Phvul.001G218400.3
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 456.447 bits (1173), Expect = 1.270e-156 Identity = 220/411 (53.53%), Postives = 285/411 (69.34%), Query Frame = 1 Query: 112 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSS---NYPWNCSYVKGYSDLVLPEACEPLKERIFPEHCSDCYY 1335 R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VP G+WLTGSF L SH TL+L +DAV+L S + WPV+ PLPSYGRGR+ R+ SLI+G NL+DVIITG+NGTIDGQG +WW F L YTRP+LIELM S + ISNLT LNSP W +HPVY ++ +Q +TI AP+ SPNTDGI+PDS N IEDCYI +GDD +A+KSGWDEYGI YG P ++I RL + SA IA+GSEMSGG+ +V EDI +S + IRIKT GRGGYV++IYV +T+ + A TG YG H D+ YDPKA PVI+ I +D+V EN+ A +EGI D F +C+SN+ +++++ PW C+ V+G S V P C L ++ PE S C + Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQ-GPEKTSLCNF 468
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.393e-34 Identity = 126/434 (29.03%), Postives = 187/434 (43.09%), Query Frame = 1 Query: 127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGS---FDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS----MFRNKTL--DYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGYSDLVLPEACEPLKERIFPEHCSDCYYLSNQIQSSKSQNRG 1377 ++ ++GAVGDG +T+AF N+ K A L VP + + F L D I+ +P W K K + L+D + G G IDGQG WW+ + +T+ D RP I++ S V + LT +NSP + L C V +Q + I AP DSPNTDGID +S IE C I TGDD IAI +G +NI I L+ GI+IGS VS VH+ +F D+ +RIKT G G I NV + N + I Y + ++ I+ +T K++ G + TA I+ + D+ + LSN+ L ++S P +C +G+ L C+ L+ P+ + L Q + +N+G Sbjct: 60 NVEQYGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHLSFKVDGTIVAQPDPARW-----------------KNSKIWLQFAQLTDFNLMGT-GVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLI--CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTS-ATAAAIQLMCSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIPTCKNLRPGPSPKE----FELQQQPTTVMDENKG 454
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.212e-30 Identity = 110/353 (31.16%), Postives = 171/353 (48.44%), Query Frame = 1 Query: 118 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGS--TNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGG----VSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLY-GEHPDDAYDPKALPV-IEKITIKDVVGENIKTAGL 1152 +++ +T+FGAVGDGVT +++AF A + + G + VP G +T L + GS + P ++ L + +G G + + +++ ++ ++I G+ G I+GQGS WW +RP ++ + + +S LT L+SP +H C++VT+ + I AP SPNTDGID +S NV I+DC I+TGDD IAI SG +NI I + GI+IGS G V V +++ F + RIKT G GY R I +TL NV+ I Y G D+A D K+ V + K+ + +G + G+ Sbjct: 22 NALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG------------MTFML-QPLKFQGSCKSTPVFVQMLGKLVAPSKG-NWKGDKDQWILF-TDIEGLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGV 337
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.559e-30 Identity = 119/411 (28.95%), Postives = 178/411 (43.31%), Query Frame = 1 Query: 127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLW--------LDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS----MFRNKTL--DYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGG----VSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGYSDLVLPEACEPL 1293 ++ +GAVGDG +T AF+ N+ +K A VP + ++++L + D I +P W K K ++ L+D + G G IDGQG+ WWS +T+ D RP I++ S V + LT NSP + L C V +Q + I AP DSPNTDGID +S IE C I TGDD +A+ +G +NI I L G++IGS G VS VH++ +F D+ +RIKT G G +I NV + N + I Y + ++ I+ +T K++ G + TA I+ + D+ N+ LSN+ L ++S C GY L +C+ L Sbjct: 61 NVEHYGAVGDGKHDSTDAFEKT---WNAACNKLSAVFLVPANKKF-----VVNNLVFYGPCQPHFSFKVDGTIAAYPDPAKW-----------------KNSKIWMHFARLTDFNLMGT-GVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLT--CGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAA-IQLMCSDSVPCSNIKLSNVFLKLTSGKVATCVNKNANGYYTNPLNPSCKSL 431
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.030e-28 Identity = 119/407 (29.24%), Postives = 177/407 (43.49%), Query Frame = 1 Query: 127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGS---FDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS------MFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGY-SDLVLPEACEPL 1293 ++ ++GAVGDG T+AF A + K A L VP + + F+ D +I NP W K ++ + L+ + G G IDGQG WW+ R D RP I+ STG++I L +NSP + L C V + ++I AP DSPNTDGID +S N ++ I TGDD +AI +G +NI+I L+ GI+IGS VS VH+ +F D+ +RIKT G G +I NV + N + I Y + ++ I+ +T K++ G + TA I+ D+ ++ LS+I L ++S +C GY S V+P AC+ L Sbjct: 60 NVEKYGAVGDGKHDCTEAFSTA---WQAACKKPSAMLLVPGNKKFVVNNLFFNGPCQPHFTFKVDGIIAAYQNPASW-----------------KNNRIWLQFAKLTGFTLMGK-GVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLI--CGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTS-ATAAAIQLKCSDSMPCKDIKLSDISLKLTSGKIASCLNDNANGYFSGHVIP-ACKNL 430
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_PECPM (Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.800e-23 Identity = 104/346 (30.06%), Postives = 158/346 (45.66%), Query Frame = 1 Query: 256 WLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSI--------WWSMFRN---KTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSH--VTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCT-NI-IIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYPWNCSYV 1248 +L+G L S ++L +DK + N + + + PS + GK + I + ++ I G GTIDGQG + WW + + K L P LI++ S + N++ +NSP H V+ T K TI P + NTDGIDP SS N+ I I+TGDD +AIK+ GR T NI I+H G T G++IGSE + GV V ++D++ + +RIK+ G V + +NV + NV I +Y + + +P IT KDV E K ++ G + V + N+ L +S+ W V Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA-------YKGRAETRNISILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDVTSE-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNV 398
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.785e-23 Identity = 103/346 (29.77%), Postives = 157/346 (45.38%), Query Frame = 1 Query: 256 WLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSI--------WWSMFRN---KTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSH--VTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCT-NI-IIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYPWNCSYV 1248 +L+G L S ++L +DK + N + + + PS + GK + I + ++ I G GTIDGQG + WW + + K L P LI++ S + N++ +NSP H V+ T K TI P + NTDGIDP SS N+ I ISTGDD +AIK+ GR T NI I+H G T G++IGSE + GV V ++D+ + +RIK+ G V + +NV + NV I +Y + + +P IT KD+ + K ++ G + V + N+ L +S+ W V Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDTNGKGCDAFITATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA-------YKGRSETRNISILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDITSQ-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNV 398
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.645e-22 Identity = 111/383 (28.98%), Postives = 162/383 (42.30%), Query Frame = 1 Query: 115 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYG--RNLSDVIITGNNGTIDGQGSIWW--SMFRNKTLDYTR-PHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEK--ITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYP 1230 P +VS+++FGA GDG T +T+AF NA + + + G L VP G +L K + G N + S + R K +++ NLS + G+ G +DG G WW S RNK T+ P + NS +++ NL N+ + CS+V V V + AP DSPNTDGI ++ N+ + + I TGDD I+I+SG N+ I+ + GI+IGS VS V ++ + + +RIKT G G NI N+ + NV I D Y K+ EK + +K+VV +I E I N S NYP Sbjct: 65 PTTVSVSDFGAKGDGKTDDTQAFVNA--WKKACSSNGAVNLLVPKGN-------------TYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLS--VDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDIT--CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIII--------DQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENA------------ITFNCSKNYP 397
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.246e-22 Identity = 107/383 (27.94%), Postives = 167/383 (43.60%), Query Frame = 1 Query: 109 VRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNP-EDWPVVDPLPSYGRGRELPGKRHKSLIYG-RNLSDVIITGNNGTIDGQGSIWW--SMFRNKTLDYTR-PHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYP 1230 + +VS++ FGA GDG T +T+AF+ A + + + G VP G+ +L K G ++ ++ L + + + K H ++ NLS I G+ G I+G G WW S +K+ T+ P + L N + + NL N+ + C+ V V V I AP DSPNTDGI ++ N+ + + I TGDD I+I+ G N+ I L GI+IGS VS ++++ +F +S +RIKT G G +NI N+ + NV I Y + D D ++ + +K+VV +N I G + +V I LN S YP Sbjct: 63 LEASTVSVSNFGAKGDGKTDDTQAFKKA--WKKACSTNGVTTFLVPKGK-------------TYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLS--IDGGSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQ-----------NLQIFDLT--CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDK-DKCEDQESA-----VQVKNVVYKN---------ISGTSATDVA---ITLNCSEKYP 397
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.889e-21 Identity = 76/228 (33.33%), Postives = 106/228 (46.49%), Query Frame = 1 Query: 541 IELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKS------GWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKT-SPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPD-DAYDP-----------KALPVIEKITIKDVVGENIK-TAGLIEGI 1164 + L++ + T N+ WT+HP C +T TI AP DSPNTDG +P+S NV I S GDD IA+K+ G D++ T I R G+ IGSEMSGGV +V +ED + +R+KT + GG V NI + V L V A+ Y H D D +D P ++ IT++DV N+ AG+ G+ Sbjct: 25 LHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE-----TRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHY--HCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGL 245 The following BLAST results are available for this feature:
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.001G218400.3_Pv_G19833_v2.1 >Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=465bpback to top mRNA from alignment at Chr01:47398501..47402342+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3; organism=Phaseolus vulgaris; type=mRNA; length=3842bp; location=Sequence derived from: Chr01:47398501..47402342+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr01:47398501..47402342+ >Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3; organism=Phaseolus vulgaris; type=CDS; length=1395bp; location=Sequence derived from: Chr01:47398501..47402342+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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