Phvul.001G218400.3

Transcript Overview
NamePhvul.001G218400.3
Unique NamePhvul.001G218400.3_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01supercontigChr01:47398501..47402342 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR030Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL202Pisum sativum Cameor genome v1aPisum sativum
pvvuR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR036Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR056Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvL591Pisum sativum Cameor genome v1aPisum sativum
caipvL0234Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0366Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL225Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL339Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL193Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL313Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL908Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL674Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0483Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0876Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0463Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0689Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0747Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0759Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0915Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0916Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1259Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL008Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL391Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL496Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR019Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR020Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR028Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR061Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR032Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR058Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR078Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR036Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR039Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR051Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR054Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR022Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR065Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR039Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR042Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR048Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR057Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR071Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR078Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR085Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL280Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL643Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL225Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL356Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL379Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL460Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL462Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL176Cicer arietinum
carpvL290Cicer arietinum
carpvL650Cicer arietinum
ccapvL246Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL348Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL350Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR005Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR012Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR022Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR063Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR001Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR008Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR070Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR095Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR007Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR006Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR048Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR051Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR036Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR076Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR087Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR072Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR079Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR017Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR039Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR032Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.04G381900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.08G146500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_05618.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun01g202700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat06G0432600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_05333Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g131300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014639324.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg31239.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat3g016600.1Pisum sativum Cameor genome v1aPisum sativum
Va03G079630.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.5g134840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_003895Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.08G189600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_010990Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr01.1926.2.62113178Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va02G050170.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_22568Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_04G02809.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat03G0080600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g131300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_16996Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_08G01512.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan03g272400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg2870.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_03803.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.04G250300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058914354.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.3g094720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun01g202700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Hedin2.R1.5g170520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058882437.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_01049Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr07.1493Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_07177.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.1381Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr07.1001328Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.007G209200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.001G218400Phvul.001G218400_Pv_G19833_v2.1Phaseolus vulgarisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.001G218400.3.v2.1.five_prime_UTR.1Phvul.001G218400.3.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.001G218400.3.v2.1.CDS.1Phvul.001G218400.3.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.2Phvul.001G218400.3.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.3Phvul.001G218400.3.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.4Phvul.001G218400.3.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.5Phvul.001G218400.3.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.6Phvul.001G218400.3.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.001G218400.3.v2.1.CDS.7Phvul.001G218400.3.v2.1.CDS.7_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.001G218400.3.v2.1.three_prime_UTR.1Phvul.001G218400.3.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.001G218400.3Phvul.001G218400.3_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.001G218400.3_Pv_G19833_v2.1Phvul.001G218400.3_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


Homology
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 456.447 bits (1173), Expect = 1.270e-156
Identity = 220/411 (53.53%), Postives = 285/411 (69.34%), Query Frame = 1
Query:  112 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSS---NYPWNCSYVKGYSDLVLPEACEPLKERIFPEHCSDCYY 1335
            R HS S+ +FG VGDG TLNTKAFQ+A+  L+ +  +GGA+L+VP G+WLTGSF L SH TL+L +DAV+L S +   WPV+ PLPSYGRGR+    R+ SLI+G NL+DVIITG+NGTIDGQG +WW  F    L YTRP+LIELM S  + ISNLT LNSP W +HPVY  ++ +Q +TI AP+ SPNTDGI+PDS  N  IEDCYI +GDD +A+KSGWDEYGI YG P   ++I RL   +  SA IA+GSEMSGG+ +V  EDI   +S + IRIKT  GRGGYV++IYV  +T+  +  A   TG YG H D+ YDPKA PVI+ I  +D+V EN+  A  +EGI  D F  +C+SN+ +++++     PW C+ V+G S  V P  C  L ++  PE  S C +
Sbjct:   59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQ-GPEKTSLCNF 468          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.393e-34
Identity = 126/434 (29.03%), Postives = 187/434 (43.09%), Query Frame = 1
Query:  127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGS---FDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS----MFRNKTL--DYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGYSDLVLPEACEPLKERIFPEHCSDCYYLSNQIQSSKSQNRG 1377
            ++ ++GAVGDG   +T+AF       N+   K  A L VP  +    +   F       L    D  I+   +P  W                 K  K  +    L+D  + G  G IDGQG  WW+    +   +T+  D  RP  I++  S  V +  LT +NSP + L    C  V +Q + I AP DSPNTDGID  +S    IE C I TGDD IAI +G            +NI I  L+       GI+IGS         VS VH+   +F D+   +RIKT  G  G    I   NV + N +  I     Y        + ++   I+ +T K++ G +  TA  I+ +  D+     + LSN+ L ++S  P +C     +G+    L   C+ L+    P+     + L  Q  +   +N+G
Sbjct:   60 NVEQYGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHLSFKVDGTIVAQPDPARW-----------------KNSKIWLQFAQLTDFNLMGT-GVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLI--CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTS-ATAAAIQLMCSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIPTCKNLRPGPSPKE----FELQQQPTTVMDENKG 454          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.212e-30
Identity = 110/353 (31.16%), Postives = 171/353 (48.44%), Query Frame = 1
Query:  118 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGS--TNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGG----VSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLY-GEHPDDAYDPKALPV-IEKITIKDVVGENIKTAGL 1152
            +++ +T+FGAVGDGVT +++AF  A  +    +  G  +  VP G            +T  L +     GS  + P    ++  L +  +G    G + + +++  ++  ++I G+ G I+GQGS WW          +RP  ++  +   + +S LT L+SP   +H   C++VT+  + I AP  SPNTDGID  +S NV I+DC I+TGDD IAI SG            +NI I  +        GI+IGS    G    V  V +++  F  +    RIKT  G  GY R I    +TL NV+  I     Y G   D+A D K+  V + K+   + +G +    G+
Sbjct:   22 NALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG------------MTFML-QPLKFQGSCKSTPVFVQMLGKLVAPSKG-NWKGDKDQWILF-TDIEGLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGV 337          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.559e-30
Identity = 119/411 (28.95%), Postives = 178/411 (43.31%), Query Frame = 1
Query:  127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLW--------LDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS----MFRNKTL--DYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGG----VSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGYSDLVLPEACEPL 1293
            ++  +GAVGDG   +T AF+      N+  +K  A   VP  +       ++++L  +           D  I    +P  W                 K  K  ++   L+D  + G  G IDGQG+ WWS        +T+  D  RP  I++  S  V +  LT  NSP + L    C  V +Q + I AP DSPNTDGID  +S    IE C I TGDD +A+ +G            +NI I  L        G++IGS   G     VS VH++  +F D+   +RIKT  G  G   +I   NV + N +  I     Y        + ++   I+ +T K++ G +  TA  I+ +  D+    N+ LSN+ L ++S     C      GY    L  +C+ L
Sbjct:   61 NVEHYGAVGDGKHDSTDAFEKT---WNAACNKLSAVFLVPANKKF-----VVNNLVFYGPCQPHFSFKVDGTIAAYPDPAKW-----------------KNSKIWMHFARLTDFNLMGT-GVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLT--CGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAA-IQLMCSDSVPCSNIKLSNVFLKLTSGKVATCVNKNANGYYTNPLNPSCKSL 431          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.030e-28
Identity = 119/407 (29.24%), Postives = 177/407 (43.49%), Query Frame = 1
Query:  127 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGS---FDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWS------MFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNF--VNVCLSNIVLNVSSNYPWNC--SYVKGY-SDLVLPEACEPL 1293
            ++ ++GAVGDG    T+AF  A     +   K  A L VP  +    +   F+           D +I    NP  W                 K ++  +    L+   + G  G IDGQG  WW+        R    D  RP  I+   STG++I  L  +NSP + L    C  V +  ++I AP DSPNTDGID  +S N  ++   I TGDD +AI +G            +NI+I  L+       GI+IGS         VS VH+   +F D+   +RIKT  G  G   +I   NV + N +  I     Y        + ++   I+ +T K++ G +  TA  I+    D+    ++ LS+I L ++S    +C      GY S  V+P AC+ L
Sbjct:   60 NVEKYGAVGDGKHDCTEAFSTA---WQAACKKPSAMLLVPGNKKFVVNNLFFNGPCQPHFTFKVDGIIAAYQNPASW-----------------KNNRIWLQFAKLTGFTLMGK-GVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLI--CGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTS-ATAAAIQLKCSDSMPCKDIKLSDISLKLTSGKIASCLNDNANGYFSGHVIP-ACKNL 430          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR2_PECPM (Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.800e-23
Identity = 104/346 (30.06%), Postives = 158/346 (45.66%), Query Frame = 1
Query:  256 WLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSI--------WWSMFRN---KTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSH--VTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCT-NI-IIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYPWNCSYV 1248
            +L+G   L S ++L +DK   +    N + +   +  PS     +  GK   + I   + ++  I G  GTIDGQG +        WW +  +   K L    P LI++  S    + N++ +NSP    H V+      T  K TI  P  + NTDGIDP SS N+ I    I+TGDD +AIK+         GR  T NI I+H   G   T  G++IGSE + GV  V ++D++   +   +RIK+     G V  +  +NV + NV   I    +Y     +  +   +P    IT KDV  E  K   ++ G      + V + N+ L  +S+  W    V
Sbjct:   78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA-------YKGRAETRNISILHNDFG---TGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDVTSE-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNV 398          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.785e-23
Identity = 103/346 (29.77%), Postives = 157/346 (45.38%), Query Frame = 1
Query:  256 WLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVIITGNNGTIDGQGSI--------WWSMFRN---KTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSH--VTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCT-NI-IIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYPWNCSYV 1248
            +L+G   L S ++L +DK   +    N + +   +  PS     +  GK   + I   + ++  I G  GTIDGQG +        WW +  +   K L    P LI++  S    + N++ +NSP    H V+      T  K TI  P  + NTDGIDP SS N+ I    ISTGDD +AIK+         GR  T NI I+H   G   T  G++IGSE + GV  V ++D+    +   +RIK+     G V  +  +NV + NV   I    +Y     +  +   +P    IT KD+  +  K   ++ G      + V + N+ L  +S+  W    V
Sbjct:   78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDTNGKGCDAFITATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA-------YKGRSETRNISILHNEFG---TGHGMSIGSE-TMGVYNVTVDDLIMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDITSQ-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNV 398          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.645e-22
Identity = 111/383 (28.98%), Postives = 162/383 (42.30%), Query Frame = 1
Query:  115 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYG--RNLSDVIITGNNGTIDGQGSIWW--SMFRNKTLDYTR-PHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEK--ITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYP 1230
            P +VS+++FGA GDG T +T+AF NA  +  + +  G   L VP G               +L K   + G  N      +    S  + R       K +++    NLS  +  G+ G +DG G  WW  S  RNK    T+ P  +   NS  +++ NL   N+    +    CS+V V  V + AP DSPNTDGI   ++ N+ + +  I TGDD I+I+SG             N+ I+ +        GI+IGS         VS V ++  +   +   +RIKT  G  G   NI   N+ + NV   I          D  Y  K+    EK  + +K+VV  +I      E              I  N S NYP
Sbjct:   65 PTTVSVSDFGAKGDGKTDDTQAFVNA--WKKACSSNGAVNLLVPKGN-------------TYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLS--VDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDIT--CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIII--------DQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENA------------ITFNCSKNYP 397          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.246e-22
Identity = 107/383 (27.94%), Postives = 167/383 (43.60%), Query Frame = 1
Query:  109 VRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNP-EDWPVVDPLPSYGRGRELPGKRHKSLIYG-RNLSDVIITGNNGTIDGQGSIWW--SMFRNKTLDYTR-PHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGS----EMSGGVSEVHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYP 1230
            +   +VS++ FGA GDG T +T+AF+ A  +  + +  G     VP G+              +L K     G      ++ ++  L +  +  +   K H  ++    NLS  I  G+ G I+G G  WW  S   +K+   T+ P  + L N   + + NL   N+    +    C+ V V  V I AP DSPNTDGI   ++ N+ + +  I TGDD I+I+ G             N+ I  L        GI+IGS         VS ++++  +F +S   +RIKT  G  G  +NI   N+ + NV   I     Y +  D   D ++      + +K+VV +N         I G +  +V    I LN S  YP
Sbjct:   63 LEASTVSVSNFGAKGDGKTDDTQAFKKA--WKKACSTNGVTTFLVPKGK-------------TYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLS--IDGGSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQ-----------NLQIFDLT--CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDK-DKCEDQESA-----VQVKNVVYKN---------ISGTSATDVA---ITLNCSEKYP 397          
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.889e-21
Identity = 76/228 (33.33%), Postives = 106/228 (46.49%), Query Frame = 1
Query:  541 IELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKS------GWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSEVHIEDIQFYDSHTAIRIKT-SPGRGGYVRNIYVTNVTLANVDIAIRFTGLYGEHPD-DAYDP-----------KALPVIEKITIKDVVGENIK-TAGLIEGI 1164
            + L++     +   T  N+  WT+HP  C  +T    TI AP DSPNTDG +P+S  NV I     S GDD IA+K+      G D++        T  I  R         G+ IGSEMSGGV +V +ED     +   +R+KT +   GG V NI +  V L  V  A+     Y  H D D +D               P ++ IT++DV   N+   AG+  G+
Sbjct:   25 LHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE-----TRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHY--HCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGL 245          
The following BLAST results are available for this feature:
BLAST of Phvul.001G218400.3 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PGLR_VITVI1.270e-15653.53Probable polygalacturonase OS=Vitis vinifera OX=29... [more]
PGLR2_CHAOB5.393e-3429.03Polygalacturonase OS=Chamaecyparis obtusa OX=13415... [more]
PGLR3_ARATH1.212e-3031.16Probable polygalacturonase At3g15720 OS=Arabidopsi... [more]
PGLR2_JUNAS1.559e-3028.95Polygalacturonase OS=Juniperus ashei OX=13101 GN=J... [more]
PGLR2_CRYJA1.030e-2829.24Polygalacturonase OS=Cryptomeria japonica OX=3369 ... [more]
PGLR2_PECPM5.800e-2330.06Endo-polygalacturonase OS=Pectobacterium parmentie... [more]
PGLR1_PECCC9.785e-2329.77Endo-polygalacturonase OS=Pectobacterium carotovor... [more]
ADPG2_ARATH8.645e-2228.98Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX... [more]
ADPG1_ARATH9.246e-2227.94Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX... [more]
PGLR_RHIRD1.889e-2133.33Polygalacturonase OS=Rhizobium radiobacter OX=358 ... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 209..235
e-value: 630.0
score: 8.7
coord: 236..268
e-value: 390.0
score: 9.8
coord: 298..319
e-value: 160.0
score: 11.1
coord: 327..348
e-value: 510.0
score: 9.3
coord: 270..292
e-value: 3300.0
score: 3.5
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 137..417
e-value: 6.4E-42
score: 143.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 25..419
e-value: 9.8E-121
score: 405.5
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 34..431

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.001G218400.3_Pv_G19833_v2.1

>Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=465bp
MRRPSTLVDVLLVLALLSCSPWIVWSNTLCQETNDEVRPHSVSITEFGAV
GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLW
LDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGKRHKSLIYGRNLSDVII
TGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSP
FWTLHPVYCSHVTVQKVTIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGD
DLIAIKSGWDEYGIRYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSE
VHIEDIQFYDSHTAIRIKTSPGRGGYVRNIYVTNVTLANVDIAIRFTGLY
GEHPDDAYDPKALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSN
IVLNVSSNYPWNCSYVKGYSDLVLPEACEPLKERIFPEHCSDCYYLSNQI
QSSKSQNRGQRNFR*
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mRNA from alignment at Chr01:47398501..47402342+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3; organism=Phaseolus vulgaris; type=mRNA; length=3842bp; location=Sequence derived from: Chr01:47398501..47402342+ (Phaseolus vulgaris
ATGTTGACTGGTATAGGAAACACAGAAGAGAAGAAATGATTAGCAGTATG AAGTGGTTAAAGTTAAAACATAGTATGATTAAAAATGTTGAGGTGAGGGA GTTTAGGAAATGGAAATTGGGGTTGGGATGAAAGAAAGTATTGTGAGTTG TCAGGAGCTACACACAGGGAGGGAAGTGGAACAGTAAAGTGAAGCTAGAA GACTACATGCAAAGCTAAATTATGAGGAAAGCTGTTACCTTAGCAGTTGG CGTTGTCTGAACTTGTCTGTGTCTGTGTGTAATGGGAGTCACTGTCTCCG CTTTAGAAATAGAACCGGTTACTTAGAAAACAAACGCAAAATAAGATACC ACTCCTGTGATTAATGAGTTCATCACCAGTCCCATCTTCAAAATCATTTG AGTTTCTCTTTCCTCACCCTTCTGGAGAGAGAGTTTGGAGGACTTGAAGA AGCTAGGGGGGGTCCTACTGCTTATTGTTTGGAGGGCAGTAACAGTCCCT GTCAATGATTTTTACTTGGGTGGTGACTCTCATTGACCCACCCAATCAAT ATCACACTTGCTTATTGCTGGGGTGGGGATTTTAATCAATGAACCAAGCC TCCTCCTCTTCACATTTGCTCATTTCAGCCTTTCTTTTCTCTCTGGGTCT TTTTCATCTAGGAGAACTTGGAGTTAGAGTTGGAACATAAAGGGAAACCC GGATCTTAGTAGTATGAGGAGACCTTCAACAGTAAGTTCTCTATCATTAC TTCTTTCTCTGTCATTTCCTCCATTCTCCCTTGGAGAGCTCCCCATCTCA CTTTACCCCCTCACAAACTTAATACTGGATGGAGTAAGATCTGCAGGTGA AATCCTTTTCAGACAGATGAAGAGTAACACTGGTTTGATCATCCACTGTT CATCTTCTTTTATAAATTCTGGCACTTGGAAAGTGGAACACTTGGTGGTG ATTGGTTTTTTACTTTTTCTTGCTCTTTCTGTGTTTAATTTAAATTTAAA CATCTACTTGAGCTATTAACTGTGGAGAAAATGTAGCTGATGATCTGAGG AGATTTTCAACTCCTCTAAGTTGAATCGTGTGTTGCTGTTTCTAGATCCT ACCTGAATTTCATAATTTTTCTGGTCTTCTTTGTTTTGGCTGAAGAAGCA TGTGAATTACTGTTGTTGTTCATGGTTTAATAAAATTGATGAAATGGGAA AGTTACTCACATTCTCACTAGTAGCACATGGTAACTGATGGTGAAAGTTT CTCTTGCAGCTCGTGGATGTGCTTCTGGTACTTGCATTGCTCAGCTGTAG CCCATGGATAGTATGGAGCAACACACTTTGCCAAGAGACAAACGACGAAG TTCGACCTCACAGCGTCAGCATCACCGAATTTGGTGCAGTTGGCGATGGG GTCACTCTCAACACAAAAGCATTTCAAAATGCCATCTTCTACCTGAATTC CTTTGCTGACAAAGGTGGAGCCAAGCTTTTTGTCCCGGATGGTCGGTGGT TAACCGGTAGTTTTGATCTCATCAGTCATCTAACTTTGTGGTTGGACAAG GATGCAGTAATTCTTGGATCAACGGTAAGTCACTCTCTGTAAATAATGCA GGACAAAAGAGGAAGTTGCTTAGCTGGTTTGTCTTAGTTTTTAGTAAGTA ATTTGCCATACAATGCAGGGATTGTATTTTAGCTTCTAAAAAGTTCGGCT AACTTGGGTTGAAGTCCTACAAACTTGATAGTGTAATCTGTTCAGACATT CGACGATGAACTTCTTTATAACTTATGCATGTTCCAATTTTGACATGCAT GTCCCGCTTGTTACAGAACCCTGAAGATTGGCCAGTTGTTGATCCTCTAC CGTCTTATGGAAGAGGAAGAGAGTTGCCAGGTAAAAGGCATAAGAGCCTC ATTTATGGGCGCAATTTGAGTGATGTGATCATAACAGGTTAGTAACGTTC AACACAATCATCATATTCTCAATACATAAATTGGTGATATTGTCATTGTA TCAATGAAGGCAATAACGGGACTATCGATGGTCAAGGGAGTATCTGGTGG AGCATGTTTAGGAACAAAACTCTGGATTATACACGTCCCCATTTGATAGA ATTGATGAACTCAACAGGGGTCCTCATTTCAAATTTAACCTTCTTGAATT CTCCATTTTGGACACTCCATCCTGTGTATTGCAGGTTTGTCCTCCACTCA AGGATTGAATTTGTATTTTATTCCTTGTTTTCCGTAGTTCAAGTACTTCC ATTGCATTTTTAAAACTGTGCAATAGTGGAGCTTTCATGATTAGGGGCAG ATTTGAGACTGTTTTTCTGGATGAACAGCCATGTTACAGTTCAGAAAGTG ACGATCTTTGCTCCTCTTGATTCTCCAAATACTGATGGGATTGATCCAGG TAAACTATTCTGCAATTGACAACTACCAAATATTCTACCTTAATTTGTCA TAAAATGTTTTGAAGAAAAACTCACTTGAGCTTAAATGAAGGCAGAATAT CTAAATTTGTATGCAATTGTGCATCATGGTAAAGGTAATAAATATGCTAG ATTTAAAGCAATGTACCTATAAACAGTGGTTACATCCTCACAAGTCACAA TTATTTTGCTTTAGAAGATTTATCAGATTCTCACACACATTACCTTTAAA ATGCATCCAGATTCTTCAGACAATGTTTGCATTGAAGACTGTTACATAAG CACTGGTGATGACCTGATTGCGATCAAGAGCGGGTGGGATGAGTATGGCA TTAGATACGGTCGCCCCTGCACAAACATTATCATCCACAGGCTTGTTGGT AAAACTCAAACGAGTGCAGGGATTGCAATAGGAAGTGAGATGTCTGGTGG TGTATCTGAAGTTCATATAGAAGATATTCAATTCTACGATTCACATACTG CAATCAGAATAAAGACGTCTCCTGGAAGGGGGGGTTATGTTAGAAACATC TATGTCACAAACGTGACCTTGGCTAATGTGGATATTGCTATTAGGTTCAC TGGTTTATATGGGGAACATCCAGATGATGCTTATGACCCAAAGGCTCTGC CTGTAATAGAAAAGATTACAATCAAGGATGTGGTGGGAGAGAATATCAAA ACTGCAGGTCTTATAGAGGGTATAGAAGGTGACAATTTTGTGAACGTTTG CTTATCAAACATTGTCCTTAATGTGAGCTCAAACTATCCATGGAACTGCT CCTATGTTAAAGGATATTCTGACCTGGTTCTGCCAGAAGCTTGTGAGCCT CTCAAAGAAAGAATATTCCCTGAGCATTGTTCAGATTGTTACTATTTGTC AAATCAAATTCAGAGTTCGAAGAGCCAAAATAGAGGTGCTTGGTTTATGT CTTGGTAAATTGTGGACTTTATAGCAGCATTATTATGCTACTAAAGCTCA CTTTATAGCTGAAATTTGATTGGTGCATTTTTTCAGCAGGGCAAAGAAAC TTCAGGTGACATAAGAGGTTGAGTAGAATTGCCGAACTGTGATTTTGCAT CTTCAGAAAGATACCAAGAAATGATTGCTTTTTGTAGCTTGTGTGCAGTG ACAAATAATTGAGTGATTTATCAGAAATAGGAAGTTGGATGATTTCGTGT CTTGCTTTCTCTAGCTACTATGGCTTTGGAAAGAAATTACAAAGTTTTGT GTTTCAGTTTATTTTAAGGGAAGGAGTGCTTTTGGCTGTTGATAGAGGTG AGATATGGTTACTCTGACATAACTCCCTTTTGCCAAAAATGTGATCCTTC ATAGGAGATTTTGCAGTTGTACTAGTCAGGTGTTTGTTAGTTCTACATCT CTTTTGTTTGAATAAGGAATCCAAAAAATAAACTTCCTAGGA
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Coding sequence (CDS) from alignment at Chr01:47398501..47402342+

>Phvul.001G218400.3_Pv_G19833_v2.1 ID=Phvul.001G218400.3_Pv_G19833_v2.1; Name=Phvul.001G218400.3; organism=Phaseolus vulgaris; type=CDS; length=1395bp; location=Sequence derived from: Chr01:47398501..47402342+ (Phaseolus vulgaris
ATGAGGAGACCTTCAACACTCGTGGATGTGCTTCTGGTACTTGCATTGCT
CAGCTGTAGCCCATGGATAGTATGGAGCAACACACTTTGCCAAGAGACAA
ACGACGAAGTTCGACCTCACAGCGTCAGCATCACCGAATTTGGTGCAGTT
GGCGATGGGGTCACTCTCAACACAAAAGCATTTCAAAATGCCATCTTCTA
CCTGAATTCCTTTGCTGACAAAGGTGGAGCCAAGCTTTTTGTCCCGGATG
GTCGGTGGTTAACCGGTAGTTTTGATCTCATCAGTCATCTAACTTTGTGG
TTGGACAAGGATGCAGTAATTCTTGGATCAACGAACCCTGAAGATTGGCC
AGTTGTTGATCCTCTACCGTCTTATGGAAGAGGAAGAGAGTTGCCAGGTA
AAAGGCATAAGAGCCTCATTTATGGGCGCAATTTGAGTGATGTGATCATA
ACAGGCAATAACGGGACTATCGATGGTCAAGGGAGTATCTGGTGGAGCAT
GTTTAGGAACAAAACTCTGGATTATACACGTCCCCATTTGATAGAATTGA
TGAACTCAACAGGGGTCCTCATTTCAAATTTAACCTTCTTGAATTCTCCA
TTTTGGACACTCCATCCTGTGTATTGCAGCCATGTTACAGTTCAGAAAGT
GACGATCTTTGCTCCTCTTGATTCTCCAAATACTGATGGGATTGATCCAG
ATTCTTCAGACAATGTTTGCATTGAAGACTGTTACATAAGCACTGGTGAT
GACCTGATTGCGATCAAGAGCGGGTGGGATGAGTATGGCATTAGATACGG
TCGCCCCTGCACAAACATTATCATCCACAGGCTTGTTGGTAAAACTCAAA
CGAGTGCAGGGATTGCAATAGGAAGTGAGATGTCTGGTGGTGTATCTGAA
GTTCATATAGAAGATATTCAATTCTACGATTCACATACTGCAATCAGAAT
AAAGACGTCTCCTGGAAGGGGGGGTTATGTTAGAAACATCTATGTCACAA
ACGTGACCTTGGCTAATGTGGATATTGCTATTAGGTTCACTGGTTTATAT
GGGGAACATCCAGATGATGCTTATGACCCAAAGGCTCTGCCTGTAATAGA
AAAGATTACAATCAAGGATGTGGTGGGAGAGAATATCAAAACTGCAGGTC
TTATAGAGGGTATAGAAGGTGACAATTTTGTGAACGTTTGCTTATCAAAC
ATTGTCCTTAATGTGAGCTCAAACTATCCATGGAACTGCTCCTATGTTAA
AGGATATTCTGACCTGGTTCTGCCAGAAGCTTGTGAGCCTCTCAAAGAAA
GAATATTCCCTGAGCATTGTTCAGATTGTTACTATTTGTCAAATCAAATT
CAGAGTTCGAAGAGCCAAAATAGAGGGCAAAGAAACTTCAGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity