Phvul.002G312004.2

Transcript Overview
NamePhvul.002G312004.2
Unique NamePhvul.002G312004.2_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02supercontigChr02:47899723..47904428 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL060Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR152Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR155Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR186Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL007Pisum sativum Cameor genome v1aPisum sativum
pspvL442Pisum sativum Cameor genome v1aPisum sativum
pvvuR206Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR247Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR263Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvL766Pisum sativum Cameor genome v1aPisum sativum
caipvL0032Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL031Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL148Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL025Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caipvL0567Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0780Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL507Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL1037Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL440Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL926Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL583Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL783Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0068Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0509Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1165Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1170Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0130Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0603Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0848Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1102Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL265Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL683Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR189Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR240Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR262Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR254Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR267Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR293Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR294Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR248Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR262Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR290Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR182Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR211Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR231Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR256Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR204Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR250Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvuaR232Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR284Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR295Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvuaR255Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR310Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL414Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL562Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL754Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL006Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL581Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL666Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL433Cicer arietinum
carpvL565Cicer arietinum
carpvL777Cicer arietinum
ccapvL106Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL367Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL735Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL800Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR242Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR269Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR298Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR314Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR342Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR280Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR299Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR247Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR246Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR294Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR310Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR336Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR347Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR303Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR332Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR343Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR191Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR196Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR229Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR233Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR236Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR269Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR246Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR248Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_05961Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cr_21334.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014650271.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan11g083700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan10g013900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.2g156160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_32750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.01G027400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun03g022000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_30754Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.6g188040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_01892Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_01G00228.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_22921.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_04377.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_21023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.6g144880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_016134Cajanus cajan Asha genome v1.0Cajanus cajan
jg46919.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr03.816Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g192920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_23052.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun03g022000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat07G0041600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_027334357.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat1g043480.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.1g156840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cc_v2.0_17564.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_05886Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.02G098300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.01G019700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058878292.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_15735.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.02G075600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr09.1752.1.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004503391.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_011404Cajanus cajan Asha genome v1.0Cajanus cajan
jg27440.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_14630.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va01G002880.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_02G00808.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg55607.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr09.1000687Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.009G107501.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr02.1780Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.002G312004Phvul.002G312004_Pv_G19833_v2.1Phaseolus vulgarisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312004.2.v2.1.five_prime_UTR.1Phvul.002G312004.2.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312004.2.v2.1.CDS.1Phvul.002G312004.2.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.2Phvul.002G312004.2.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.3Phvul.002G312004.2.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.4Phvul.002G312004.2.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.5Phvul.002G312004.2.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.6Phvul.002G312004.2.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312004.2.v2.1.CDS.7Phvul.002G312004.2.v2.1.CDS.7_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312004.2.v2.1.three_prime_UTR.1Phvul.002G312004.2.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312004.2Phvul.002G312004.2_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.002G312004.2_Pv_G19833_v2.1Phvul.002G312004.2_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


Homology
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: TCX5_ARATH (Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana OX=3702 GN=TCX5 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.101e-84
Identity = 150/189 (79.37%), Postives = 170/189 (89.95%), Query Frame = 1 
Query:  181 SASVRVGKPESPKSR-PRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSG 744
            +A +R   PESPK+R PRP  E ++ TP+K+KQCNCKHS+CLKLYCECFASG YC+GCNCVNC+NNV+NE ARREAVEATLERNP AFRPKIASSPHG RD RED GE+++LGKHNKGCHCKKSGCLK YCECFQANILCSENCKC+DCK FEGSEERQALFHG+ +N+M Y+QQAANAAITGA+GSSG
Sbjct:  101 NAPIRHPIPESPKARGPRPNVEGRDGTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRPKIASSPHGGRDKREDIGEVVLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSEERQALFHGEHSNHMAYLQQAANAAITGAVGSSG 289

HSP 2 Score: 70.0922 bits (170), Expect = 1.101e-84
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 2 
Query:  746 NNVRVPAPSSSLSPIPGARVGPSTLG-PSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFT 937
            NN R   P+S  SP P +R G +    PSK +YRSLLADIIQP  ++ LCSVLV V+G+AAKT T
Sbjct:  323 NNGRTGGPTSGTSPSPVSRAGGNASSVPSKFVYRSLLADIIQPHDVRALCSVLVTVAGEAAKTST 387
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: TCX6_ARATH (Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana OX=3702 GN=TCX6 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.110e-78
Identity = 160/288 (55.56%), Postives = 192/288 (66.67%), Query Frame = 1 
Query:    1 MGEGEGEGSDCAPKNVVTNDVVANALLPSEVPAKKLARQLDFTGFGGMXXXXXXXXXXXSSAS----------------------------------------VRVGKPESPKSRPRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSG 744
            MGEGE EG    PK   T++V   ++        K ARQLDFTG                +A+                                        +R  +PESP S PRP  E ++ TP+K+KQCNCKHS+CLKLYCECFASG YC+GCNCVNC+NNVENE ARR+AVE+TLERNPNAFRPKIA+SPHG RD+RE+ G++++L +HNKGCHCKKSGCLK YCECFQANILCSENCKC+DCK FEGSE RQ+LFHG+ ++N+ Y+Q  ANAAITGAIGSSG
Sbjct:    1 MGEGE-EGDKFPPK---TDEVTQESM--------KSARQLDFTGGSSDVEHSHSNQASSMAAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILHVPIRHPRPESPNSMPRPAGETRDGTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTLERNPNAFRPKIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSEVRQSLFHGEHSHNLAYLQH-ANAAITGAIGSSG 275

HSP 2 Score: 63.1586 bits (152), Expect = 1.110e-9
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 2 
Query:  692 IFSRQXXXXXXXXXXXXANNVRVPAPSSSLSPIPGARVGPS-TLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFT 937
            IF  Q         +  ANN R      + S   G+R G + +LGPSK++Y+SLLA+II+P  +K LCSVLV V+G+AAKT T
Sbjct:  290 IFFNQGTKDSSTHRLGQANNGR------TTSSQTGSRAGGNASLGPSKVVYKSLLANIIKPMDVKALCSVLVAVAGEAAKTLT 366
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: TCX7_ARATH (Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thaliana OX=3702 GN=TCX7 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.656e-59
Identity = 117/185 (63.24%), Postives = 143/185 (77.30%), Query Frame = 1 
Query:  193 RVGKPESPKSRPRPGFEIKEATP-KKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSG 744
            RV   +   SR     E KE TP K+QK CNCK+SKCLKLYCECFASG YC GCNCVNC+N +ENE++R+ A+   LERNP+AF+PKIA SPHG +D +E+  ++L++GKH+KGCHC+KSGCLK YCEC+QANILCSENC+C DCK FEGSEER+AL HG Q ++  YIQQ  NAA+  AI  S 
Sbjct:   68 RVSNQDPSTSRRHNEVESKENTPNKQQKHCNCKNSKCLKLYCECFASGSYCNGCNCVNCHNKLENESSRQVAISGILERNPDAFKPKIAGSPHGMKDLQENVQQVLLIGKHSKGCHCRKSGCLKKYCECYQANILCSENCRCQDCKNFEGSEERKALLHGSQVSD-TYIQQMTNAAVNRAIDMSA 251
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_DANRE (Protein lin-54 homolog OS=Danio rerio OX=7955 GN=lin54 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.056e-31
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1 
Query:  235 GFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            G    EA  + +K CNC  S+CLKLYC+CFA+G +C  CNCVNC+NN+++E+ R +A++A L+RNP AF+PKI     G  D R           H+KGC+CKKSGCLK YCEC++A I+CS  CKCM CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  534 GLSTSEANSRPRKPCNCTRSQCLKLYCDCFANGEFCNNCNCVNCFNNLDHESERLKAIKACLDRNPVAFKPKIGKGKEGESDRR-----------HSKGCNCKKSGCLKNYCECYEAKIMCSSICKCMGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 689
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_MOUSE (Protein lin-54 homolog OS=Mus musculus OX=10090 GN=Lin54 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.192e-29
Identity = 81/167 (48.50%), Postives = 105/167 (62.87%), Query Frame = 1 
Query:  235 GFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            G    E+T + +K CNC  S CLKLYC+CFA+G +C  CNC NCYNN+E+E  R++A++A L+RNP AF+PKI     G  D R           H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  511 GIIPSESTSRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 666
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_XENTR (Protein lin-54 homolog OS=Xenopus tropicalis OX=8364 GN=lin54 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.100e-29
Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 1 
Query:  226 PRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            P  G    E+  + +K CNC  S CLKLYC+CFA+G +C  CNC NCYNN+E+E  R++A++A L+RNP AF+PKI     G  D R           H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  500 PLNGIISSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 658
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BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_PONAB (Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=LIN54 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.469e-29
Identity = 80/167 (47.90%), Postives = 104/167 (62.28%), Query Frame = 1 
Query:  235 GFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            G    E+  + +K CNC  S CLKLYC+CFA+G +C  CNC NCYNN+E+E  R++A++A L+RNP AF+PKI     G  D R           H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  290 GIIPSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 445
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_RAT (Protein lin-54 homolog OS=Rattus norvegicus OX=10116 GN=Lin54 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.046e-28
Identity = 80/167 (47.90%), Postives = 104/167 (62.28%), Query Frame = 1 
Query:  235 GFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            G    E+  + +K CNC  S CLKLYC+CFA+G +C  CNC NCYNN+E+E  R++A++A L+RNP AF+PKI     G  D R           H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  511 GIIPSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 666
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_HUMAN (Protein lin-54 homolog OS=Homo sapiens OX=9606 GN=LIN54 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.076e-28
Identity = 80/167 (47.90%), Postives = 104/167 (62.28%), Query Frame = 1 
Query:  235 GFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFH-GDQNNNMVYIQQAANAAITGAI 732
            G    E+  + +K CNC  S CLKLYC+CFA+G +C  CNC NCYNN+E+E  R++A++A L+RNP AF+PKI     G  D R           H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CK FE S ER+ L H  D     V  Q AA   ++  I
Sbjct:  511 GIIPSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQI 666
[Close]
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Match: LIN54_CAEEL (Protein lin-54 OS=Caenorhabditis elegans OX=6239 GN=lin-54 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.082e-23
Identity = 70/160 (43.75%), Postives = 96/160 (60.00%), Query Frame = 1 
Query:  259 PKKQKQCNCKHSKCLKLYCECFASGIXXXXXXXXXXXXXXXXXXXXXXXXXXTLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCSENCKCMDCKKFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGS 738
            P ++K CNC  S+CLKLYC+CFA+G +C  CNC +C+NN+E ++ R +A+  +LERNPNAF+PKI  +  G  D         I   H KGCHCKKSGCLK YCEC++A + C++ CKC  C+  E     +    G   +N   +    NA+ T    S
Sbjct:  171 PGQRKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKPKIGIARGGITD---------IERLHQKGCHCKKSGCLKNYCECYEAKVPCTDRCKCKGCQNTETYRMTRYKNSGGAVSNTNALMSLTNASSTATPDS 321
The following BLAST results are available for this feature:
BLAST of Phvul.002G312004.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
TCX5_ARATH1.101e-8479.37Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thal... [more]
TCX6_ARATH1.110e-7855.56Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thal... [more]
TCX7_ARATH1.656e-5963.24Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thal... [more]
LIN54_DANRE3.056e-3149.10Protein lin-54 homolog OS=Danio rerio OX=7955 GN=l... [more]
LIN54_MOUSE2.192e-2948.50Protein lin-54 homolog OS=Mus musculus OX=10090 GN... [more]
LIN54_XENTR7.100e-2947.65Protein lin-54 homolog OS=Xenopus tropicalis OX=83... [more]
LIN54_PONAB7.469e-2947.90Protein lin-54 homolog OS=Pongo abelii OX=9601 GN=... [more]
LIN54_RAT1.046e-2847.90Protein lin-54 homolog OS=Rattus norvegicus OX=101... [more]
LIN54_HUMAN1.076e-2847.90Protein lin-54 homolog OS=Homo sapiens OX=9606 GN=... [more]
LIN54_CAEEL4.082e-2343.75Protein lin-54 OS=Caenorhabditis elegans OX=6239 G... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..83
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 88..128
e-value: 5.0E-16
score: 69.2
coord: 173..214
e-value: 1.7E-16
score: 70.8
IPR005172CRC domainPFAMPF03638TCRcoord: 90..125
e-value: 3.3E-11
score: 43.3
coord: 176..209
e-value: 5.9E-12
score: 45.7
IPR005172CRC domainPROSITEPS51634CRCcoord: 89..213
score: 35.937

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.002G312004.2_Pv_G19833_v2.1

>Phvul.002G312004.2_Pv_G19833_v2.1 ID=Phvul.002G312004.2_Pv_G19833_v2.1; Name=Phvul.002G312004.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=335bp
MGEGEGEGSDCAPKNVVTNDVVANALLPSEVPAKKLARQLDFTGFGGMPP
QPPVVLPLPSSASVRVGKPESPKSRPRPGFEIKEATPKKQKQCNCKHSKC
LKLYCECFASGIYCEGCNCVNCYNNVENEAARREAVEATLERNPNAFRPK
IASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKMYCECFQANILCS
ENCKCMDCKKFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGKQ
CQSPCTVLILVTYSRCPCWTINIRSFKINVQVSFSRHHTTTAPEGTLLSF
GASIGTSRKDIYSVLGDQIVDCDDFCVGQIGLAD*
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mRNA from alignment at Chr02:47899723..47904428+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.002G312004.2_Pv_G19833_v2.1 ID=Phvul.002G312004.2_Pv_G19833_v2.1; Name=Phvul.002G312004.2; organism=Phaseolus vulgaris; type=mRNA; length=4706bp; location=Sequence derived from: Chr02:47899723..47904428+ (Phaseolus vulgaris
GAGCGTGGGATGAAGAGGGGGAGGAGATCTGGCCGTTGAATATTTACGAA
AATTGAATTTGAAAAGCTTGGGAGAGAGAGGGAGGAAGAGAGGGGCGAAC
GCGAACACCACCAACGAAAGAAACACGAAGCCCCTCTCTTCTCTTCTCTT
CTCCTAATCACACACTCTTTTTCTTCTTCTTCTTCTTCTTCTCTTTGTTC
TTCTTCTTCTTCTTTCTTTTTTTCTATCTATTGTGTCTTGTGTCGGTGTT
TGGATCAAATTGTCTTGATTCCAGAGTTGCACGCGCAGACGCGTGGTCTT
TTGGATCTGAAACCACTGAATTTGAACTTAATTTTTGATGAATTTGCTGC
TGATTGTTGTTGATGTTATCGTCGATAATCGGTGAGTGGAGTGAGTGAGG
TTGTTACTTTTTTTAAATTATTGTTTTGATGGGGGAAGGGGAGGGTGAGG
GGAGTGATTGTGCTCCCAAGAATGTTGTGACTAACGACGTCGTCGCGAAT
GCGCTTTTGCCGTCTGAGGTTCCCGCCAAGAAGCTCGCCAGGCAGCTCGA
TTTCACCGGCTTCGGCGGGATGCCGCCGCAGCCACCGGTTGTTTTGCCGC
TGCCGTCTTCTGCTTCCGTCAGGGTTGGGTGAGTTCTTGAATTCTGTTCT
TGTTTCTATTTTTTTCATTTCTCATGGAATTTCAGATTTCTGAGAAAAGG
AAGGTGTAATTGTGTGTTTTTTTTTTTAAAAATATCTGAATTTTTTGGAA
ATTCTGGGATTGTGAGTTTGTGAGTAAAGTTTCGATTTTGATGTTTCTGT
TTGGGCGTATAACACATGCGCGGTGTTTGTTTGTTAGTTATCAAGTTGAG
TTGCAATCAGAAATTGTGAAGGAAGTGACTGATGATTATTATTATTATTA
GTTTTGGTTAATTGAATTTTATTTTAGTTTTTCTAGCTAAGGTGTTTGTT
GACTGTTTGAATTGGTGTTTGGGCTTTTGCTCTTTGGTCTTCAATTAAAG
TTTGTTTTATTCAGGAAACCAGAATCTCCAAAGTCGAGACCGAGGCCTGG
CTTTGAAATTAAAGAAGCAACTCCCAAGAAGCAAAAGCAGTGCAATTGTA
AACATTCAAAATGCTTGAAGCTGTAAGTGAAATACTCTGGCTTTCTCTGT
CATCTTGTTATTGTGCTTTTCATACTTGTTGGATGGAATGGTAAGTTATC
TGGAGCTAATGTTTGAAATGTCTTGCGCAGATATTGTGAATGTTTTGCTT
CGGGAATATATTGTGAGGGTTGCAACTGTGTAAATTGCTATAACAATGTG
GAAAATGAAGCTGCAAGACGAGAAGCGGTGGAAGCTACTTTGGAACGCAA
TCCAAATGCGTTCAGGCCGAAAATTGCAAGCAGCCCTCATGGAACACGTG
ATAGCAGGGTATGTGGTTGGTTTAGCTTTTTTAACTGTTAGTGTTGCGTG
TCATGTTTTATATTGTGGATCATTACCATTGATTTAAGGTATTGTTTTTA
TTGATTAGAAATTTAAAACCTTGTCAGGTTTCATTCTGATACAGTGGTGC
AAGACATTTATCTTGTTATCTTTTATTAATTTTCTTTAAATTCATTGTGT
ACTTACATGCAAAGCTTCTTTATTGTAATTGGAGGTCACTTCTGCTTGTG
TACATGTTTTCCCCATTGCATAATTTTAAGTTCCATGAAGTGCATCATTT
CATAATTATGGAATCATGCCTTTGCTTATGACTCAACCATTTTTGGGTTT
TATAGTTTTGTAGAAATATGCAATTTTCTTGTATATTAAATATCGTTACT
TGTTACATTAATTGTCTCTATCCCCTACCTATCACTCCGTTGATGTTGTT
TTCAACAAGCCATAATTTAGATAATTCATTTTTTTATCTCCTAAAATGTT
GCGTCAATGAAATCATTACATTTCATTTTAGTTTCCTTATTTGCTTTTTC
TTAAATTTAGTCACACAAGCATACTCAGGGCTCAGGTAAGTGAGCTTTTT
CAAGCACGTGTCTCATTCGTCGACACAAACTTGGCTTTTTAAGGTATAAA
CATTTTGCATGACAGTAACCAATTGTTAAAACAGCTGACAAATTCACTTA
TATATGCTCTAAAGTGTAAAACTGTAAACAAATGATTTTTCTTCAGAAGG
TAGTAATTTTTCTAGTACTGATAAAAGTGTTACATTTTTTTTTTCTTTTC
AATTGTTTTTGACATCAAAATAAATGTAGGAGGATGCTGGGGAAATTTTG
ATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCT
CAAGATGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATT
GTAAGTGCATGGATTGCAAAAAATTTGAGGGTAGTGAAGAGAGACAGGCT
TTGTTCCATGGAGATCAAAACAACAACATGGTGTATATTCAGCAGGCAGC
CAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCAAGTTCAAATTAG
CTTTTTTAGAGTGAAAACTATAATGGGCATTTTTTATATCTAATCCATAT
CCAATAATGTTGTAATGTTCACCAGGCAAACAATGTCAGAGTCCCTGCAC
CGTCCTCATCCTTGTCACCTATTCCAGGTGCCCGTGTTGGACCATCAACA
TTAGGTCCTTCAAAATTAATGTACAGGTAGGACTGGCTAAATATTATGAA
ATGAATATATATTTATTTAATTTAGTCATTAACTTGATTATTGTTGAAGG
TCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAACTTTGCTC
AGTTTTGGTGCTAGTATCGGGACAAGCCGCAAAGACATTTACAGGTATAT
TGACATGTTACGTTGTCAATTACGAATTGCATCATATGTTTTAAAGTATT
ATCATTGTTGTTTTTTGTTTCTTCTTTATGAGTAGTGTGGTATTGACCAA
GAATAGATTTGCTGTCCCCCACTTTTTCCCTGCCTTTTCTCTTTCATATG
ATGAGTGAACATTATACATGCTCAAATTCTGCATGCTCAAATTGAATTGT
TACATCTGATAAGACTTTCTAATTTGTTGCTTTTCAAGTGCATGACAAAA
TGAAAACCAAACAAGTTTTCAGCCAAGGTAAAGTTCATTATTTTATTTAT
GACCATGTTGTTTATGTGGCATCAAACTAGTTTGAGGATTTAGTTAGCTA
AATAATAAATTACAGAATTCGACCTGATTTAATTGATAATGTACCTGCAA
ACAATAGTTTCCTTCATGGGAAATGGGAAAGCAAAAAAGGAAGTGCAATT
AATTAAAAGTTATTTATTTTGAAGTGGAATTAATTCTACGTGATCTCTAA
ATGTTTGGTACCCTGCCCATATGCTGATGTTATTTGCAACTGGATAGTTG
TTTGGTGAGTTTTGGAATCGGGGAGGGAGTGCAATCCTCAAGATGCTGGA
GTATTGAAAATTTTTAGCACCTTGAAATTTTATTATGCGTGAAAAAAAAG
TTATCTTATCCTTGAAATTTTATATGTTTTGGTGCAATTGTTTTATAATG
ATGTTGATGTTTTTGTTATAAAATTTAATTATCATTTAAATTAGTTGTTA
TTTATATTTTGTTATATTAGAAATGTCTACAAAATGTAAATTTTAAATTT
CTTAATTCTATAGTTCAACGATTGGCTTTATGTTAACTAGCTGGAATATA
TTTTAGTTACTGTTATGTATGATTTTATTTAAAACTATAAAATTGTTTTC
AGAAAACCTTTTATGATCAAGGACTTTCATCCCTTATCGTCTCCCTCATC
TTGATGAGTCATTCTTATTCCTCTAGTCACATTTTCAATCACAATTTTAT
AAGAAAAATGTCAAATTAGCATTCCACAAATTGAAATGCACATAAAAGAG
AATTAACGATTATTGTAATGTTGTCGGCAACTCCTTTTCTTAAGTCCTTC
TCCTCCATAGTCACAAACTTCAATTGCAATATTATAAGACAAAGGTTATA
TTAAGGTTTCACAAAGATTAATCAAAACATAGAAAAAGAAGGTGGGAAGT
AAGGTATACAAAAGAAAGTGAGAAGTAGGGCGGGTACGTGAGTTTATGCA
TAGAGAAAATATTCTGATCTAATAGAAATTAAAAATTGTTTCTTAAATCA
TTTGAAAACTATTTTTACATACATCTTTCATAAAACATTTCAAATAAAAT
TTTTGTTTTCAATTTTTTACCTAATATATTTTAAAATTTTGAAAATCTAA
AATTGTTTAAAATTTAAATTTGTTGAAAATTTAAATTTTTTTTTTCAGAA
TTTAAAGTATTTTTTGAAAAGGCTTTAGGAATTGAAAAATTTTAAAATTT
AATTTTTTTGAAAAATATAAGAAATGACAAAATGTGCATAATAATAAAAT
AAAATCAAATATTGATTAAAAGTGTTTTTTAATGATTAAAAGAATGAAAA
AAAATTAAAGAGGAAATCCATATATATATATATATATATATATAGGTATA
GATATAGGGGAGAATTTCATTTAGTATAACAAATCATTTTAAATTTTTTT
CCAAAGAAATTTTCCTCTTTTGTTTTTGCTTTTTGGTTGTGTGATTGTTG
TGCTAGCTTTCTTTGTAGTGTTCTCGGAGATCAAATCGTAGACTGTGATG
ATTTCTGTGTTGGCCAAATCGGCCTTGCCGACTAATCTGCTATATCACCA
CCCAGG
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Coding sequence (CDS) from alignment at Chr02:47899723..47904428+

>Phvul.002G312004.2_Pv_G19833_v2.1 ID=Phvul.002G312004.2_Pv_G19833_v2.1; Name=Phvul.002G312004.2; organism=Phaseolus vulgaris; type=CDS; length=1005bp; location=Sequence derived from: Chr02:47899723..47904428+ (Phaseolus vulgaris
ATGGGGGAAGGGGAGGGTGAGGGGAGTGATTGTGCTCCCAAGAATGTTGT
GACTAACGACGTCGTCGCGAATGCGCTTTTGCCGTCTGAGGTTCCCGCCA
AGAAGCTCGCCAGGCAGCTCGATTTCACCGGCTTCGGCGGGATGCCGCCG
CAGCCACCGGTTGTTTTGCCGCTGCCGTCTTCTGCTTCCGTCAGGGTTGG
GAAACCAGAATCTCCAAAGTCGAGACCGAGGCCTGGCTTTGAAATTAAAG
AAGCAACTCCCAAGAAGCAAAAGCAGTGCAATTGTAAACATTCAAAATGC
TTGAAGCTATATTGTGAATGTTTTGCTTCGGGAATATATTGTGAGGGTTG
CAACTGTGTAAATTGCTATAACAATGTGGAAAATGAAGCTGCAAGACGAG
AAGCGGTGGAAGCTACTTTGGAACGCAATCCAAATGCGTTCAGGCCGAAA
ATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGGGA
AATTTTGATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTG
GGTGCCTCAAGATGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCT
GAAAATTGTAAGTGCATGGATTGCAAAAAATTTGAGGGTAGTGAAGAGAG
ACAGGCTTTGTTCCATGGAGATCAAAACAACAACATGGTGTATATTCAGC
AGGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCAAACAA
TGTCAGAGTCCCTGCACCGTCCTCATCCTTGTCACCTATTCCAGGTGCCC
GTGTTGGACCATCAACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTT
TTAGCAGACATCATACAACCACAGCACCTGAAGGAACTTTGCTCAGTTTT
GGTGCTAGTATCGGGACAAGCCGCAAAGACATTTACAGTGTTCTCGGAGA
TCAAATCGTAGACTGTGATGATTTCTGTGTTGGCCAAATCGGCCTTGCCG
ACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC