Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
Vigun11g121900.1 Vigun11g121900.1_Vu_IT97K-499-35_v1.1-protein Vigna unguiculata polypeptide
Vigun11g121900.1_Vu_IT97K-499-35_v1.1 Vigun11g121900.1_Vu_IT97K-499-35_v1.1 Vigna unguiculata polypeptide
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Vigun11g121900.1.v1.1.five_prime_UTR.1 Vigun11g121900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 Vigna unguiculata five_prime_UTR
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Vigun11g121900.1.v1.1.CDS.1 Vigun11g121900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.2 Vigun11g121900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.3 Vigun11g121900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.4 Vigun11g121900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.5 Vigun11g121900.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.6 Vigun11g121900.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.7 Vigun11g121900.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.8 Vigun11g121900.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.9 Vigun11g121900.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
Vigun11g121900.1.v1.1.CDS.10 Vigun11g121900.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1 Vigna unguiculata CDS
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Vigun11g121900.1.v1.1.three_prime_UTR.1 Vigun11g121900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 Vigna unguiculata three_prime_UTR
Homology
BLAST of Vigun11g121900.1 vs. DB:Swiss
Match:
LHW_ARATH (Transcription factor LHW OS=Arabidopsis thaliana OX=3702 GN=LHW PE=1 SV=1)
HSP 1 Score: 369.007 bits (946), Expect = 1.741e-114
Identity = 205/369 (55.56%), Postives = 247/369 (66.94%), Query Frame = 1
Query: 1717 DKKATCMNLQGVRPDNSYSVKEAISDSGI------------FSGTGTDHLLDAVVSKAQSAPKQSSDEIS--CRTTLTRVSTASVSSPACNQVLSDHVLKGLFDFPKNGAKRAAGETSSLRSGCSKDEAGNCSQMTSIYGSKLSSWVENGSSVKRESS---VSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGAASSNATD 2772
DK C N GV + + +SD I + +GTDHLLDAVVS A S+ KQ SDE S C+TTLT+VS +SV++P+ +S S + + G +S+YGS++SSWVE S+KRE S V+ + +P +NRKRLKPGENPRPRPKDRQMIQDRVKELREI+PNGAKCSIDALLE+TIKHMLFLQ+V+KH+DKLKQTGESKI+ ++GG GATWA+EVGS+SMVCPI+VED+NPPR VEMLCE+RGFFLEIAD IR LGLTILKGV+E R DKIWARF VEA+RDVTRMEIFM LV +L+QT+K G S D
Sbjct: 305 DKNKGCDNSWGVSQMRTEVLTRELSDFRIIQEMDPEFGSSGYELSGTDHLLDAVVSGACSSTKQISDETSESCKTTLTKVSNSSVTTPS--------------------------HSSPQGSQLFEKKHGQPLGPSSVYGSQISSWVEQAHSLKREGSPRMVNKNETAKP----ANNRKRLKPGENPRPRPKDRQMIQDRVKELREIIPNGAKCSIDALLERTIKHMLFLQNVSKHSDKLKQTGESKIMKEDGG---------GATWAFEVGSKSMVCPIVVEDINPPRIFQVEMLCEQRGFFLEIADWIRSLGLTILKGVIETRVDKIWARFTVEASRDVTRMEIFMQLVNILEQTMKCGGNSKTILD 634 HSP 2 Score: 239.195 bits (609), Expect = 1.565e-66
Identity = 119/222 (53.60%), Postives = 153/222 (68.92%), Query Frame = 1
Query: 1 MGFLLKEVLKTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSRDAYPPQVYTELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDY-SAKVSSERLGVPVTIDPPVVTSKCTPSAA 663
MG LL+E L+++C N+WSYAVFWKIGC NS LLIWE+ Y E S P R G+ + Q ++V L N+MMLNN + + GEG+VGRA FTG++QWIL N+F+RD +PP+V E+ QFSAG+QTVAV PV+PHGVVQ GS LPIME++GFVNDVK LILQLGCVPGALLSE+Y + + +++ +GVPV+ P K S+A
Sbjct: 1 MGVLLREALRSMCVNNQWSYAVFWKIGCQNSSLLIWEECYNETESSSNPRRLCGLG-----------------VDTQGNEKVQLLTNRMMLNNRIILVGEGLVGRAAFTGHHQWILANSFNRDVHPPEVINEMLLQFSAGIQTVAVFPVVPHGVVQLGSSLPIMENLGFVNDVKGLILQLGCVPGALLSENYRTYEPAADFIGVPVSRIIPSQGHKILQSSA 205
BLAST of Vigun11g121900.1 vs. DB:Swiss
Match:
LHWL2_ARATH (Transcription factor bHLH157 OS=Arabidopsis thaliana OX=3702 GN=BHLH157 PE=1 SV=1)
HSP 1 Score: 216.468 bits (550), Expect = 1.443e-59
Identity = 111/213 (52.11%), Postives = 144/213 (67.61%), Query Frame = 1
Query: 2104 SSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVK 2742
S W+++ SS+ + K EE K +KR K GE+ RPRPKDRQMIQDR+KELR ++PNGAKCSID LL+ TIKHM+F+QS+ K+A++LKQ ESK+V E TWA EVG + +VCPI+VE+LN +M +EM+CEER FLEI ++RGLGL ILKGVME R +IWA F V+A VTR+++ SLV+L K
Sbjct: 326 SLWIDD----DERSSIGGNWKKPHEEGVK--KKRAKAGESRRPRPKDRQMIQDRIKELRGMIPNGAKCSIDTLLDLTIKHMVFMQSLAKYAERLKQPYESKLVK-----------EKERTWALEVGEEGVVCPIMVEELNREGEMQIEMVCEEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIVQAKPQVTRIQVLYSLVQLFQHHTK 521
BLAST of Vigun11g121900.1 vs. DB:Swiss
Match:
LHWL1_ARATH (Transcription factor EMB1444 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=1)
HSP 1 Score: 214.542 bits (545), Expect = 2.474e-57
Identity = 103/185 (55.68%), Postives = 136/185 (73.51%), Query Frame = 1
Query: 2179 EVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEA--NRDVTRMEIFMSLVRLL 2727
E+ K N+KR KPGE+ RPRP+DRQ+IQDR+KELRE+VPNG+KCSID+LLE TIKHMLFLQSV++HADKL ++ SK+ K+ G L + E G++WA E+G VC I+VE+L+ ML+EMLCEE FLEIA++IR L L IL+G E + +K W F VE N+ + RM+I SLV++
Sbjct: 543 EIPKKNKKRAKPGESSRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLECTIKHMLFLQSVSQHADKLTKSASSKMQHKDTGTLGISSTEQGSSWAVEIGGHLQVCSIMVENLDKEGVMLIEMLCEECSHFLEIANVIRSLELIILRGTTEKQGEKTWICFVVEGQNNKVMHRMDILWSLVQIF 727 HSP 2 Score: 92.4337 bits (228), Expect = 8.944e-18
Identity = 64/221 (28.96%), Postives = 102/221 (46.15%), Query Frame = 1
Query: 1 MGFLLKEVLKTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSRDAYPPQVYTELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSAKVSSERLGVPVTIDPPVVTSKCTPSAA 663
MG+ L+++L+++CS W+YAVFWK+ ++ +L ED Y P + G D +G + KM + V GEG+VG+ +G +QWI + QV+ Q SAG++T+ ++ V GVVQ GSL + ED V +++L L L P A D+++ + + P D P + SKC A+
Sbjct: 1 MGYTLQQILRSICSNTDWNYAVFWKLNHHSPMVLTLEDVYCVNHERGLMPESL-------------------HGGRHAHDPLGLAVAKMSYH--VHSLGEGIVGQVAISGQHQWIFSEYLNDSHSTLQVHNGWESQISAGIKTILIVAVGSCGVVQLGSLCKVEEDPALVTHIRHLFLAL-TDPLA----DHASNLMQCDINSPS--DRPKIPSKCLHEAS 193
BLAST of Vigun11g121900.1 vs. DB:Swiss
Match:
LHWL3_ARATH (Transcription factor bHLH155 OS=Arabidopsis thaliana OX=3702 GN=BHLH155 PE=1 SV=1)
HSP 1 Score: 201.06 bits (510), Expect = 7.903e-53
Identity = 99/185 (53.51%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 2179 EVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEA--NRDVTRMEIFMSLVRLL 2727
++ K N+KR KPGE+ RPRP+DRQ+IQDR+KELRE+VPNG+KCSID+LLE+TIKHMLFLQ+VTKHA+KL ++ K+ KE G+ G++ A EVG V IIVE+LN +L+EMLCEE G FLEIA++IR L L IL+G E + +K W F E+ ++ + RM+I SLV++
Sbjct: 535 DIPKKNKKRAKPGESSRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQNVTKHAEKLSKSANEKMQQKETGM-------QGSSCAVEVGGHLQVSSIIVENLNKQGMVLIEMLCEECGHFLEIANVIRSLDLVILRGFTETQGEKTWICFVTESQNSKVMQRMDILWSLVQIF 712 HSP 2 Score: 92.4337 bits (228), Expect = 8.672e-18
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 1 MGFLLKEVLKTLCSRNRWSYAVFWKIGCNNSKL-LIWEDHYYEPLPSPFPPRHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSRDAYPPQVYTELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQL 540
MG +E+LK+ C W YAVFW++ S++ L ED YY+ + H D +G + KM + V GEG+VG+ +G +QW+ N++ + + Q SAG++T+ V+ V P GVVQ GSL + ED+ FVN +++L L L
Sbjct: 1 MGSTSQEILKSFCFNTDWDYAVFWQLNHRGSRMVLTLEDAYYDHHGTNMHGAH---------------------------DPLGLAVAKMSYH--VYSLGEGIVGQVAVSGEHQWVFPENYNNCNSAFEFHNVWESQISAGIKTILVVAVGPCGVVQLGSLCKVNEDVNFVNHIRHLFLAL 152
BLAST of Vigun11g121900.1 vs. DB:Swiss
Match:
RSS3_ORYSJ (Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RSS3 PE=1 SV=1)
HSP 1 Score: 73.1738 bits (178), Expect = 4.815e-12
Identity = 62/217 (28.57%), Postives = 99/217 (45.62%), Query Frame = 1
Query: 13 LKEVLKTLCSRNRWSYAVFWKI----------GC-----NNSKLLIWEDHYYEPLPSPFPPRHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWIL---------MNNF---SRDAYPPQVYTELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSA 582
L E L+ +C + W+Y+VFW I GC N S +L+WED + P +E I ED V +KM + + GEG++G+ ++W+ + N+ S DA PP+ +T+ QF++G+QT+AVI HG++Q GS I ED+ FV ++++ LG G LS+ +S+
Sbjct: 31 LHEALRNVCLNSDWTYSVFWTIRPRPRCRGGNGCKVGDDNGSLMLMWEDGFCRPR------------------------VAECLEDIDGEDPVRKAFSKMSIQ--LYNYGEGLMGKVASDKCHKWVFKEPSECEPNIANYWQSSFDALPPE-WTD---QFASGIQTIAVIQAG-HGLLQLGSCKIIPEDLHFVLRMRHMFESLGYQSGFFLSQLFSS 216
The following BLAST results are available for this feature:
BLAST of Vigun11g121900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot )
Total hits: 5
500 1000 1500 2000 2500 3000 Expect = 1.56e-66 / Id = 55.56 Expect = 1.74e-114 / Id = 55.56 Expect = 1.44e-59 / Id = 52.11 Expect = 8.94e-18 / Id = 55.68 Expect = 2.47e-57 / Id = 55.68 Expect = 8.67e-18 / Id = 53.51 Expect = 7.90e-53 / Id = 53.51 Expect = 4.82e-12 / Id = 28.57 Sequence LHW_ARATH LHWL2_ARATH LHWL1_ARATH LHWL3_ARATH RSS3_ORYSJ
Match Name E-value Identity Description
LHW_ARATH 1.741e-114 55.56 Transcription factor LHW OS=Arabidopsis thaliana O... [more]
LHWL2_ARATH 1.443e-59 52.11 Transcription factor bHLH157 OS=Arabidopsis thalia... [more]
LHWL1_ARATH 2.474e-57 55.68 Transcription factor EMB1444 OS=Arabidopsis thalia... [more]
LHWL3_ARATH 7.903e-53 53.51 Transcription factor bHLH155 OS=Arabidopsis thalia... [more]
RSS3_ORYSJ 4.815e-12 28.57 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subs... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Vigun11g121900.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g121900.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g121900.1; organism=Vigna unguiculata; type=mRNA; length=3386bp CCATTGCGTTGGAAAAAGGATAACTTTTTACCGGTTTCGGAAACCCTTTT GCGAGAAACCAAATGGGGTTTTTGCTCAAAGAGGTTTTGAAGACTCTGTG CTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACA ATTCCAAGCTGTTAATCTGGGAAGATCATTACTATGAACCCTTGCCATCT CCTTTCCCTCCACGCCATGTTGGGATGTCTAATTTTCCATACCGTGACGG GGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGG ACAGAGTCGGTGGATTGATTAACAAAATGATGCTGAATAATTCAGTCAGT ATTGCTGGAGAAGGGATGGTTGGACGGGCAACATTTACAGGAAACTATCA GTGGATTCTTATGAACAATTTCAGTAGAGATGCATATCCACCACAGGTGT ATACTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTT ATTCCTGTGCTTCCTCATGGGGTTGTTCAATTTGGTTCTTTATTGCCAAT AATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAAT TGGGATGTGTACCTGGTGCCCTTCTTTCTGAAGACTATTCAGCAAAAGTT TCTAGTGAAAGACTTGGTGTACCTGTCACTATTGATCCACCTGTCGTTAC GTCTAAATGCACTCCCTCTGCAGCTAATGGCTCCAACCAACTAACTGATT CTACTATTGCTTCAAGGTCTATTGCTCCATCACCTCATCCGCCAAGGCAA GAAATAGATAATTACCAGGCTTCTGTATTGACACCTCAAACCTATGACCA AAACCAAATATTTGATAGCATTTGCCAACCAAAATCTCATTCAATGATCA AAACAATTGCCTATGGCCAGCAGAAGAAGACAGTGGTCCATGCTGAAGCT AAAGTGATACCTACAAATTTTGATTCATGTATGCAACAACCTTCTGCTTA TAATTCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATC TGAGTTGCAACCTTAACTATATGGAACAACAAACATCAGGTGTTGGAAGA CAGAGTCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAATATGCC TCAACTGAAAACAGGTGCAGGCAAAATTCTTGAACAGAATCAGAGTTCTG GTGGCAGTTCACTATTTGGAGGAATCCCAATGTGTGGTGGGAGTAATCTT TTGAGGACAAATATGATTAACTGCTCTGTTTCGAATTCTCCCAAAGTACC ACCCACTTCTGAATTTTCTGGAAGTCACAAGCTTGAGTTTGGGCTTCAAA ATAACAATTCAACAACTGATGCTGGACTCTGTTCTGTGCCTACTTTCTGT AATCAATCAGTTACCAGTCACGTGAATCTTGAAAACTCTGCTCAGAAGAA CCTTCCCATTGATTTAAAGCATGCTTTCGTTTCAACTGAACAAAGGATAC CCGATGATTTGCTTCATACCGCCCTTAATATTCCGTCTCTTCATCTTGAG GAGAATGAGCCTATGAGAGATCATATTCCTGGTTTTGTTCAAGATTGCCT CAATAAAGATGTTACTGGTATGGTGAAAATGAATGTTAAGCATGAAGACA CCTATACTCAACTTCCATCGGGGGATGATCTCTTCGATGTTTTAGGTGTG GATTTGAAAAGGCAACTACTCAATGGAAACTGGGATAATTTACTTGCCAC TGATTCAGAGGCCAACAGAGAAAATCTAGATAAAAAGGCAACATGCATGA ATTTGCAAGGTGTACGTCCTGATAACAGCTATTCAGTTAAAGAAGCAATA TCAGACAGTGGCATCTTCTCTGGAACCGGCACCGACCACCTCTTAGATGC TGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAAAGTTCTGATGAAATTT CTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCTGTTTCCTCTCCT GCCTGCAACCAGGTTCTATCTGATCATGTCTTAAAGGGATTGTTTGATTT TCCCAAGAACGGGGCTAAAAGAGCTGCTGGGGAAACCAGTTCTCTTAGGT CTGGCTGCAGCAAGGATGAGGCTGGAAACTGCTCTCAAATGACTTCCATA TATGGTTCTAAGCTTAGTTCATGGGTTGAGAATGGTAGTAGTGTGAAACG TGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCGGAAGAAGTTTGCA AATCAAATAGGAAAAGGCTTAAACCTGGAGAGAATCCCAGACCTCGGCCT AAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAGTTAAGGGAAATTGT GCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCA AGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGTTGAAA CAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAA AGATAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAAT CTATGGTTTGTCCAATCATTGTCGAGGATCTTAATCCACCTCGTCAGATG CTAGTAGAGATGCTTTGTGAGGAAAGGGGTTTCTTTCTGGAAATAGCTGA CTTAATCAGAGGATTAGGATTAACCATCTTGAAGGGGGTTATGGAAGCTC GTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCCAACAGGGATGTG ACGAGGATGGAAATATTCATGTCACTGGTTCGTCTTTTGGATCAAACAGT GAAGGGTGGTGCAGCTTCATCGAACGCAACTGATAACAACATGATGATGT ATCATTCTTTTCCACAAGCTACCCAGATAGCAGCAACTGGTAGGCCTAGT AGTTTGCAATGAAGCATCATCCACTTGTAGTTCTTGGCATCAAATTCACT CTAAAAAACTTAATATGAACATAACTTAGTGAAGGGCatttgaaatgcat ttgtatttgtattatgtaCATGCATGTTTCCTCCAGTGCCTTCCAAAGCC AGTGTTGTTGGCAGTGTCTACTGGTGCTTTAGGCAACTTAGATAACTTGC ATTTTTTCTTTCTCTTGTGTGAGTAATGCCATTGGTCACCAACTGGGATA AGGCTTTTTTATTGATGTTGTTGATGAGCAATGCCATTGGTATTGTTGTA TAGAAACTGTAGGATCTGCAAAGGGCTCTTGCATGTGTTGCTCTTTTATG ACACCATTTTTCACCATGTTTTTTCTTTCTTGGAGTGGTGATATTGGCTC TGTTATAATATACACTTTGTATTAATATCAGCTTTGTGTGGTTTGTATAC CAGTCTAAGCTAAATGACAGTAATCATGCATCCATG back to top protein sequence of Vigun11g121900.1_Vu_IT97K-499-35_v1.1
>Vigun11g121900.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g121900.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g121900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=950bp MGFLLKEVLKTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPP RHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGE GMVGRATFTGNYQWILMNNFSRDAYPPQVYTELHYQFSAGMQTVAVIPVL PHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSAKVSSER LGVPVTIDPPVVTSKCTPSAANGSNQLTDSTIASRSIAPSPHPPRQEIDN YQASVLTPQTYDQNQIFDSICQPKSHSMIKTIAYGQQKKTVVHAEAKVIP TNFDSCMQQPSAYNSRSAFNELAGFNQSNLSCNLNYMEQQTSGVGRQSHV NPNMNPSSASNMPQLKTGAGKILEQNQSSGGSSLFGGIPMCGGSNLLRTN MINCSVSNSPKVPPTSEFSGSHKLEFGLQNNNSTTDAGLCSVPTFCNQSV TSHVNLENSAQKNLPIDLKHAFVSTEQRIPDDLLHTALNIPSLHLEENEP MRDHIPGFVQDCLNKDVTGMVKMNVKHEDTYTQLPSGDDLFDVLGVDLKR QLLNGNWDNLLATDSEANRENLDKKATCMNLQGVRPDNSYSVKEAISDSG IFSGTGTDHLLDAVVSKAQSAPKQSSDEISCRTTLTRVSTASVSSPACNQ VLSDHVLKGLFDFPKNGAKRAAGETSSLRSGCSKDEAGNCSQMTSIYGSK LSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQ MIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGE SKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEM LCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRME IFMSLVRLLDQTVKGGAASSNATDNNMMMYHSFPQATQIAATGRPSSLQ* back to top mRNA from alignment at Vu11:32906715..32912491+
Legend: five_prime_UTR polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun11g121900.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g121900.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g121900.1; organism=Vigna unguiculata; type=mRNA; length=5777bp; location=Sequence derived from: Vu11:32906715..32912491+ (Vigna unguiculataCCATTGCGTTGGAAAAAGGATAACTTTTTACCGGTTTCGGAAACCCTTTT
GCGAGAAACCAA ATGGGGTTTTTGCTCAAAGAGGTTTTGAAGACTCTGTG
CTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACA
ATTCCAA GTGAGTTTCAAATGCCTTTTCTTTGTGTCTCGTGCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTTTAGCTTGTGAGAAATTCAGAGAGAATCA
GGTTGGCTTGTTGGTTTTTTTTTTTTTTGTTTTCGGTTGGATGTGATTTT
GATGCTCGTACTTTCAAAGAGGGGATCTCAAGTGCTTAGATTCTATTTCC
GGGGTTGCTTCGTTTTCGAGATAAAGTCCACTTGTTAGTTCCTGTTTTGG
AACTTTATTTGGGCCTTTGTTGCTTCTCTTCTGTTTTGTTTTCAAGAATC
TTTTGTTTTTTTTTTTTTAAAACATAAGTTTGTTTTTTTAGCTAAAAAGA
AGTTTATTTGCCTTGATTTGTAAAGGAACTATCCATTGATTCAGTACTTG
TTTGATTCTGTTTGGTCTTATCTTCTTGTGTCGTTAATAAAAATCTGACC
CTTTTCTTCTTGAGCTAATTTGAAACGTTGCCGGTTTAATCTTATAATCT
CTCTATTTAATACTAATCACCATGATGCTTTGAGTATTCTGTTGAAAAAT
CCGTTAAACTTTTAAGCTTTAAATAGTTAGATTCCTGAATCAATTACAAG
TGGGAAAAAGGGTTTACTTAGCTCGGGATCTTCAATTTGAAGCTTGTAAT
TTTGAAAAGAATTATGAACTATAATTAGTAGTTTGTGCTTGGTTTTATGT
ATTGTTTTGTAGGTAGACATTAACTACAAACATAGAAAACTGCTACTTTA
TTTATTTTCTTTCCTTAATCTCCTGTAAACCTTTTCTTTTGTTTTTTAAC
CAAACATATGAATCTATTGTTGCTTGTCTTCTAACTTTTGTGTTTGCTTT
CCCATAATGTTTTCTAACCTGCAAGATAGACGCCAAAATATTATGCTTTG
ACTTTAGCCCTGATTGCAGCCATGGTTTGTTTGTTTGAGTTAACTGAGTA
TGGTTTACTTGTCAGGCTGTTAATCTGGGAAGATCATTACTATGAACCCT
TGCCATCTCCTTTCCCTCCACGCCATGTTGGGATGTCTAATTTTCCATAC
CGTGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCA
GGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGCTGAATAATT
CAGTCAGTATTGCTGGAGAAGG GTTGGTCCTCATTTTCATTGCTTATTAT
TATCAATGTTTCAAGTGTTTTCCTTCTCATTCCCATCTTACTCAAGTGCT
GTCTTTTGTTGTTAACCAGGATGGTTGGACGGGCAACATTTACAGGAAAC
TATCAGTGGATTCTTATGAACAATTTCAGTAGAGATGCATATCCACCACA
G GTATGGAGTTGATTCTAATCCCTCAGGATTATGTGCTAGTAGTTTATGA
TGAATATCTTGGTTTCCTTTTGAAGTTTGATGGTAAGGCACATAAATTTT
CTATAATTTTCCATTGTCTTGGTCAAATGAGTGTATATTAATGTAGTATA
AGAAGTGCATAACATAAGCCTCTTTTATGTGATAGAGTGTATTTATTCCA
ATAATGATCAAAGGCTTGGAGTAGGTGAACATATGAGCTTCTTTTTCATT
TCTCTTTATTGCTGTCTTTTTTGTAGGTGTATACTGAGTTGCATTACCAA
TTTTCTGCTGGAATGCAG GTTTGTGATTTTTTTTTTTTTTTTTTTATGTT
TCACAGTACCAGTTATTATCCTGAGTTGGATTTTTATTACTGTTTCTTAA
TTGTGGACTACTATTGTTTGCAGACAGTAGCAGTTATTCCTGTGCTTCCT
CATGGGGTTGTTCAATTTGGTTCTTTATTGCCA GTAAGTCTTTCTCAAGC
TTTCTGTAGTTTTTTAGAAACTTAAGACCATGTCTGAAGTGATATATTTT
GATGGAAAATGGGATTATGATGAGAAGTCACATTCTTTGGATCATAAATA
AGTGCTTCAGGTCAACTTAAAAGCCATATATCATTCATGGCATGAATGTG
TCCATCCTTGAAAACTGAAAGAGTGGCATTCTTATGCTTAGAATGTGTCT
ATCCTAGTTCATGATTGTGAACATACATTTTCTGGTGCCCTGATGCTAGC
TAATGCAGCCATTCAATCTTGTTACTGCAGATAATGGAAGATATTGGATT
TGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTACCTGGTG
CCCTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAGTGAAAGACTTGGT
GTACCTGTCACTATTGATCCACCTGTCGTTACGTCTAAATGCACTCCCTC
TGCAGCTAATGGCTCCAACCAACTAACTGATTCTACTATTGCTTCAAGGT
CTATTGCTCCATCACCTCATCCGCCAAGGCAAGAAATAGATAATTACCAG
GCTTCTGTATTGACACCTCAAACCTATGACCAAAACCAAATATTTGATAG
CATTTGCCAACCAAAATCTCATTCAATGATCAAAACAATTGCCTATGGCC
AGCAGAAGAAGACAGTGGTCCATGCTGAAGCTAAAGTGATACCTACAAAT
TTTGATTCATGTATGCAACAACCTTCTGCTTATAATTCCAGATCTGCATT
CAATGAATTAGCTGGCTTCAATCAATCAAATCTGAGTTGCAACCTTAACT
ATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCACGTTAATCCC
AACATGAATCCATCAAGTGCCTCAAATATGCCTCAACTGAAAACAGGTGC
AGGCAAAATTCTTGAACAGAATCAGAGTTCTGGTGGCAGTTCACTATTTG
GAGGAATCCCAATGTGTGGTGGGAGTAATCTTTTGAGGACAAATATGATT
AACTGCTCTGTTTCGAATTCTCCCAAAGTACCACCCACTTCTGAATTTTC
TGGAAGTCACAAGCTTGAGTTTGGGCTTCAAAATAACAATTCAACAACTG
ATGCTGGACTCTGTTCTGTGCCTACTTTCTGTAATCAATCAGTTACCAGT
CACGTGAATCTTGAAAACTCTGCTCAGAAGAACCTTCCCATTGATTTAAA
GCATGCTTTCGTTTCAACTGAACAAAGGATACCCGATGATTTGCTTCATA
CCGCCCTTAATATTCCGTCTCTTCATCTTGAGGAGAATGAGCCTATGAGA
GATCATATTCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTGG
TATGGTGAAAATGAATGTTAAGCATGAAGACACCTATACTCAACTTCCAT
CGGGGGATGATCTCTTCGATGTTTTAGGTGTGGATTTGAAAAGGCAACTA
CTCAATGGAAACTGGGATAATTTACTTGCCACTGATTCAGAGGCCAACAG
AGAAAATCTAGATAAAAAGGCAACATGCATGAATTTGCAAGGTGTACGTC
CTGATAACAGCTATTCAGTTAAAGAAGCAATATCAGACAGTGGCATCTTC
TCTGGAACCGGCACCGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCA
ATCTGCTCCAAAACAAAGTTCTGATGAAATTTCTTGCAGGACAACATTGA
CAAGGGTTAGTACTGCCTCTGTTTCCTCTCCTGCCTGCAACCAGGTTCTA
TCTGATCATGTCTTAAAGGGATTGTTTGATTTTCCCAAGAACGGGGCTAA
AAGAGCTGCTGGGGAAACCAGTTCTCTTAGGTCTGGCTGCAGCAAGGATG
AGGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGT
TCATGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGTTTCAAC
TGGATACTCTAAGAGACCGGAAGAAGTTTGCAAATCAAATAGGAAAAGGC
TTAAACCTGGAGAGAATCCCAGACCTCGGCCTAAAGATCGCCAAATGATT
CAAGATCGTGTTAAAGAGTTAAGGGAAATTGTGCCAAATGGAGCAAAA GT
ATGTAGTCTTTCTTGTGCTCTCTTACATATCAGTCCTGAACTTTTTGTTT
AGTTATCAGATCTAGGTGCTGATTTTATTTTCTTCAATTTCTTATCATAA
TTCAACAGTGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATG
CTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGTTGAAACAGACAGG
GGAATCTAAG GTATAAATATCATCATCCACTGCTTTTTTTGTCAGTATGT
TAGATTCAGGCAACTTATCTAGTTATGGTATCGCAATTGTTTTCGTTTTC
ACCAGCATTGTATTGATATGTTGAATAAAAGAAGGATGAATAGCTGATTC
ATTGTACTGAAAATTCATTCTTTCCTGAATATGCAGATTGTTAGTAAAGA
AGGTGGGTTGCTATTAAAAGATAACTTCGAGGGAGGGGCTACATGGGCAT
ATGAGGTTGGCTCGCAATCTATGGTTTGTCCAATCATTGTCGAGGATCTT
AATCCACCTCGTCAGATGCTAGTAGAG GTAATTATTGAAGCTTTATAATT
TTGTAACATCCCTTTATCCATTAAGTGTAAGTGTTGGAGTCCACATTCTC
TACTGCATTTTTTGGTGTTGTCATTTGCTGAGCATTAATGATACACTGAT
GTTGGTACTTTAAAAATCTTTTTAATATATTTTTAAATATCAAAATCAGT
GTTCATCCGTGTATTTTGAAGACACAGCAGATAAACAACACAGACAAACT
CAGCAGAGAATCTAAATTCTCAAGTGTTGTTGCCTCTAATATGTTGTATT
TGCTTGGTTTTTGCAGATGCTTTGTGAGGAAAGGGGTTTCTTTCTGGAAA
TAGCTGACTTAATCAGAGGATTAGGATTAACCATCTTGAAGGGGGTTATG
GAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAG GTAATACA
CTGTCAAGGGAAATAAATGATCATAACTCACCACAAGTATTATTTTGGTA
GTGACATTATAAATTTTTGTTTGCAGGCCAACAGGGATGTGACGAGGATG
GAAATATTCATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGG
TGCAGCTTCATCGAACGCAACTGATAACAACATGATGATGTATCATTCTT
TTCCACAAGCTACCCAGATAGCAGCAACTGGTAGGCCTAGTAGTTTGCAA
TGA AGCATCATCCACTTGTAGTTCTTGGCATCAAATTCACTCTAAAAAAC
TTAATATGAACATAACTTAGTGAAGGGCATTTGAAATGCATTTGTATTTG
TATTATGTACATGCATGTTTCCTCCAGTGCCTTCCAAAGCCAGTGTTGTT
GGCAGTGTCTACTGGTGCTTTAGGCAACTTAGATAACTTGCATTTTTTCT
TTCTCTTGTGTGAGTAATGCCATTGGTCACCAACTGGGATAAGGCTTTTT
TATTGATGTTGTTGATGAGCAATGCCATTGGTATTGTTGTATAGAAACTG
TAGGATCTGCAAAGGGCTCTTGCATGTGTTGCTCTTTTATGACACCATTT
TTCACCATGTTTTTTCTTTCTTGGAGTGGTGATATTGGCTCTGTTATAAT
ATACACTTTGTATTAATATCAGCTTTGTGTGGTTTGTATACCAGTCTAAG
CTAAATGACAGTAATCATGCATCCATG back to top Coding sequence (CDS) from alignment at Vu11:32906715..32912491+
>Vigun11g121900.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g121900.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g121900.1; organism=Vigna unguiculata; type=CDS; length=2850bp; location=Sequence derived from: Vu11:32906715..32912491+ (Vigna unguiculata ATGGGGTTTTTGCTCAAAGAGGTTTTGAAGACTCTGTGCTCAAGGAATCG CTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGT TAATCTGGGAAGATCATTACTATGAACCCTTGCCATCTCCTTTCCCTCCA CGCCATGTTGGGATGTCTAATTTTCCATACCGTGACGGGGAAGGGTGCTG GTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTG GATTGATTAACAAAATGATGCTGAATAATTCAGTCAGTATTGCTGGAGAA GGGATGGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTAT GAACAATTTCAGTAGAGATGCATATCCACCACAGGTGTATACTGAGTTGC ATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTT CCTCATGGGGTTGTTCAATTTGGTTCTTTATTGCCAATAATGGAAGATAT TGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTAC CTGGTGCCCTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAGTGAAAGA CTTGGTGTACCTGTCACTATTGATCCACCTGTCGTTACGTCTAAATGCAC TCCCTCTGCAGCTAATGGCTCCAACCAACTAACTGATTCTACTATTGCTT CAAGGTCTATTGCTCCATCACCTCATCCGCCAAGGCAAGAAATAGATAAT TACCAGGCTTCTGTATTGACACCTCAAACCTATGACCAAAACCAAATATT TGATAGCATTTGCCAACCAAAATCTCATTCAATGATCAAAACAATTGCCT ATGGCCAGCAGAAGAAGACAGTGGTCCATGCTGAAGCTAAAGTGATACCT ACAAATTTTGATTCATGTATGCAACAACCTTCTGCTTATAATTCCAGATC TGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATCTGAGTTGCAACC TTAACTATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCACGTT AATCCCAACATGAATCCATCAAGTGCCTCAAATATGCCTCAACTGAAAAC AGGTGCAGGCAAAATTCTTGAACAGAATCAGAGTTCTGGTGGCAGTTCAC TATTTGGAGGAATCCCAATGTGTGGTGGGAGTAATCTTTTGAGGACAAAT ATGATTAACTGCTCTGTTTCGAATTCTCCCAAAGTACCACCCACTTCTGA ATTTTCTGGAAGTCACAAGCTTGAGTTTGGGCTTCAAAATAACAATTCAA CAACTGATGCTGGACTCTGTTCTGTGCCTACTTTCTGTAATCAATCAGTT ACCAGTCACGTGAATCTTGAAAACTCTGCTCAGAAGAACCTTCCCATTGA TTTAAAGCATGCTTTCGTTTCAACTGAACAAAGGATACCCGATGATTTGC TTCATACCGCCCTTAATATTCCGTCTCTTCATCTTGAGGAGAATGAGCCT ATGAGAGATCATATTCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGT TACTGGTATGGTGAAAATGAATGTTAAGCATGAAGACACCTATACTCAAC TTCCATCGGGGGATGATCTCTTCGATGTTTTAGGTGTGGATTTGAAAAGG CAACTACTCAATGGAAACTGGGATAATTTACTTGCCACTGATTCAGAGGC CAACAGAGAAAATCTAGATAAAAAGGCAACATGCATGAATTTGCAAGGTG TACGTCCTGATAACAGCTATTCAGTTAAAGAAGCAATATCAGACAGTGGC ATCTTCTCTGGAACCGGCACCGACCACCTCTTAGATGCTGTTGTTTCAAA AGCTCAATCTGCTCCAAAACAAAGTTCTGATGAAATTTCTTGCAGGACAA CATTGACAAGGGTTAGTACTGCCTCTGTTTCCTCTCCTGCCTGCAACCAG GTTCTATCTGATCATGTCTTAAAGGGATTGTTTGATTTTCCCAAGAACGG GGCTAAAAGAGCTGCTGGGGAAACCAGTTCTCTTAGGTCTGGCTGCAGCA AGGATGAGGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAG CTTAGTTCATGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGT TTCAACTGGATACTCTAAGAGACCGGAAGAAGTTTGCAAATCAAATAGGA AAAGGCTTAAACCTGGAGAGAATCCCAGACCTCGGCCTAAAGATCGCCAA ATGATTCAAGATCGTGTTAAAGAGTTAAGGGAAATTGTGCCAAATGGAGC AAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTT TCCTGCAAAGTGTAACAAAGCATGCTGACAAGTTGAAACAGACAGGGGAA TCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAAAGATAACTTCGA GGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCTATGGTTTGTC CAATCATTGTCGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATG CTTTGTGAGGAAAGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGG ATTAGGATTAACCATCTTGAAGGGGGTTATGGAAGCTCGTAATGACAAGA TCTGGGCACGCTTTGCAGTTGAGGCCAACAGGGATGTGACGAGGATGGAA ATATTCATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGC AGCTTCATCGAACGCAACTGATAACAACATGATGATGTATCATTCTTTTC CACAAGCTACCCAGATAGCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA back to top