Vigun11g126800.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 4.768e-119 Identity = 226/402 (56.22%), Postives = 275/402 (68.41%), Query Frame = 1 Query: 19 QHQGKNIHSSSRMPIPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQE-IQNGGMSLRPFNVHTFMERKEVIEGPNLNNLPSTDLKWCDPVK-NTFLTPL----------SRRSPSNLSMSIGLEGETENGSTIRKESVKPVAEKVSQDYGLPSFFAAPKLDLATEDKN-TRTSCKELDLNGFSWN 1185 QHQGKNI SSSRM I SERH FL GN GDSGL+LSTDAKPRLKWTPDLH RFIEAV QLGGADKATPKT+MK+MGI GLTLYHLKSHLQKYRLSK+L+GQ+NN +KI I +E+ + + NL++ PQ NK+ I EALQMQIEVQRRL+EQLEVQR LQLRIEAQGKYLQ+VLEKAQETLGRQNLG G+EAAK+QLS+LVSKVS++ NS+FLE KELQ Q QTN P DCS++SCLTS E +QK + ++N + LR + + E+KE++E P + +L W + ++ N +L+ + S RSP LS+ +GL G E K + G+ S +LDL T +N T K+ DLNGFSWN Sbjct: 6 QHQGKNILSSSRMHITSERHPFLR-GNSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIM--TMMEEKTPDADEIQSENLSIGPQP-NKNSPIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRM---ELTWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLHGHKSQHQQGNNEDHKL---ETRNRKGMDS---TTELDLNTHVENYCTTRTKQFDLNGFSWN 394
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHLA_ARATH (Myb-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYR1 PE=1 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.503e-114 Identity = 222/415 (53.49%), Postives = 280/415 (67.47%), Query Frame = 1 Query: 1 MYSPHLQHQGKNIHSSSRMPIPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQEIQNGGMSLRPFNVHTFMERKEVIEGPNLNNLPSTDLKWCD----------PVKNTFLTPL------SRRSPSNLSMSIGL---EGETENGSTIRKESVKPVAEKVSQDYGLPSFFAAPKLDLATEDKNTRTS-CKELDLNGFSWN 1185 MY H QHQGK+I SSSRMPI SERH FL GNG+GDSGL+LSTDAKPRLKWTPDLH RF+EAV QLGG DKATPKT+MK+MGI GLTLYHLKSHLQKYRLSK+L+GQ+N+ +K S+ +E E + +H +L++ PQ + +L IS+ALQMQIEVQRRL+EQLEVQR LQLRIEAQGKYLQ++LEKAQETLGRQNLG G+EA K QLS+LVSKVS+ +S+FLE KELQ Q Q P + S+DSCLTS E +QK ++ + + LR + + E+KE++E P + + +L W + P +T + SRRSP LS+ +GL G + N S +E + ++D L + LDL T D+N T+ K+ DLNGFSWN Sbjct: 1 MYY-HNQHQGKSILSSSRMPISSERHPFLR-GNGTGDSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSV--MTMVEENPPEVDESHSESLSIGPQP-SMNLPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPFFHRM---ELTWAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVGLHEHRGRSSNNSEYTEERFN----ENNEDCKLET-HTRTALDLNTHDENYGTTRPKQFDLNGFSWN 402
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.412e-48 Identity = 112/233 (48.07%), Postives = 150/233 (64.38%), Query Frame = 1 Query: 109 DSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVS----SQCLNSAFLELKEL-QGFSPHQTQTNQPNDCSMDSCLTSCEV 792 D+ LVL+TD KPRL+WT +LH RF++AV QLGG DKATPKT+M+ MG+ GLTLYHLKSHLQK+RL + +S + + +S + ++ + ++L LA Q N+ ++EAL+ Q+EVQRRL+EQLEVQR LQLRIEAQGKYLQ++LEKA + + Q + GLEAA+ +LS+L K S Q S F K + S N+CS +S LTS V Sbjct: 27 DACLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAES------QDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSSTV 253
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHL8_ARATH (Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.713e-47 Identity = 106/208 (50.96%), Postives = 146/208 (70.19%), Query Frame = 1 Query: 97 NGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNN---KDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKEL 711 N LVLSTDAKPRLKWT DLH +FIEAV QLGG +KATPK +MK+M I GLTLYHLKSHLQKYRL KS+ N K+ ++ + E +N+ + ++ +++N + L I+EALQMQ+EVQ++L+EQ+EVQR LQ++IEAQGKYLQ+VL KAQ+TL + +G++ A+ +LS L S V+ C +++F EL ++ Sbjct: 20 NHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRLGKSMKFDDN----KLEVSSASENQEVESKNDSRDLRGCSVTEENSNPAKEGLQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTELSRLASMVNRGCPSTSFSELTQV 223
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.561e-46 Identity = 113/251 (45.02%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 61 IPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKV--SSQCLNSAFLELKELQGFSPHQTQ--------TNQPNDCSMDSCLTS 783 + + H L N GD+ LVL+TD KPRL+WT +LH RF++AV QLGG DKATPKT+M+ MG+ GLTLYHLKSHLQK+RL + G+ + K + G + D + +++ +A Q N+ ++EAL+ Q+EVQRRL++QLEVQR LQLRIEAQGKYLQ++LEKA + Q GLEAA+ +LS+L KV SSQ + + + ++ P ++ N +CS++S LTS Sbjct: 15 VGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQA-GKESTENSKDASCVGESQD-----TGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMM-MMPSLSELAVAIDNKNNITTNCSVESSLTS 258
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.631e-37 Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 106 GDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNL 609 GDSGLVL+TD KPRL+WT +LH RF++AV QLGG DKATPKT+M++MG+ GLTLYHLKSHLQK+RL K H + + + K A +R N+A S +++E MQ+EVQRRL+EQLEVQR LQLRIEAQGKY+Q++LE+A +TL +N+ Sbjct: 23 GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQR------------NVASSSGMMSRNMNE---MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENM 175
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHLB_ARATH (Myb family transcription factor PHL11 OS=Arabidopsis thaliana OX=3702 GN=PHL11 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 6.649e-36 Identity = 93/197 (47.21%), Postives = 125/197 (63.45%), Query Frame = 1 Query: 94 GNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNK--DLH--------ISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDL 654 G G + G++++ D KPRL+WT DLH RF++AV +LGGADKATPK+V+KLMG+ GLTLYHLKSHLQKYRL + G+ N T + N G++ H +N + SN+ D H +EA++ Q++ Q+R EQLEVQ+ LQ+R+EAQGKYL +LEKAQ++L N G E K Q SD Sbjct: 8 GLGYDNGGVMMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYRLGQQ-QGKKQNRTEQNKENAGSSY---------VHFDNCSQGGISNDSRFDNHQRQSGNVPFAEAMRHQVDAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQKSLPCGNAG----ETDKGQFSDF 190
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHLC_ARATH (Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.427e-34 Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 1 Query: 112 SGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISI-NPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQET 591 SGLVL+TD KPRL+WT +LH RF++AV LGG +KATPKT+M++MG+ GLTLYHLKSHLQK+RL K H + + H I I + A+ LR N + L + N +MQ+EVQRR+ E++ ++R + RI AQGKY++++LEKA ET Sbjct: 14 SGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEHSQ-NHSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMN----------EMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACET 163
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHL7_ARATH (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.422e-29 Identity = 77/154 (50.00%), Postives = 109/154 (70.78%), Query Frame = 1 Query: 136 AKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQETLG 597 +K RL+WT +LH RF++AV QLGG D+ATPK V+++MG+ GLT+YH+KSHLQKYRL+K L S+ G TD ++ +G ++ L+ + + I+EAL++Q+EVQ+RL+EQLEVQR LQLRIEAQGKYL+ ++E+ Q G Sbjct: 14 SKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSE---------GKKTD---KKESGDMLSGLD-----GSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSG 150
BLAST of Vigun11g126800.1 vs. DB:Swiss
Match: PHR3_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.764e-25 Identity = 75/150 (50.00%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 139 KPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNVTHKISINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVXXXXXXXXXXXXXXXXXIEAQGKYLQAVLEKAQE 588 KPRL+WTP+LH RF++AV +L G +KATPK V+KLM + GLT+YH+KSHLQKYRL+K L P D++ E V N N + K ++EAL+MQ+EVQ++L+EQLEVQR LQLRIE +YLQ +LE+ Q+ Sbjct: 265 KPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYL--------------PETKEDKKQEEKKTKSVANGN--DHAKKKSAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQK 398 The following BLAST results are available for this feature:
BLAST of Vigun11g126800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun11g126800.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g126800.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g126800.1; organism=Vigna unguiculata; type=mRNA; length=1746bpback to top protein sequence of Vigun11g126800.1_Vu_IT97K-499-35_v1.1 >Vigun11g126800.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g126800.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g126800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=396bpback to top mRNA from alignment at Vu11:33386967..33389554- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun11g126800.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g126800.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g126800.1; organism=Vigna unguiculata; type=mRNA; length=2588bp; location=Sequence derived from: Vu11:33386967..33389554- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu11:33386967..33389554- >Vigun11g126800.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g126800.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g126800.1; organism=Vigna unguiculata; type=CDS; length=1188bp; location=Sequence derived from: Vu11:33386967..33389554- (Vigna unguiculataback to top |