Vigun11g125100.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD5_MOUSE (OTU domain-containing protein 5 OS=Mus musculus OX=10090 GN=Otud5 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 1.467e-63 Identity = 105/243 (43.21%), Postives = 156/243 (64.20%), Query Frame = 1 Query: 589 GYNSADEQKPCL--VSSYDDFERERQ---FEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSSTFKQQL 1302 GYNS DE + + + D E+Q FE +R KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y YS EPIN FHG + + PIR+SYH HYNS+V+P + TIG GLG S + ++ +K AIK+ ++ I +L + + +D E T + IE V S ++L D +Q+ Sbjct: 174 GYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQV 416
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD5_RAT (OTU domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Otud5 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 1.498e-63 Identity = 105/243 (43.21%), Postives = 156/243 (64.20%), Query Frame = 1 Query: 589 GYNSADEQKPCL--VSSYDDFERERQ---FEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSSTFKQQL 1302 GYNS DE + + + D E+Q FE +R KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y YS EPIN FHG + + PIR+SYH HYNS+V+P + TIG GLG S + ++ +K AIK+ ++ I +L + + +D E T + IE V S ++L D +Q+ Sbjct: 174 GYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQV 416
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTU5A_DANRE (OTU domain-containing protein 5-A OS=Danio rerio OX=7955 GN=otud5a PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 8.854e-63 Identity = 104/237 (43.88%), Postives = 152/237 (64.14%), Query Frame = 1 Query: 580 ESEGYNSADE-QKPCLVSSYDDFERERQ---FEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSD 1278 E GYNS DE + + S D E+Q FE ++ KG+ +KKM EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y EPIN FHG + + PIR+SYH HYNS+V+P + TIG GLG + + D+ +K AIK+ ++ I +L + + +D E T + IE V S ++L D Sbjct: 170 EGAGYNSEDEYENASRLQSEDPATVEQQEHWFEKALQEKKGFVIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPAFKPGFADQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRD 406
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD5_HUMAN (OTU domain-containing protein 5 OS=Homo sapiens OX=9606 GN=OTUD5 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.085e-61 Identity = 105/248 (42.34%), Postives = 157/248 (63.31%), Query Frame = 1 Query: 589 GYNSADEQKPCL--VSSYDDFERERQ---FEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYS-----IEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSDSSTFKQQL 1302 GYNS DE + + + D E+Q FE +R KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y YS +EPIN FHG + + PIR+SYH HYNS+V+P + TIG GLG S + ++ +K AIK+ ++ I +L + + +D E T + IE V S ++L D +Q+ Sbjct: 174 GYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQV 421
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTU5B_XENLA (OTU domain-containing protein 5-B OS=Xenopus laevis OX=8355 GN=otud5-b PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.663e-61 Identity = 99/234 (42.31%), Postives = 151/234 (64.53%), Query Frame = 1 Query: 589 GYNSADEQKPCLVSSYDDF----ERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSD 1278 G NS DE + + + D ++E FE + KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y Y EPIN FHG + PIR+SYH HYNS+V+P + TIG GLG S + + ++ +K+AI++ ++ I +L + + +D E T + IE V S ++L D Sbjct: 133 GNNSEDEYETAAQTQHLDPDTAQQQEHWFEKALCEKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGHAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRD 366
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD5_XENTR (OTU domain-containing protein 5 OS=Xenopus tropicalis OX=8364 GN=otud5 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.105e-61 Identity = 93/211 (44.08%), Postives = 142/211 (67.30%), Query Frame = 1 Query: 646 ERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSD 1278 ++E FE ++ KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y Y EPIN FHG + PIR+SYH HYNS+V+P + TIG GLG S + ++ +K+AI++ ++ I +L + + +D E T + IE V S ++L D Sbjct: 156 QQEHWFEKALQEKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRD 366
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTU5A_XENLA (OTU domain-containing protein 5-A OS=Xenopus laevis OX=8355 GN=otud5-a PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.158e-60 Identity = 99/234 (42.31%), Postives = 149/234 (63.68%), Query Frame = 1 Query: 589 GYNSADEQKPCLVSSYDDFERERQ----FEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKSQQDEQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLSD 1278 G NS DE + + + D + Q FE + KG+ +K+M EDG CLFRAVADQVYGD +++++VR+ C+DY+ + D+FS ++TE FT+Y RKR++ +GN++E+QAM EMYNRP+ +Y Y EPIN FHG + PIR+SYH HYNS+V+P + TIG GLG S + ++ +K+AI++ ++ I +L + + +D E T + IE V S ++L D Sbjct: 128 GNNSEDEYETAAQTQHLDPDTAEQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQKNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGYAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRD 361
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD4_MOUSE (OTU domain-containing protein 4 OS=Mus musculus OX=10090 GN=Otud4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.655e-12 Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 679 RAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSIEP-INIFHGSYNTDTPPIRLSYHHGNHYN 1047 R G K + +DG+CLFRAVA+QV + VR CI Y+ + R+ F FI F Y KR + + VEI A+ MY + IY EP ++ H + N + L + +GNHY+ Sbjct: 30 RKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQ---EPNVSPSHVTENNFPEKVLLCFSNGNHYD 150
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD4_HUMAN (OTU domain-containing protein 4 OS=Homo sapiens OX=9606 GN=OTUD4 PE=1 SV=4) HSP 1 Score: 71.633 bits (174), Expect = 1.056e-11 Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 679 RAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIY-SYSIEPINIFHGSYNTDTPPIRLSYHHGNHYN 1047 R G K + +DG+CLFRAVA+QV + VR CI Y+ + R+ F FI F Y KR + + VEI A+ MY + IY ++ P + ++ + L + +GNHY+ Sbjct: 30 RKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEK---VLLCFSNGNHYD 150
BLAST of Vigun11g125100.1 vs. DB:Swiss
Match: OTUD1_MOUSE (OTU domain-containing protein 1 OS=Mus musculus OX=10090 GN=Otud1 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.942e-11 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 580 ESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIY------SYSIEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVD 1059 E+ G + AD + L + ER+ ++ +R+ Y ++ DGNCL+RAV+ VYGD L+ +R+ + Y+ DHFS I + +D + E+ AM +M N IH+ S ++ + + G ++ P I LS+ HY+++ D Sbjct: 249 EAVGTSRADPRDEKLALYLAEVERQDKY---LRQRNKYRFH-IIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVFD 410 The following BLAST results are available for this feature:
BLAST of Vigun11g125100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun11g125100.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125100.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125100.1; organism=Vigna unguiculata; type=mRNA; length=2264bpback to top protein sequence of Vigun11g125100.1_Vu_IT97K-499-35_v1.1 >Vigun11g125100.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125100.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=522bpback to top mRNA from alignment at Vu11:33249145..33255048- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun11g125100.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125100.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125100.1; organism=Vigna unguiculata; type=mRNA; length=5904bp; location=Sequence derived from: Vu11:33249145..33255048- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu11:33249145..33255048- >Vigun11g125100.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125100.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125100.1; organism=Vigna unguiculata; type=CDS; length=1566bp; location=Sequence derived from: Vu11:33249145..33255048- (Vigna unguiculataback to top |