Vigun11g123500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 5.179e-105 Identity = 156/272 (57.35%), Postives = 196/272 (72.06%), Query Frame = 1 Query: 1 MGSASLVFAAVARRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDD----EGIAALYSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGLCAF 798 M + S V A+ARRLEGKVALITGGASGIGE+TA+L ++HGAKV IAD+QDELGHSV + I +S Y+HCDVT E+ V+ AVD VS +GKLDIM +NAG P I+ N+K+DFE V +VN+ G FL MKHAARVM P R G+II+TAS+S +GG +SHAY SKH ++GL RN AVELG GIRVNC+SP+ +PT + + F + E + NLKG +DVA A +YLASDE+KYVSGH+L +DGGFSV N+ + F Sbjct: 1 MAATSQVLTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNSTYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNVTGVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGLTRNLAVELGQFGIRVNCLSPFGLPTALGKKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALYLASDEAKYVSGHNLFIDGGFSVCNSVIKVF 272
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.440e-90 Identity = 161/272 (59.19%), Postives = 192/272 (70.59%), Query Frame = 1 Query: 1 MGSASLVFAAVARRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDDEGIAALY---SNLKGV-TLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGLCAF 798 M + S +A AR+L GKVA+ITGGASGIG TARL KHGA+VV+ADIQDELG S+ ++ D+S YVHCDVT E V AVD AV+RFGKLD+M NNAG G + K DFE V+ VNLVG FLG KHAARVMAP RRGSII+TAS+S + G ASHAYT SKH +VG NAA ELG GIRVNCVSP V TP++R + DDE I A+ +NLKG LKA D+A A ++LASD+ +YVSG +L VDGG SV+N+ F Sbjct: 1 MAAGSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFF 272
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 1.796e-87 Identity = 141/265 (53.21%), Postives = 178/265 (67.17%), Query Frame = 1 Query: 40 RLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI---DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDDEGIAALY---------SNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGLCAF 798 RLEGKVAL+TGGASGIGES ARL +HGAK+ I D+QDELG VS+ + + Y HCDVT E+ V RAVD ++G +DIM NNAG G I ++F++V ++N+ G FLGMKHAAR+M P +GSI++ ASVS + G H YT +KH +VGL ++ A ELG GIRVNCVSPYAVPT +S +L + AL +NLKGV L DVAEAV+YLA++ESKYVSG +LV+DGGFS+ N L F Sbjct: 2 RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVNCVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEESKYVSGLNLVIDGGFSIANHTLQVF 266
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.316e-80 Identity = 132/257 (51.36%), Postives = 182/257 (70.82%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDID-SSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTI-GAWNP-SIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDDEGIAALYS---NLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGL 789 +RLEGKVA+ITGGASGIG TA L ++GAKVVIADIQD+LG +++ + + Y+HCDV+KE+ V VDT V+++G+LDIM NNAG I G P S++ ++KSD + +++VNL GAFLG KHA RVM R+G I+ T+S+ + G++ HAY SK G+ GL +N ELG GIRVNC+SPY + T +S N + E + A+ S L G TL+A +A+A ++LASDE+ YVSG ++VVDGG+SV+N L Sbjct: 9 KRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSKEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNCISPYGLVTGIS-NISEANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRL 264
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 7.579e-80 Identity = 132/263 (50.19%), Postives = 181/263 (68.82%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDID-SSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTI-GAWNP-SIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMS---------RNFLNTDDEGIAALYSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGL 789 +RLEGKVA+ITGGASGIG TA L ++GAKVVIADIQD+LG +++ + + Y+HCDV+KE+ V VDT V+++G+LDIM NNAG I G P S++ ++KSD + +++VNL GAFLG KHA RVM R+G I+ T+SV + G++ HAY SK G+ GL +N ELG GIRVNC+SPY + T +S R F+ E + + L G TL+A +A+A ++LASDE+ YVSG ++VVDGG+SV+N L Sbjct: 9 KRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILFTSSVCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNCISPYGLVTGVSNVSGEGEANREFV----EAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRL 267
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=ABA2 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.217e-78 Identity = 138/269 (51.30%), Postives = 177/269 (65.80%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI------DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFL----NTDD-----EGIAALYSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGLCAF 798 +RL GKVALITGGA+GIGES RL KHGAKV I D+QD+LG V K + +++ ++H DV E+ + AVD AV FG LDI+ NNAG GA P I + S+FE +VN+ GAFL MKHAARVM P ++GSI++ SV G +GGV H+Y SKH ++GL R+ A ELG GIRVNCVSPYAV T ++ L T+D AA +NLKGV L DVA AV++LASD+S+Y+SG +L++DGGF+ N F Sbjct: 16 QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSFKVF 284
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 5.050e-76 Identity = 132/266 (49.62%), Postives = 172/266 (64.66%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDIDSS------IYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAW--NPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPF-RRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDDEGIAAL------------YSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFS 771 +RLEGKVA+ITGGA GIG++T L A+HGA VVIAD+ + G S++K + S ++ CDV+ E VE V+ V+R+G+LDI+ NNAG +G + SI+ +F+ V+ VN+ G LGMKH AR M +G II+TASV+G +GG+ HAYT SKH IVGL +NAA ELG GIRVNC+SP+ V T M N G +NLKG TL+A D+AEA +YLASDESKYV+GH+LVVDGG + Sbjct: 30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVVDGGVT 295
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.643e-73 Identity = 123/253 (48.62%), Postives = 168/253 (66.40%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFR-RGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDD---EGIAALYSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVM 777 +RL+GK+ +ITGGASGIG + RL +HGA+VVI D+QDELG +V+ I D + Y HCDVT E VE AV V ++GKLD++ +NAG I + SI+ ++ + I +NL G +KHAAR M RGSI+ T SV+ + G A H YT SKHG++GL+++A+ LG GIRVN V+P+ V TP+ N + E + +NLKG+ LKA+ VAEA ++LASDES YVSG +L VDGG+SV+ Sbjct: 4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPF-VSILDLNLNELDRTIAINLRGTAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQNLAVDGGYSVV 255
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.716e-71 Identity = 136/287 (47.39%), Postives = 183/287 (63.76%), Query Frame = 1 Query: 10 ASLVFAAVARRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDIDSSI-YVHCDVTKEEHVERAVDTAVSRFG-KLDIMHNNAGTIGAWNP---SIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVASHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNT----------------------DDEGIAAL------YSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFS 771 A+ V + +RL+GKVA++TGGA GIGE+ RL AKHGA+VVIADI D G +++ + + +V CDV+ E+ V RAVD A+SR G +LD+ NNAG +G SI+ ++F+ V+ VN +GA LGMKHAAR MAP R GSI++ ASV+ LGG+ HAYT SKH IVGL +NAA EL G+RVNCVSP+ V TPM N D+ + + + LKG TL+ +D+AEAV++LASDE++Y+SGH+LVVDGG + Sbjct: 42 ATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 328
BLAST of Vigun11g123500.1 vs. DB:Swiss
Match: SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 4.195e-71 Identity = 135/270 (50.00%), Postives = 177/270 (65.56%), Query Frame = 1 Query: 1 MGSASLVFAAVARRLEGKVALITGGASGIGESTARLLAKHGAKVVIADIQDELGHSVSKDI---DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHNNAGTIGAWNPSIMHNKKSDFEEVINVNLVGAFLGMKHAARVMAPFRRGSIIATASVSGRLGGVA-SHAYTCSKHGIVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSRNFLNTDD---EGIAALYSNLKGVTLKAQDVAEAVVYLASDESKYVSGHDLVVDGGFSVMNAGL 789 MGS S ++ RL+ KVA+ITGGA GIGE+TA+L ++GAKVVIADI D+ G V +I D +VHCDVTK+E V VDT +++ GKLDIM N G + SI+ DF+ V+++N+ GAFL KHAARVM P ++GSI+ TAS+S G SH YT +KH ++GL + ELG GIRVNCVSPY V +P+ + D E +A +NLKG L+A+DVA+AV YLA DESKYVSG +LV+DGG++ N Sbjct: 1 MGSTSTPDSS-TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF 269 The following BLAST results are available for this feature:
BLAST of Vigun11g123500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun11g123500.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123500.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123500.1; organism=Vigna unguiculata; type=mRNA; length=1155bpback to top protein sequence of Vigun11g123500.1_Vu_IT97K-499-35_v1.1 >Vigun11g123500.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123500.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=271bpback to top mRNA from alignment at Vu11:33089708..33090966- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun11g123500.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123500.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123500.1; organism=Vigna unguiculata; type=mRNA; length=1259bp; location=Sequence derived from: Vu11:33089708..33090966- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu11:33089708..33090966- >Vigun11g123500.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123500.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123500.1; organism=Vigna unguiculata; type=CDS; length=813bp; location=Sequence derived from: Vu11:33089708..33090966- (Vigna unguiculataback to top |