Vigun11g178000.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZP11_ARATH (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.287e-46 Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 73 QAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVLNA---------GFGSTTFVEPSTNSTTTFFNPMNMGY-LNHPIMASADILQY 465 +++M+QRKRKRM+SNRESARRSRM+KQK LDDL QV L+KEN +I+T+V+ITTQ +L+VEAENSVLRAQ+ EL+HRL+SLN+II+ L++ G S V F N MNM Y +N P+MAS+D L Y Sbjct: 21 ESLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNMGMCSNPLV--GLECDDFFVNQMNMSYIMNQPLMASSDALMY 159
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZP44_ARATH (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.065e-44 Identity = 77/136 (56.62%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 61 EEDLQA--VMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVL---NAGFGSTTFVEPSTNST-TTFFNPMNMGYLNHPIMASA 450 E DL+ ++D+RKRKR SNRESARRSRMRKQKHLDDL QV LRKEN QI+ + +TTQ ++++EAEN +LRAQV EL+HRL+SLNEI+D + ++GFG T NPMN+G+ N PIMASA Sbjct: 29 ESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVESSSSGFGMETGQGLFDGGLFDGVMNPMNLGFYNQPIMASA 164
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.568e-37 Identity = 71/145 (48.97%), Postives = 96/145 (66.21%), Query Frame = 1 Query: 82 MDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVL---NAGFG----STTFVEPSTNSTTTFFNPMNMG----------YLNHPIMASADILQY 465 +D+RKRKRM+SNRESARRSRMRKQKH+DDL Q+ QL +N+QIL ++ +T+Q ++ ++AENSVL AQ+ ELS RL+SLNEI+D++ AGFG + T +++ MNM Y N PIMA+ DI Y Sbjct: 28 VDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGVDQIDGCGFDDRTVGIDGYYDDMNMMSNVNHWGGSVYTNQPIMAN-DINMY 171
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.661e-29 Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 79 VMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVLNAGFGSTTFVEPSTNSTTTFFNPMNMGYLNHPIMASADIL 459 V D+RKRKRMISNRESARRSRMRKQK L DL+ +V L+ +N +I V+ +++++ +E++N+VLRAQ EL+ RL SLN +++++ G + + NP M PI ASAD+ Sbjct: 21 VTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDI---PEIPESMQNPWQMPCPMQPIRASADMF 144
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.233e-22 Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 88 QRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVLNAGFGSTTFVEPSTNSTTTFFNPMNMGYLNHPI-MASADILQY 465 R+ KR +SNRESARRSR+RKQ+HLD+LV +VA+L+ +N ++ Q+ VE EN+VLRA+ EL RL S+NE++ ++ G ++ + P + Y + M + +L Y Sbjct: 25 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNARVAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEVLRLVEEFSGVAMDIQEEMPADDPLLRPWQLPYPAAAMPMGAPHMLHY 151
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: RSBZ3_ORYSJ (bZIP transcription factor RISBZ3 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.116e-15 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 82 MDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEII--DVLNAGFGSTTFVEPSTN 384 +D ++ +RM+SNRESARRSR RKQ HL DL TQV QLR EN + + QQF + +N +L++ V L +++ +++ L+ G G + P+ N Sbjct: 140 LDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTDNRILKSDVEALRVKVKMAEDMVARGALSCGLGHLGGLSPALN 242
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.816e-15 Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 61 EEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGEL 297 EE+ + ++++RK+KR ISNRESARRSRMRKQ+ +D+L +QV LR EN Q+L +N + V EN L+ + EL Sbjct: 62 EENHKEIINERKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTEL 140
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: RSBZ4_ORYSJ (bZIP transcription factor RISBZ4 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ4 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.102e-15 Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 82 MDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEII--DVLNAGFGSTTFVEPSTN 384 +D ++ +RM+SNRESARRSR RKQ HL DL +QV QLR EN + + QQF + +N +L++ V L +++ +++ L+ G G + P+ N Sbjct: 121 LDVKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFKQLTDANQQFTTSVTDNRILKSDVEALRVKVKMAEDMVARGALSCGLGHLGGLSPALN 223
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZIP1_ARATH (Basic leucine zipper 1 OS=Arabidopsis thaliana OX=3702 GN=BZIP1 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.031e-10 Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 82 MDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLR---KENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEII 330 +D++KRKR +SNRESARRSR++KQK ++D + +++ L KEN + V Q+ SVE EN+ LR++ LS + L +I Sbjct: 13 IDEKKRKRKLSNRESARRSRLKKQKLMEDTIHEISSLERRIKENSERCRAVK---QRLDSVETENAGLRSEKIWLSSYVSDLENMI 95
BLAST of Vigun11g178000.1 vs. DB:Swiss
Match: BZIP8_ARATH (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.675e-10 Identity = 29/78 (37.18%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 85 DQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQF-------LSVEAENSVLRAQVGEL 297 ++RKR+R +SNRESARRSRMRKQ+H+++L + + QL +N+ ++ ++ + + + + ENS R +GE+ Sbjct: 45 NERKRRRKVSNRESARRSRMRKQRHMEELWSMLVQLINKNKSLVDELSQARECYEKVIEENMKLREENSKSRKMIGEI 122 The following BLAST results are available for this feature:
BLAST of Vigun11g178000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun11g178000.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g178000.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g178000.1; organism=Vigna unguiculata; type=mRNA; length=826bpback to top protein sequence of Vigun11g178000.1_Vu_IT97K-499-35_v1.1 >Vigun11g178000.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g178000.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g178000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=156bpback to top mRNA from alignment at Vu11:38224211..38225036+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun11g178000.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g178000.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g178000.1; organism=Vigna unguiculata; type=mRNA; length=826bp; location=Sequence derived from: Vu11:38224211..38225036+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu11:38224211..38225036+ >Vigun11g178000.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g178000.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g178000.1; organism=Vigna unguiculata; type=CDS; length=468bp; location=Sequence derived from: Vu11:38224211..38225036+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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