAAAATAGGATTTTATTAGTT TTCGGTACCTCCAAAATTAATTTGTTTAGAAATTGGCACCACAAAAATTT ATTTAGTTTTTTTTATACTTAACATTTAATAGATATATAAATTTGATTTT GATAGTAACTTTATGTAATCATCCAAAATAATTATTTGCAAGTATGTTGG TGTTTGGAGTTCAAGATTGCCATGTTAACACCATTTATTCAAAATACCTA GAAAAATTACTCATCTAAGCTGACTTTATTTTGGCAACACCTCCCTACTA ATGGGTTTATTTTAGTCCTTTATCTATTGTAATATATATTAGTCTATCGT TAGACACAGTCAGAGGGCTTGCACAATGACACTGCCTAGCCATGCTCATA AGATGACCTACTCGTATCTCTCAAATCTACACTCCTCTGCATTACCATTG TTGTTTATCTTATTTGCTTCATTTTGTGACTATGAACTTAGATTACAACT AAGGTAAGAACTGGATTTCTCCATTTTTGTATTTGTATTATGTTTTATAT TTTTCTTCAATATTTTATCAAGTTCTCTTGTTTTGTAACAAGTGAATCGG TTTAGTATTGGTCCTTCATATTATTTTTCTTCTTCCATCGACCGTTGGAC AGCCAATCTATCCACCCCTGATGGCAAACCTGCACTCGGTCTCACTTTCT CACGTGCCAATGGTCTCACCCATGCAGGTTCTCTTCCTTCAGCTGTCAAG TTAAAGCTTCTGCCTACTGAAttttttttcattaatggtattttgtttgc ttttttttttttttttGCTGTTCTGTTGGATGCTCTACACATGCACTAGA AGCATCGCAATCTTACCAAGTTCCGAACTTTATTATTGCTTGCTTGTAGT TAGATTCTTTCAATTTCAATAACTCACGTGAATTCATTGAAAACCTGATC ATGAACACCGTTTCATGAAGTGGGCTCATTCAGTTTCGATGCTATGCTAA GAAACTGAATCTGCTGTGTTTTATTCATTGTATTCTGATATTTCAATTCA ATTTTTATGGTGTTTAACAAAATAGGTAATTTGGGAGGTGGTTACATTTG TGAATTTAAATGTAATATTTGATATTGATATGGTTCTGGCCTGGGTCTTG GATAATATAGCCCTTTCTCTGCGCTGATGATGGGTAAAGCTAAAAGGGAA CCAAAGTTTGCTATTGTGAAAGGTTGTCACTTCCAGGAAAATCTATAGGT TAGGTTTTTCTTTCTCTCACCGAATGCTGGTTCCTTCATTGTGCTTGGTT TTGTTCTATTGTCAATTCTTGAAATCCTATCTAATTGAGCTACGAAGAAG AGGTTTTTAACTAAGAAAAGAAAAATCTTATGAAGGAAAAGTTACCCAGA GACACGTCAGGTTCGATTCTCACTCCTAGCCCCCCTTTTAATTGGCCCTG AATCTATTGCTTTCTCCCTTTCTCTGTTGGTTTAAATTTGTATTATTTAG TCCTAGTCATTCTGCGGCAACTTGCTTTTCTTACGGGATTTTGGTGGATA CCAATTTTAGATTAGAGTGAGTGTGCTTTGTTTTGCCTTAATATATACCT TTTTGTTTCTCTCTTTCTAATAAACAAATGATCATTCTGGTTATACATAC GCAATTTTCCATGGAATACACTGTTCAAATTTGCAGTATGTGATATGTTT GCAACTATATGTAGATGGCATGCGCTAATATGCATATGACGCTCATGATC TAACACTAACACTATTACGGGATAAAAATACTAAAGCATTTCAGTTATGG CAGATTTTTTAGTGTCTGTCTGTTTCTCACACAACACAATCTTTTATCAA ATTCTCTTGGATATATCTGTAGGGGGTCAGGTACAAATTTGAATTAATCA GAAAGGGAAAAACATATCTCTTTAAACAAATTTACGAAGGTTGTCTCTTA ATCTAGGGGAGGAAAGAAATTATATTACTATCGTTTTATTTGTCCTTTTT ATGCATAACATGATTGCCAAGGATCCTCAATTTGAGAGAATACTAATGAA GGTACTTATGCTGCAACGGCCTTGTTTAGCAATTTGATTACTGATAAATG GCTCTTCAGGCTGGACGAGAAATAGTCTATTTACTGTTCTGTTTACTTGA ATTACGACCCTGAGGAATGGAAAAACAAATTTTCAATTATTTTTTGTTCA TTTGGGATTTGTTTGAACCTTGTAAATTTCCTATCATTTGGGATTGTGAT ATTTTTAAATCTCAACAGGCACAAGTGCTACATTGTTGCAACATGTGATC GGGACTTGAAGAGTAGAATTGGGAAGGTAACGTCATTTTTTACTTTTCAT GTTTGGTTTGTTTTGATATTTGGATTTCTGTATTGCAGATTCCTGGTGTT CCAAttgttgggaatagtccaagtgtgagtcaaaaagtcccacattggat agaaaagacaaagttaaacactatataagaataaagacccataacaacat tgccttaaggttttggtgtaaaagtggtgtctaaggtcttatatgtgtaa gactaatgtcatataaccatatagaaccataatctcccaataaccatatg ccataaccatgcccataaccgtatatgagaaatatatataacttatcagt ggtatcagagccgatggttcggagtgactgaccgcataaccataaccaaa ggggtcactcatacacacctgaagggaaatataccatatgaaaaaaagaa aaaaacaagggactcacccttgaggggagatgttgggaatagtccaagtg tgagtcaaaaagtcccacattggatagaaaagacaaagttaaacactata taagaataaagacccataacaacattgccttaaggttttggtgtaaaagt ggtgtctaaggtcttatatgtgtaagactaatgtcatataaccatataga accataatctcccaataaccatatgccataaccatgcccataaccgtata tgagaaatatatataacttatcaCCAATAATGTTCATCGCGAAATACAGA TGCTCTGTTGAGAAGCAACAATTGGTGGAGGTAGATACTCTTCTTTAGTG AAATTTATAACACGCTTAACTACTAATTTTTGAACTTAGTTACACAAATT TGCATAGCTTTTTCTTATAAACTAGATTAATTAAGCTTCATTGACGTTTG TTCAACTCCAAAGCTGTTTCGTAAATACACAACATATTTGGCAATTTTGA ACAATGAAACGTTTCACAATGACTTTTGAAATCAACACTTTATTCTGTAG AGCATTGTATTAAGCAAAAGCTGGGTGCTTTACTTTGAGATGTTCAGTTG TTGCTTCATTTTTTCCACGAAAGTTCTATCATGCATCAATTGCAAGAAGA TTTTGTGAAGACACAATGGTATTGACTTTGGTAAGTTCCCTGTTAATTTG GATGTACATGCCGACAAACAAATGTGTCGTAATAACACTTTCAAAAAGAA GGAATATATTCTCTTTTATATTTAATTAAGTTTCAAGATCGTTATAAATT TATATGGTGATCGATATATAT back to topprotein sequence of Vigun10g122700.1_Vu_IT97K-499-35_v1.1 >Vigun10g122700.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g122700.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g122700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=671bp MEGLLNSLLNQSCLKPFGFTPRLGYTFPVVTTRTGSLNRKPESCTLRSNC TQLGRDTGASSRRAGVDALDNGGDGEESNVEWESEFLGEVDPFGYRAPTK KREKVQRSKLLEETDEMDWCVRARKKALKSIEARGMGHLIEDLVTVKKKK KDKKKLESKKKIVKKIENIEDLDFGLEEEFPQPIQPLNDVDDLKRRVSMF SDGLFIEKKEKAKEEFVNRLSQFSGPSDHRKEVNLNKAIIEAQTADDVLE ITYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVTMTRTRRLAFARQ KEMSMLVSVAMTALPECSAQGISNISWALSKIGGELLYFSEMDRIAEVAL TKVGDFNSQNIANIAGAFAAMQHSAPDLFSELSKRASNIIHTFQEQELAQ LLWAFASLYEPVDLVFDSLDIVFKDSCQLRSCTSEKTSSNDEQISFDRTG ASNGSLSSPVLTLTRDQLGTIAWSYAVFGQMDRSFFSHVWKTLCDYEEQR VSEFYREDMMFASQVHLVNQCLKLEFPHLQLSLCSEFEEKVALAGKTKRF NQKITSSFQKEVGRLLISTGLEWVKEYVVDGYTLDAVLVDKKLALEIDGP THFSRNTGVPLGHTMLKRRYITACGWKVASVSHLEWEETQGAFEQVEYLR NILKNHLDEGYAETTLTGVK* back to topmRNA from alignment at Vu10:33027526..33035108- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun10g122700.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g122700.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g122700.1; organism=Vigna unguiculata; type=mRNA; length=7583bp; location=Sequence derived from: Vu10:33027526..33035108- (Vigna unguiculata AACCATACCCGTGAGAAACAACCACTTTAGAGGATAACTTGAACAGCAAA
GAAGGAGCCACTCTCTTGCACTCCAGCCGTCAGTTGCAAAAGGAGAAAGA
GTGTGTGTGTGTGTGTGAGTGAGTGAGAGCGAGACCAACTTGAAATTTCT
CCTTCTCTTCGAAGGTAGGGAATGGGGTATCCCTCTCTTTTTGCTTTTCT
TTTTCTTCCCTTCATCTCAAAATCTGCTCATAGAAATAATTTCTAACCAG
AGGCTGTTTTTTTTTATTGTTTTCCCTGTTTCACTTGGTGTTATTGTCCT
TTGAATAGTTATGGATGATATTTGAATTTTAGTGGTGTTCTTCTTTTTGT
TTAGTTGCATGGTCAAACCTATTTGGTTGAATTTGTTTTCTTCAGGTGAG
GTATGGAAGGGTTATTGAATTCCTTGCTTAACCAAAGTTGCTTAAAACCC
TTTGGTTTCACTCCGAGACTTGGTTATACTTTCCCAGTGGTTACAACTAG
AACTGGGAGTTTAAATCGAAAACCTGAATCCTGCACCCTGAGAAGTAATT
GCACACAATTGGGTAGAGACACTGGCGCTAGTTCCCGGAGAGCTGGTGTT
GATGCACTGGATAATGGTGGTGATGGAGAAGAATCTAATGTGGAGTGGGA
ATCTGAGTTTCTTGGGGAAGTTGATCCGTTTGGTTACCGGGCTCCCACTA
AGAAAAGGGAAAAAGTGCAGAGGTCAAAGTTGCTTGAAGAAACTGATGAA
ATGGATTGGTGTGTGAGGGCCAGAAAGAAGGCCCTGAAATCAATTGAAGC
AAGGGGCATGGGTCATCTGATTGAAGATTTGGTTACGGTTAAGAAGAAAA
AGAAGGACAAGAAGAAGTTGGAAAGCAAGAAGAAAATAGTAAAGAAAATT
GAGAATATCGAAGATCTTGACTTTGGCTTGGAGGAAGAGTTCCCACAGCC
TATCCAACCTCTGAATGATGTTGACGATTTGAAAAGGAGAGTGAGTATGT
TTTCTGATGGACTGTTTATAGAAAAGAAGGAAAAAGCAAAGGAAGAATTT
GTCAATAGGCTTTCTCAATTCTCCGGGCCATCTGATCATAGAAAAGAAGT
CAACTTGAATAAAGCAATCATTGAAGCACAGACTGCAGATGATGTTTTAG
AGATAACATATGAAACAATTGTTGCGGTTGCAAAAGGCCTAAGCCCTTCT
CCTCTGTCCCCATTGAACATTGCCACTGCTCTTCATCGCATTGCTAAGAA
TATGGAGAAGGTTACTATGACGAGAACTCGAAGATTGGCTTTTGCTCGAC
AAAAAGAGATGTCTATGCTTGTGAGTGTTGCGATGACAGCCTTACCTGAG
TGCTCTGCTCAAGGAATCTCTAACATATCTTGGGCACTGTCCAAAATTGG
AGGTGAACTGCTTTATTTTTCAGAAATGGATAGAATTGCAGAGGTTGCAC
TGACCAAGGTTGGGGATTTCAACTCCCAAAACATTGCTAATATAGCAGGT
GCCTTTGCTGCAATGCAGCATTCTGCTCCTGATCTTTTCTCAGAGTTGTC
GAAAAGGGCTTCAAACATAATTCACACTTTTCAAGAACAAGAGCTAGCTC
AACTTTTATGGGCTTTTGCTTCGCTATATGAGCCAGTTGACCTTGTATTT
GATTCTTTAGACATAGTCTTCAAAGATAGTTGCCAATTGAGAAGTTGCAC
AAGTGAAAAGACATCGAGTAATGATGAACAAATCAGTTTTGACAGAACTG
GTGCCTCAAATGGATCTCTGAGCTCTCCTGTACTCACTTTAACGAGGGAC
CAGCTTGGGACAATAGCTTGGTCCTATGCGGTCTTTGGACAAATGGATAG
GAGTTTCTTCTCTCATGTCTGGAAAACTCTCTGCGATTATGAGGAGCAAA
GGGTTTCAGAGTTTTACAGGGAGGATATGATGTTTGCTTCTCAAGTTCAT
CTTGTAAACCAGTGCTTGAAGCTTGAATTCCCACATCTTCAGTTGTCATT
ATGTAGTGAGTTTGAGGAGAAAGTTGCCCTTGCTGGAAAAACTAAAAGGT
TTAATCAGAAAATAACTTCATCATTTCAAAAAGAGGTTGGACGCCTACTC
ATAAGCACTGGCCTGGAATGGGTCAAAGAATATGTTGTGGATGGTTACAC
TTTGGATGCTGTGCTTGTTGATAAGAAGCTTGCTTTGGAGATTGATGGTC
CAACTCACTTCTCGAGAAATACTGGTGTGTATTTGGTTTGTGTATGTCAA
ATTTGTAACCTTCTGTTCTATAAGATCTAGTTGAATCTTAGCTAATGGTT
TGTTATTTTATATCTCTGCCTATTAGGTGTTCCATTAGGACATACCATGT
TAAAACGTCGATACATCACTGCTTGTGGTTGGAAAGTCGCATCTGTATCC
CATCTGGAGGTAAGATCTCTTATTTCTTAGATCAGACATATCTCTTCTAC
TAATTCCCTGGTATTTTTCTCATACAAAATTAAAAAAAAAAAAAAAAACC
ATATATCTGTGAAGCTGTCACAGTTTAACTCACATCTTTACTAGCACACA
TGCGGGATACAAAACAAAGTATTGTTTGAAAAATATTATTCTTGGCAATG
TAAATGCCTTTTGGCATACTGTTGTAGTGATTATCTTTCAAATTGCACCA
TGCAGAAACATTTTATCATAAACCTTTCATTATTCTAAATTTTGTTTAGG
AATAACCAATCAAGTTCACCCCAGATGCATCCTAAATTGTCATTTTGAGT
ATAAAAAACATATTACCTCTCTAACGCTCAGTTCCAGGGTAGGAGTTGTT
CCTCAGCCATACAATTTAAGTGTTTTTTATTGATAGGATATTGATTTGTC
ACAAAAGAATTTATTGATGATAGTGTTCTTTCTTACAGTGGGAGGAAACT
CAAGGGGCGTTTGAACAAGTAGAGTACCTTAGGAACATCCTCAAAAATCA
TCTAGACGAGGGATACGCCGAAACTACTCTGACTGGGGTAAAGTGATTAG
CCAATGCTGCTTGTCAAGTGTAAGGAGATATCAGATATGTATTTTTTACC
AAGCTCCCTTGATAAATTTTAGTAAAGAGGATGTATATTTCTTGGAAATA
TTTCATTTCAAAAGCATAAATACCATTTCTCCCCATTTTGTTTTGCACTA
AAATCACTCTAGTCTATAAGTTCAACACCACAAATGAATTTGGTTCATAA
TAATACACAAGATCAAATTTGACAATTGACAATTCTTAATCAATTAGCTA
TTAAAATTAACATTGCCTGTCATTTGGACCCTAATATTACCAATTACCAA
ATTAGTCTATTTCGTGTATTTAGTTCTTTGGCAACAAAGGATAGCTAGAC
CATTGTGTTCATTGCAATGTTATACAGATATTAAATATTAGACGAGAATA
TGTAATCAAGAAGTACCACTGGTAGAATAGAACCCTGCCACGGTTTAGAC
TCAGATTCGTTTCCTGTCTGTTGCACATTCAAAAGGGCTTTGGTGAAAAA
TTCTGTCCAATTGGGTGGGTCAATTGTTGGTCATCGCACACAGGTCAATG
AAGATAATGTTTCTGAGCTCTCTTATTGTTTTTTTCCTTGAGTTGTCTTT
TTTTTATGCATACAACTCTGACAATATCTCAGGTCACAGTCAAAAGATAA
TCTATGTTTGTGGAGTGCAATTTCTCCTTACCAAACACTATTTTAACATT
GCAGAAATCTGTCATAAGACCATCTTTTATTTTGTCTGGATGTTGCTTTG
AGATTTTGCATGATTAAACATATATTCTAGCAGGCCATTTCTTTACTTGG
TAGGGGATATAATTGTTGTCATAATGACGCAATGGTACCTACCAAATACC
ACAACACAAGCATACAATGCTTTCAATTTTGTTATAGCTTGAAGCTTGGG
AGGAAAGGACCGGCTTTGAATTAACCCTTTAACAACGTTTACGTTTAAGC
CTAAGTAAAATTAGTTCCATAGTTTGGTTGGGTTGAAGAAGAATATAAAA
GAAGTGAAAAATATTATTTCAGAGTGGCAATTTAATAGATTAAAAATAGG
ATTTTATTAGTTTTCGGTACCTCCAAAATTAATTTGTTTAGAAATTGGCA
CCACAAAAATTTATTTAGTTTTTTTTATACTTAACATTTAATAGATATAT
AAATTTGATTTTGATAGTAACTTTATGTAATCATCCAAAATAATTATTTG
CAAGTATGTTGGTGTTTGGAGTTCAAGATTGCCATGTTAACACCATTTAT
TCAAAATACCTAGAAAAATTACTCATCTAAGCTGACTTTATTTTGGCAAC
ACCTCCCTACTAATGGGTTTATTTTAGTCCTTTATCTATTGTAATATATA
TTAGTCTATCGTTAGACACAGTCAGAGGGCTTGCACAATGACACTGCCTA
GCCATGCTCATAAGATGACCTACTCGTATCTCTCAAATCTACACTCCTCT
GCATTACCATTGTTGTTTATCTTATTTGCTTCATTTTGTGACTATGAACT
TAGATTACAACTAAGGTAAGAACTGGATTTCTCCATTTTTGTATTTGTAT
TATGTTTTATATTTTTCTTCAATATTTTATCAAGTTCTCTTGTTTTGTAA
CAAGTGAATCGGTTTAGTATTGGTCCTTCATATTATTTTTCTTCTTCCAT
CGACCGTTGGACAGCCAATCTATCCACCCCTGATGGCAAACCTGCACTCG
GTCTCACTTTCTCACGTGCCAATGGTCTCACCCATGCAGGTTCTCTTCCT
TCAGCTGTCAAGTTAAAGCTTCTGCCTACTGAATTTTTTTTCATTAATGG
TATTTTGTTTGCTTTTTTTTTTTTTTTTGCTGTTCTGTTGGATGCTCTAC
ACATGCACTAGAAGCATCGCAATCTTACCAAGTTCCGAACTTTATTATTG
CTTGCTTGTAGTTAGATTCTTTCAATTTCAATAACTCACGTGAATTCATT
GAAAACCTGATCATGAACACCGTTTCATGAAGTGGGCTCATTCAGTTTCG
ATGCTATGCTAAGAAACTGAATCTGCTGTGTTTTATTCATTGTATTCTGA
TATTTCAATTCAATTTTTATGGTGTTTAACAAAATAGGTAATTTGGGAGG
TGGTTACATTTGTGAATTTAAATGTAATATTTGATATTGATATGGTTCTG
GCCTGGGTCTTGGATAATATAGCCCTTTCTCTGCGCTGATGATGGGTAAA
GCTAAAAGGGAACCAAAGTTTGCTATTGTGAAAGGTTGTCACTTCCAGGA
AAATCTATAGGTTAGGTTTTTCTTTCTCTCACCGAATGCTGGTTCCTTCA
TTGTGCTTGGTTTTGTTCTATTGTCAATTCTTGAAATCCTATCTAATTGA
GCTACGAAGAAGAGGTTTTTAACTAAGAAAAGAAAAATCTTATGAAGGAA
AAGTTACCCAGAGACACGTCAGGTTCGATTCTCACTCCTAGCCCCCCTTT
TAATTGGCCCTGAATCTATTGCTTTCTCCCTTTCTCTGTTGGTTTAAATT
TGTATTATTTAGTCCTAGTCATTCTGCGGCAACTTGCTTTTCTTACGGGA
TTTTGGTGGATACCAATTTTAGATTAGAGTGAGTGTGCTTTGTTTTGCCT
TAATATATACCTTTTTGTTTCTCTCTTTCTAATAAACAAATGATCATTCT
GGTTATACATACGCAATTTTCCATGGAATACACTGTTCAAATTTGCAGTA
TGTGATATGTTTGCAACTATATGTAGATGGCATGCGCTAATATGCATATG
ACGCTCATGATCTAACACTAACACTATTACGGGATAAAAATACTAAAGCA
TTTCAGTTATGGCAGATTTTTTAGTGTCTGTCTGTTTCTCACACAACACA
ATCTTTTATCAAATTCTCTTGGATATATCTGTAGGGGGTCAGGTACAAAT
TTGAATTAATCAGAAAGGGAAAAACATATCTCTTTAAACAAATTTACGAA
GGTTGTCTCTTAATCTAGGGGAGGAAAGAAATTATATTACTATCGTTTTA
TTTGTCCTTTTTATGCATAACATGATTGCCAAGGATCCTCAATTTGAGAG
AATACTAATGAAGGTACTTATGCTGCAACGGCCTTGTTTAGCAATTTGAT
TACTGATAAATGGCTCTTCAGGCTGGACGAGAAATAGTCTATTTACTGTT
CTGTTTACTTGAATTACGACCCTGAGGAATGGAAAAACAAATTTTCAATT
ATTTTTTGTTCATTTGGGATTTGTTTGAACCTTGTAAATTTCCTATCATT
TGGGATTGTGATATTTTTAAATCTCAACAGGCACAAGTGCTACATTGTTG
CAACATGTGATCGGGACTTGAAGAGTAGAATTGGGAAGGTAACGTCATTT
TTTACTTTTCATGTTTGGTTTGTTTTGATATTTGGATTTCTGTATTGCAG
ATTCCTGGTGTTCCAATTGTTGGGAATAGTCCAAGTGTGAGTCAAAAAGT
CCCACATTGGATAGAAAAGACAAAGTTAAACACTATATAAGAATAAAGAC
CCATAACAACATTGCCTTAAGGTTTTGGTGTAAAAGTGGTGTCTAAGGTC
TTATATGTGTAAGACTAATGTCATATAACCATATAGAACCATAATCTCCC
AATAACCATATGCCATAACCATGCCCATAACCGTATATGAGAAATATATA
TAACTTATCAGTGGTATCAGAGCCGATGGTTCGGAGTGACTGACCGCATA
ACCATAACCAAAGGGGTCACTCATACACACCTGAAGGGAAATATACCATA
TGAAAAAAAGAAAAAAACAAGGGACTCACCCTTGAGGGGAGATGTTGGGA
ATAGTCCAAGTGTGAGTCAAAAAGTCCCACATTGGATAGAAAAGACAAAG
TTAAACACTATATAAGAATAAAGACCCATAACAACATTGCCTTAAGGTTT
TGGTGTAAAAGTGGTGTCTAAGGTCTTATATGTGTAAGACTAATGTCATA
TAACCATATAGAACCATAATCTCCCAATAACCATATGCCATAACCATGCC
CATAACCGTATATGAGAAATATATATAACTTATCACCAATAATGTTCATC
GCGAAATACAGATGCTCTGTTGAGAAGCAACAATTGGTGGAGGTAGATAC
TCTTCTTTAGTGAAATTTATAACACGCTTAACTACTAATTTTTGAACTTA
GTTACACAAATTTGCATAGCTTTTTCTTATAAACTAGATTAATTAAGCTT
CATTGACGTTTGTTCAACTCCAAAGCTGTTTCGTAAATACACAACATATT
TGGCAATTTTGAACAATGAAACGTTTCACAATGACTTTTGAAATCAACAC
TTTATTCTGTAGAGCATTGTATTAAGCAAAAGCTGGGTGCTTTACTTTGA
GATGTTCAGTTGTTGCTTCATTTTTTCCACGAAAGTTCTATCATGCATCA
ATTGCAAGAAGATTTTGTGAAGACACAATGGTATTGACTTTGGTAAGTTC
CCTGTTAATTTGGATGTACATGCCGACAAACAAATGTGTCGTAATAACAC
TTTCAAAAAGAAGGAATATATTCTCTTTTATATTTAATTAAGTTTCAAGA
TCGTTATAAATTTATATGGTGATCGATATATAT back to topCoding sequence (CDS) from alignment at Vu10:33027526..33035108- >Vigun10g122700.1_Vu_IT97K-499-35_v1.1 ID=Vigun10g122700.1_Vu_IT97K-499-35_v1.1; Name=Vigun10g122700.1; organism=Vigna unguiculata; type=CDS; length=2013bp; location=Sequence derived from: Vu10:33027526..33035108- (Vigna unguiculata ATGGAAGGGTTATTGAATTCCTTGCTTAACCAAAGTTGCTTAAAACCCTT TGGTTTCACTCCGAGACTTGGTTATACTTTCCCAGTGGTTACAACTAGAA CTGGGAGTTTAAATCGAAAACCTGAATCCTGCACCCTGAGAAGTAATTGC ACACAATTGGGTAGAGACACTGGCGCTAGTTCCCGGAGAGCTGGTGTTGA TGCACTGGATAATGGTGGTGATGGAGAAGAATCTAATGTGGAGTGGGAAT CTGAGTTTCTTGGGGAAGTTGATCCGTTTGGTTACCGGGCTCCCACTAAG AAAAGGGAAAAAGTGCAGAGGTCAAAGTTGCTTGAAGAAACTGATGAAAT GGATTGGTGTGTGAGGGCCAGAAAGAAGGCCCTGAAATCAATTGAAGCAA GGGGCATGGGTCATCTGATTGAAGATTTGGTTACGGTTAAGAAGAAAAAG AAGGACAAGAAGAAGTTGGAAAGCAAGAAGAAAATAGTAAAGAAAATTGA GAATATCGAAGATCTTGACTTTGGCTTGGAGGAAGAGTTCCCACAGCCTA TCCAACCTCTGAATGATGTTGACGATTTGAAAAGGAGAGTGAGTATGTTT TCTGATGGACTGTTTATAGAAAAGAAGGAAAAAGCAAAGGAAGAATTTGT CAATAGGCTTTCTCAATTCTCCGGGCCATCTGATCATAGAAAAGAAGTCA ACTTGAATAAAGCAATCATTGAAGCACAGACTGCAGATGATGTTTTAGAG ATAACATATGAAACAATTGTTGCGGTTGCAAAAGGCCTAAGCCCTTCTCC TCTGTCCCCATTGAACATTGCCACTGCTCTTCATCGCATTGCTAAGAATA TGGAGAAGGTTACTATGACGAGAACTCGAAGATTGGCTTTTGCTCGACAA AAAGAGATGTCTATGCTTGTGAGTGTTGCGATGACAGCCTTACCTGAGTG CTCTGCTCAAGGAATCTCTAACATATCTTGGGCACTGTCCAAAATTGGAG GTGAACTGCTTTATTTTTCAGAAATGGATAGAATTGCAGAGGTTGCACTG ACCAAGGTTGGGGATTTCAACTCCCAAAACATTGCTAATATAGCAGGTGC CTTTGCTGCAATGCAGCATTCTGCTCCTGATCTTTTCTCAGAGTTGTCGA AAAGGGCTTCAAACATAATTCACACTTTTCAAGAACAAGAGCTAGCTCAA CTTTTATGGGCTTTTGCTTCGCTATATGAGCCAGTTGACCTTGTATTTGA TTCTTTAGACATAGTCTTCAAAGATAGTTGCCAATTGAGAAGTTGCACAA GTGAAAAGACATCGAGTAATGATGAACAAATCAGTTTTGACAGAACTGGT GCCTCAAATGGATCTCTGAGCTCTCCTGTACTCACTTTAACGAGGGACCA GCTTGGGACAATAGCTTGGTCCTATGCGGTCTTTGGACAAATGGATAGGA GTTTCTTCTCTCATGTCTGGAAAACTCTCTGCGATTATGAGGAGCAAAGG GTTTCAGAGTTTTACAGGGAGGATATGATGTTTGCTTCTCAAGTTCATCT TGTAAACCAGTGCTTGAAGCTTGAATTCCCACATCTTCAGTTGTCATTAT GTAGTGAGTTTGAGGAGAAAGTTGCCCTTGCTGGAAAAACTAAAAGGTTT AATCAGAAAATAACTTCATCATTTCAAAAAGAGGTTGGACGCCTACTCAT AAGCACTGGCCTGGAATGGGTCAAAGAATATGTTGTGGATGGTTACACTT TGGATGCTGTGCTTGTTGATAAGAAGCTTGCTTTGGAGATTGATGGTCCA ACTCACTTCTCGAGAAATACTGGTGTTCCATTAGGACATACCATGTTAAA ACGTCGATACATCACTGCTTGTGGTTGGAAAGTCGCATCTGTATCCCATC TGGAGTGGGAGGAAACTCAAGGGGCGTTTGAACAAGTAGAGTACCTTAGG AACATCCTCAAAAATCATCTAGACGAGGGATACGCCGAAACTACTCTGAC TGGGGTAAAGTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
Term | Definition |
IPR013584 | RAP |
|