Vigun11g123700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 4.173e-108 Identity = 159/267 (59.55%), Postives = 199/267 (74.53%), Query Frame = 1 Query: 1 MGSFSQLSSAVARRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDD----EGIAALYSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNA 783 M + SQ+ +A+ARRLEGKVALITGGASGIGE TA+L ++HGA+V IAD+QDELGHSV + I +S Y+HCDVT E+ V+ AVD VS +GKLDIM SNAGI+ P I+ N+K+DFE V +VN+ GVFL MKHAARVM P+R G+II+TAS+ +GG +SHAY SKH V+GL RN AVELG GIRVNC+SP+ +PTA+ K F + E + NLKG EDVA A +YLASDE+KY+SGH+L +DGGFSV N+ Sbjct: 1 MAATSQVLTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNSTYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNVTGVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGLTRNLAVELGQFGIRVNCLSPFGLPTALGKKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALYLASDEAKYVSGHNLFIDGGFSVCNS 267
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.518e-90 Identity = 158/272 (58.09%), Postives = 194/272 (71.32%), Query Frame = 1 Query: 1 MGSFSQLSSAVARRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDDEGIAALY---SNLKGV-TLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNAGLCSF 798 M + S SA AR+L GKVA+ITGGASGIG CTARL KHGARVV+ADIQDELG S+ ++ D+S YVHCDVT E V AVD AV+RFGKLD+M +NAG++G + K DFE V+ VNLVG FLG KHAARVMAP+RRGSII+TAS+ + G ASHAYT SKH +VG NAA ELG GIRVNCVSP V T +++ + DDE I A+ +NLKG LK +D+A A ++LASD+ +Y+SG +L VDGG SV+N+ F Sbjct: 1 MAAGSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFF 272
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.032e-88 Identity = 142/265 (53.58%), Postives = 180/265 (67.92%), Query Frame = 1 Query: 40 RLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI---DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDDEGIAALY---------SNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNAGLCSF 798 RLEGKVAL+TGGASGIGE ARL +HGA++ I D+QDELG VS+ + + Y HCDVT E+ V RAVD ++G +DIM +NAGITG I ++F++V ++N+ GVFLGMKHAAR+M P +GSI++ ASV I G H YT +KH VVGL ++ A ELG GIRVNCVSPYAVPT +S +L + AL +NLKGV L P DVAEAV+YLA++ESKY+SG +LV+DGGFS+ N L F Sbjct: 2 RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVNCVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEESKYVSGLNLVIDGGFSIANHTLQVF 266
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.824e-82 Identity = 131/257 (50.97%), Postives = 183/257 (71.21%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDID-SSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGIT-GVWNP-SIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDDEGIAALYS---NLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNAGL 789 +RLEGKVA+ITGGASGIG CTA L ++GA+VVIADIQD+LG +++ + + Y+HCDV+KE+ V VDT V+++G+LDIM +NAGI G P S++ ++KSD + +++VNL G FLG KHA RVM R+G I+ T+S+C I G++ HAY SK GV GL +N ELG GIRVNC+SPY + T +S N + E + A+ S L G TL+ + +A+A ++LASDE+ Y+SG ++VVDGG+SV+N L Sbjct: 9 KRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSKEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNCISPYGLVTGIS-NISEANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRL 264
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 4.521e-81 Identity = 133/263 (50.57%), Postives = 183/263 (69.58%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDID-SSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGIT-GVWNP-SIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDDEG------IAALYS---NLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNAGL 789 +RLEGKVA+ITGGASGIG CTA L ++GA+VVIADIQD+LG +++ + + Y+HCDV+KE+ V VDT V+++G+LDIM +NAGI G P S++ ++KSD + +++VNL G FLG KHA RVM R+G I+ T+SVC I G++ HAY SK GV GL +N ELG GIRVNC+SPY + T +S N EG + A+ S L G TL+ + +A+A ++LASDE+ Y+SG ++VVDGG+SV+N L Sbjct: 9 KRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILFTSSVCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNCISPYGLVTGVS----NVSGEGEANREFVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYSVVNPRL 267
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=ABA2 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 2.481e-76 Identity = 133/263 (50.57%), Postives = 175/263 (66.54%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI------DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFL----NTDD-----EGIAALYSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMN 780 +RL GKVALITGGA+GIGE RL KHGA+V I D+QD+LG V K + +++ ++H DV E+ + AVD AV FG LDI+ +NAG+ G P I + S+FE +VN+ G FL MKHAARVM P ++GSI++ SV G +GG+ H+Y SKH V+GL R+ A ELG GIRVNCVSPYAV T ++ L T+D AA +NLKGV L +DVA AV++LASD+S+YISG +L++DGGF+ N Sbjct: 16 QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTN 278
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.529e-75 Identity = 130/266 (48.87%), Postives = 171/266 (64.29%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDIDSS------IYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVW--NPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAP-SRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDDEGIAAL------------YSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFS 771 +RLEGKVA+ITGGA GIG+ T L A+HGA VVIAD+ + G S++K + S ++ CDV+ E VE V+ V+R+G+LDI+ +NAG+ G + SI+ +F+ V+ VN+ GV LGMKH AR M +G II+TASV G +GGM HAYT SKH +VGL +NAA ELG GIRVNC+SP+ V T+M N G +NLKG TL+ D+AEA +YLASDESKY++GH+LVVDGG + Sbjct: 30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVVDGGVT 295
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 3.154e-71 Identity = 122/253 (48.22%), Postives = 164/253 (64.82%), Query Frame = 1 Query: 37 RRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI--DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSR-RGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDD---EGIAALYSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVM 777 +RL+GK+ +ITGGASGIG + RL +HGARVVI D+QDELG +V+ I D + Y HCDVT E VE AV V ++GKLD++ SNAG+ + SI+ ++ + I +NL G +KHAAR M RGSI+ T SV I G A H YT SKHG++GL+++A+ LG GIRVN V+P+ V T + N + E + +NLKG+ LK VAEA ++LASDES Y+SG +L VDGG+SV+ Sbjct: 4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPF-VSILDLNLNELDRTIAINLRGTAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQNLAVDGGYSVV 255
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 2.296e-69 Identity = 132/286 (46.15%), Postives = 179/286 (62.59%), Query Frame = 1 Query: 13 SQLSSAVARRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDIDSSI-YVHCDVTKEEHVERAVDTAVSRFG-KLDIMHSNAGITGVWNP---SIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNT----------------------DDEGIAAL------YSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFS 771 + + + + +RL+GKVA++TGGA GIGE RL AKHGARVVIADI D G +++ + + +V CDV+ E+ V RAVD A+SR G +LD+ +NAG+ G SI+ ++F+ V+ VN +G LGMKHAAR MAP R GSI++ ASV +GG+ HAYT SKH +VGL +NAA EL G+RVNCVSP+ V T M N D+ + + + LKG TL+P D+AEAV++LASDE++YISGH+LVVDGG + Sbjct: 43 TAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 328
BLAST of Vigun11g123700.1 vs. DB:Swiss
Match: SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.475e-69 Identity = 132/270 (48.89%), Postives = 173/270 (64.07%), Query Frame = 1 Query: 1 MGSFSQLSSAVARRLEGKVALITGGASGIGECTARLLAKHGARVVIADIQDELGHSVSKDI---DSSIYVHCDVTKEEHVERAVDTAVSRFGKLDIMHSNAGITGVWNPSIMHNKKSDFEEVINVNLVGVFLGMKHAARVMAPSRRGSIIATASVCGRIGGMA-SHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTAMSKNFLNTDD---EGIAALYSNLKGVTLKPEDVAEAVVYLASDESKYISGHDLVVDGGFSVMNAGL 789 MGS S S+ RL+ KVA+ITGGA GIGE TA+L ++GA+VVIADI D+ G V +I D +VHCDVTK+E V VDT +++ GKLDIM N G+ SI+ DF+ V+++N+ G FL KHAARVM P+++GSI+ TAS+ G SH YT +KH V+GL + ELG GIRVNCVSPY V + + + D E +A +NLKG L+ EDVA+AV YLA DESKY+SG +LV+DGG++ N Sbjct: 1 MGSTSTPDSS-TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF 269 The following BLAST results are available for this feature:
BLAST of Vigun11g123700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun11g123700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123700.1; organism=Vigna unguiculata; type=mRNA; length=1267bpback to top protein sequence of Vigun11g123700.1_Vu_IT97K-499-35_v1.1 >Vigun11g123700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=271bpback to top mRNA from alignment at Vu11:33104050..33105430- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun11g123700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123700.1; organism=Vigna unguiculata; type=mRNA; length=1381bp; location=Sequence derived from: Vu11:33104050..33105430- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu11:33104050..33105430- >Vigun11g123700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g123700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g123700.1; organism=Vigna unguiculata; type=CDS; length=813bp; location=Sequence derived from: Vu11:33104050..33105430- (Vigna unguiculataback to top |