Phvul.002G312800.1

Transcript Overview
NamePhvul.002G312800.1
Unique NamePhvul.002G312800.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02supercontigChr02:47975733..47978517 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL060Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR152Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR155Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL007Pisum sativum Cameor genome v1aPisum sativum
pspvL442Pisum sativum Cameor genome v1aPisum sativum
pvvuR206Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR247Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR263Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvL772Pisum sativum Cameor genome v1aPisum sativum
caipvL0032Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL031Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL148Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL025Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caipvL0567Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0780Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL507Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL440Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL926Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL583Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL783Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0068Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0509Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1170Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0130Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0603Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0848Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1102Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL265Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL683Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR189Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR240Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR262Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR254Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR267Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR293Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR294Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR248Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR262Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR290Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR182Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR211Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR231Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR256Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR204Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR250Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvuaR232Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR284Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR295Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvuaR255Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR310Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL414Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL562Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL754Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL006Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL191Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL247Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL581Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL666Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL433Cicer arietinum
carpvL565Cicer arietinum
carpvL777Cicer arietinum
ccapvL106Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL367Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL735Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL800Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR242Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR269Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR298Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR314Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR342Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR280Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR299Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR247Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR246Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR294Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR310Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR336Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR347Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR303Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR332Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR343Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR191Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR196Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR229Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR233Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR236Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR269Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR246Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR248Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_15732.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058876306.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.6g145320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.01G026600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_01G00222.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun03g021200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun03g021200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_22927.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.01G019100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_05966Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr03.823Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat07G0040600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004503386.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_04381.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va01G002750.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_016119Cajanus cajan Asha genome v1.0Cajanus cajan
Psat7g013400.1Pisum sativum Cameor genome v1aPisum sativum
jg27434.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014654267.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan11g083100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_00099Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr02.1001826Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.002G312800Phvul.002G312800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312800.1.v2.1.CDS.5Phvul.002G312800.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312800.1.v2.1.CDS.4Phvul.002G312800.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312800.1.v2.1.CDS.3Phvul.002G312800.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312800.1.v2.1.CDS.2Phvul.002G312800.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G312800.1.v2.1.CDS.1Phvul.002G312800.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312800.1.v2.1.three_prime_UTR.1Phvul.002G312800.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312800.1.v2.1.five_prime_UTR.1Phvul.002G312800.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G312800.1Phvul.002G312800.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.002G312800.1_Pv_G19833_v2.1Phvul.002G312800.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


Homology
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 343.969 bits (881), Expect = 3.352e-118
Identity = 176/263 (66.92%), Postives = 202/263 (76.81%), Query Frame = 1
Query:   43 NPNFTNPRLSNFINFP----FNSTRSFAPLSRRDFLCRAFRDSSEDTKAVLKXXXXXXXXXXXXXXXXRDAEKKEGPLPEWLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIAGTVSKDSCSIE 819
            NPNF      + + FP    FN+  +   L+RR   C   +DSSE TK+    D   GG G G      + E+K    PEWL+FT+DDA+TV  AIA+SLAFR F+AEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCA+DIVIFKSPPVLQEVGY+D DVFIKR+VAKEGD+VEV  G L+VNGV RNE +ILEPP YEM P RVPEN VFVMGDNRNNSYDSHVWGPLP KNIIGRSVFRYWPPNR++GTV +  C+++
Sbjct:   30 NPNFIQFTPKSQLLFPQRLNFNTGTN---LNRRTLSCYGIKDSSETTKSAPSLDSGDGGGGDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVSGTVLEGGCAVD 289          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.343e-75
Identity = 112/180 (62.22%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  274 LNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIAGTVSKDSCS 813
            LN  ++DAK    A+ +SL FR+ +AEP+ IPS SM PT DVGDR++AEKVSY+FRKP  SDIVIFK+PP+L E GYS  DVFIKR+VA EGD VEV  G L+VN   + ED++LEP  YEM+P  VPE YVFV+GDNRN S+DSH WGPLP KNIIGRSVFRYWPP++++  +  +  S
Sbjct:  180 LNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDIIHHEQVS 359          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 1.903e-74
Identity = 110/188 (58.51%), Postives = 144/188 (76.60%), Query Frame = 1
Query:  256 GPLPEWLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEV---GYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIAGTVSKDSC 810
            G + + L+  ++DAK    A+ +S+ FR+ +AEP+ IPS SMYPT D GDR++AEKVSY+FRKP  SDIVIFK+PP+L E    GYS +DVFIKR+VA EGD VEVR G L VN + + ED++LEP +YEM+P  VP+ YVFV+GDNRN S+DSH WGPLP +NI+GRSVFRYWPP++++ T+  D  
Sbjct:  144 GWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTIYHDQA 331          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.601e-53
Identity = 90/177 (50.85%), Postives = 116/177 (65.54%), Query Frame = 1
Query:  250 KEGPLPEWLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNR 780
            +  P+P    F  ++   ++ A+ ++L  R FVAEPRYIPS SM PT + GDRLV EKVSY+F  P   DI++F  P +LQ  GY     FIKRV+A  G  VEV  G +  +G    E+YILEPP Y +   RVP+  VFVMGDNRNNS DSHVWG LP +NIIG ++FR++P +R
Sbjct:    2 QNSPIPSPWQFIKENIPLLMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASR 178          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum OX=32059 GN=lepB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.924e-52
Identity = 79/166 (47.59%), Postives = 111/166 (66.87%), Query Frame = 1
Query:  289 DDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIA 786
            +  KT+  ++ ++L  RTFVAE RYIPS SM PT +V DRL+ EK+SY+F  P   DI++F     L++   S ++ FIKRV+   G+ V+V  G +++NG    E+YI  PP Y+  P +VP +   V+GDNRNNSYDSH WG +P +NIIGR+V R+WP NR+ 
Sbjct:   30 EGIKTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLG 195          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.256e-50
Identity = 89/205 (43.41%), Postives = 130/205 (63.41%), Query Frame = 1
Query:  241 AEKKEGPLPE--WLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGRSVFRYWPPNRIAGTVSKDS--CSIETTPENTET 843
            ++KKE P PE  WL       KT++ A+ +++  RTFVAE RYIPS SM PT  + DRL+ EK+SY  R P   +IV+F     L+   + D   FIKR++   GD V V +G++ VNG   +E+YI  PPAYE  P +VP++   V+GDNRNNSYDSH WG +P + ++GR+  R+WP  R+ G ++ D+   ++E +P+  E+
Sbjct:   10 SKKKESP-PENTWLEL----GKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHD--AFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRV-GLLTDDAEREAVEISPQAWES 206          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP_MYCLE (Probable signal peptidase I OS=Mycobacterium leprae (strain TN) OX=272631 GN=lepB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.091e-21
Identity = 75/228 (32.89%), Postives = 101/228 (44.30%), Query Frame = 1
Query:  304 VLAAIAISLAF--RTFVAEPRYIPSLSMYPTFD-----VGDRLVAEKVSYYFRKPCASDIVIFKSPP---------------------VLQEVGY--SDDDVFIKRVVAKEGDIVEVRK-GHLVVNG----------VERNEDYILEPP-AYEMKPTRVPENYVFVMGDNRNNSYDSHVW------------------GPLPSKNIIGRSVFRYWPPNRIAGTVSKDS 807
            +LA IAI L +   TFVA P  IPS SM PT       VGDR++ +K++Y F  P   D+++FK PP                      L  VG+   D++  +KRV+A  G  V+ R    L VNG          V  N D    P    E  P  VP+  ++VMGDNR +S DS                     G +P  N+IG++    WPP+R  G  S +S
Sbjct:   58 ILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSNVIGKARVVVWPPSRWGGVGSVNS 285          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP_MYCTU (Signal peptidase I OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=lepB PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.136e-21
Identity = 74/213 (34.74%), Postives = 97/213 (45.54%), Query Frame = 1
Query:  304 VLAAIAISLAF--RTFVAEPRYIPSLSMYPTFD-----VGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYS------------------------DDDVFIKRVVAKEGDIVEVRKG-HLVVNGVERNEDYI------LEPPAY-----EMKPTRVPENYVFVMGDNRNNSYDSHVWGPL-----------PSKNIIGRSVFRYWPPNR 780
            VLA IA+ L +   TFVA P  IPS SM PT       VGDR++ +K+SY F  P   D+++F+ PP    VGY                         D++  +KRV+A  G  V+ R    L VNG    E Y+       +P  Y     E  P  VP   V+VMGDNR +S DS    PL           P  N+IG++    WPP+R
Sbjct:   70 VLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWN-VGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSR 281          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEP_MYCTO (Signal peptidase I OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=lepB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.136e-21
Identity = 74/213 (34.74%), Postives = 97/213 (45.54%), Query Frame = 1
Query:  304 VLAAIAISLAF--RTFVAEPRYIPSLSMYPTFD-----VGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYS------------------------DDDVFIKRVVAKEGDIVEVRKG-HLVVNGVERNEDYI------LEPPAY-----EMKPTRVPENYVFVMGDNRNNSYDSHVWGPL-----------PSKNIIGRSVFRYWPPNR 780
            VLA IA+ L +   TFVA P  IPS SM PT       VGDR++ +K+SY F  P   D+++F+ PP    VGY                         D++  +KRV+A  G  V+ R    L VNG    E Y+       +P  Y     E  P  VP   V+VMGDNR +S DS    PL           P  N+IG++    WPP+R
Sbjct:   70 VLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWN-VGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSR 281          
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Match: LEPT_BACSU (Signal peptidase I T OS=Bacillus subtilis (strain 168) OX=224308 GN=sipT PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.694e-19
Identity = 60/197 (30.46%), Postives = 92/197 (46.70%), Query Frame = 1
Query:  235 RDAEKKEGPLPEWLNFTTDDAKTVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEDYILEPPAYEMK----------PTRVPENYVFVMGDNRNNSYDS-HVWGPLPSKNIIGRSVFRYWPPNRIAGT 792
            + A+KK     EW        K ++ A+ ++L  R F+ EP  +   SMYPT   G+RL   K   Y  +    DIVI          G +    ++KR++ K G+ V+++   L +NG +  E Y+ +      K          P +VP+   FVMGDNR NS DS +  G +    I+G S F ++P N +  T
Sbjct:   11 KTAKKKTNTYLEW-------GKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGELKRGDIVIIN--------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAEDRIVGTSKFVFFPFNEMRQT 192          
The following BLAST results are available for this feature:
BLAST of Phvul.002G312800.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PLSP1_ARATH3.352e-11866.92Chloroplast processing peptidase OS=Arabidopsis th... [more]
TPP2_ARATH1.343e-7562.22Probable thylakoidal processing peptidase 2, chlor... [more]
TPP1_ARATH1.903e-7458.51Thylakoidal processing peptidase 1, chloroplastic ... [more]
LEP1_SYNY33.601e-5350.85Probable signal peptidase I-1 OS=Synechocystis sp.... [more]
LEP_PHOLA5.924e-5247.59Signal peptidase I OS=Phormidium laminosum OX=3205... [more]
LEP2_SYNY32.256e-5043.41Probable signal peptidase I-2 OS=Synechocystis sp.... [more]
LEP_MYCLE1.091e-2132.89Probable signal peptidase I OS=Mycobacterium lepra... [more]
LEP_MYCTU1.136e-2134.74Signal peptidase I OS=Mycobacterium tuberculosis (... [more]
LEP_MYCTO1.136e-2134.74Signal peptidase I OS=Mycobacterium tuberculosis (... [more]
LEPT_BACSU6.694e-1930.46Signal peptidase I T OS=Bacillus subtilis (strain ... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 115..131
score: 46.5
coord: 218..237
score: 57.86
coord: 174..186
score: 47.99
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 100..258
e-value: 2.3E-39
score: 132.9
NoneNo IPR availableGENE3D2.10.109.10coord: 124..255
e-value: 8.0E-33
score: 114.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..89
NoneNo IPR availableCDDcd06530S26_SPase_Icoord: 118..250
e-value: 3.01317E-25
score: 94.1895
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 151..251
e-value: 7.4E-12
score: 45.2
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 124..131
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 223..236
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 113..262

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.002G312800.1_Pv_G19833_v2.1

>Phvul.002G312800.1_Pv_G19833_v2.1 ID=Phvul.002G312800.1_Pv_G19833_v2.1; Name=Phvul.002G312800.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=287bp
MTSLSVFPSLPLLQNPNFTNPRLSNFINFPFNSTRSFAPLSRRDFLCRAF
RDSSEDTKAVLKSDDSGGGDGGGDGGGDRDAEKKEGPLPEWLNFTTDDAK
TVLAAIAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPC
ASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVER
NEDYILEPPAYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPSKNIIGR
SVFRYWPPNRIAGTVSKDSCSIETTPENTETALPSQ*
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mRNA from alignment at Chr02:47975733..47978517-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.002G312800.1_Pv_G19833_v2.1 ID=Phvul.002G312800.1_Pv_G19833_v2.1; Name=Phvul.002G312800.1; organism=Phaseolus vulgaris; type=mRNA; length=2785bp; location=Sequence derived from: Chr02:47975733..47978517- (Phaseolus vulgaris
GTTGGTGTCTCAAACTGCAACTACAACCAAACAAGATGACTTCTCTCTCT GTTTTTCCCTCACTCCCATTGCTTCAAAACCCTAACTTCACTAATCCCCG TCTCTCTAATTTCATCAATTTCCCTTTCAATTCCACGCGTTCTTTCGCAC CACTCTCTCGCCGTGATTTCCTATGCAGAGCGTTCAGGGATTCCAGCGAG GACACCAAAGCGGTCCTCAAGTCCGACGACAGCGGCGGTGGAGACGGAGG CGGAGACGGTGGGGGTGACCGGGACGCGGAGAAAAAAGAAGGGCCTTTGC CGGAGTGGTTGAATTTCACTACTGATGACGCCAAAACGGTGCTTGCTGCT ATCGCAATTTCCCTTGCGTTTCGCACCTTCGTGGCGGAGCCTAGGTACAT TCCCTCGCTGTCAATGTACCCTACATTTGATGTTGGCGATCGACTTGTTG CTGAAAAGGTAGCCTTTTTGTTCCTTTACCTTCTTCTAATTTCAAAAGGG TGTTCAATTGTTCATGAACTTGCTATTAGCTGTGTATTTTCGATTAGGAC TGAAACTTTGACGATATTCAGCTCGGATTTGGCACTATTTACGGCAAGGA GAATGCTATTTGGAGATAAAGTGTACTGGTAATTAATGATTAAAGAAATC AATTGTTTAAACTTGAAAGTGTAATTAAACTCGAAGTTTGTGAAACATGT ATTTGATCTTGATCACAATCTGAAATTTAATTTTTTAAACGACGAATGCA AGTACACTTTATCCTCTGAAATTGTACTATTCTCACTTTAGAAGAGTCGG TTTAGTTGAAACATGATGAGACTGGCTCAATGTTGAAATTAACTACTCCA CCAATGAAAAGGAAAAAAGAGTCCAGACAACATCTTGTGTGTGTGGATAT GGCTATTCCCTTTTAATAGATTTTATCATCATCATCTGATTAGGCTTTCT GCTATGATTTATGGTGTGTCTGTATGTGAAGAGCTGAATATTCATCTTCA TGACAACTTCAGCTATTTGTTGGAAATTATAAGAATTTGGCGTTTTTCTA TAATGTGTGGAGAGTCTGTAAGGCTCTGGAAACATAAGAGTTGTAGTTTG TTTACTTCCTTTTTAAGACACTACTTTTCAAACCATTAACTGAATTTTTT TTTCATGAAATGTTTATAAGTGTCTTACCTTTGTGGGTTCTAGTGATTGA AATGTTGATTCTCTGAAATTTTTTGTAAAGTTTTTAACTATGTAAAACAT GGATCTAAAAATTTCTTGTTGTGAGACATATACTAGCTTATGGGGATTAC GGTAGACTTAATTGGTAAATTCCCAGTTTCTTTTTGTTTTGCTTAAACAG ATTATTTACCAACTTAGAAATTTGTAGATAATAGTTTTTTATTTTTTTAC TTGTTTGTACGTATTTGTTCTGATGACAAGTGTTTAATGTTGAATTTGAC TACTTCGCAAAATATATATGTACATGTAGGCTTGGATACTTGTGTTGTGA GGCAAAGTGTCAAATTTAGCTATAATAGATTTTAACATCAAGGTTCAGCT AGACTTACTTCGGCCATGATGCATCTCCATTGTAAAGATACATCTTCATT TTTCAGGTTTCTTACTATTTTAGAAAACCATGTGCAAGTGACATAGTGAT ATTTAAAAGTCCTCCAGTTCTTCAAGAAGTTGGATATAGTGACGACGATG TTTTTATAAAGCGTGTGGTTGCAAAGGAAGGTGATATTGTGGAGGTAAGA TCTTTTGAGAAGAGCATTGATAGTCTTATTTTGTGATGGTATTGTCTTTT GAGGATGTTACATTCATAGTCATGTTATCATTTGTTTGTCCATACCTTCA CTTTTCCACTTGGTTGGTTAGATAGTGGCTACTGGTTGTTATATGTAATT GGAACTTCAAAGTCTGCATGAATAGCATTTAGTAGCCATTTATAATTTAA GCTAGATTAATGGGGTGCTTGATTCAGCAGCTTAGGCTGAAATGTGAGCA ATTGAATTATTTGCAGGTCCGTAAAGGGCATCTTGTAGTTAATGGGGTTG AGAGGAATGAAGACTACATTCTTGAACCACCTGCATATGAGATGAAACCC ACAGTAAGTTATATATTTTAATATTCTGGTTCTGTTGTCTTTCTCTCCTC TATTGATCCTAAGGAACTACATAATTTGTTTTGTTTTGCAGCGAGTACCA GAAAACTACGTTTTTGTGATGGGTGACAACCGGAATAACAGCTATGATTC CCATGTGTGGTAATGATGTTTTTTAAGTATCCTGTCATACATTCATTCTT TTTACTATTATTTTCATATTTGATAATAATGTTGTGAATGGAATGTGATT TTGTTAGGGGTCCCCTGCCATCGAAGAACATCATAGGCAGATCAGTATTT CGGTATTGGCCACCAAATAGAATTGCTGGCACAGTTTCTAAGGACAGTTG CAGTATTGAGACCACGCCGGAGAATACAGAGACTGCTCTACCTTCTCAAT GACCACACTTGCCATCCATTAGTGTGGATAATGTAAAATATGCCAATTTT TGAGGTTAGTCTTAATCTTAGAAAAGAAAGAGAACGTTGCTAAGTTGGAA AAACATATTTATGTAAATGCTCATAATTTAGATGCAAACAAGATTTATTT AAACATAGTGCATCACAAACGTAACAAAAGAGCTTTCTAGGAATTTACTT TTCCTCTAGAGAACGATTGATTTGTATTACATTATAAAATGGCTTTATTA TTTATGAAATGATAAATTGTTTACGATTGTTATTG
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Coding sequence (CDS) from alignment at Chr02:47975733..47978517-

>Phvul.002G312800.1_Pv_G19833_v2.1 ID=Phvul.002G312800.1_Pv_G19833_v2.1; Name=Phvul.002G312800.1; organism=Phaseolus vulgaris; type=CDS; length=861bp; location=Sequence derived from: Chr02:47975733..47978517- (Phaseolus vulgaris
ATGACTTCTCTCTCTGTTTTTCCCTCACTCCCATTGCTTCAAAACCCTAA
CTTCACTAATCCCCGTCTCTCTAATTTCATCAATTTCCCTTTCAATTCCA
CGCGTTCTTTCGCACCACTCTCTCGCCGTGATTTCCTATGCAGAGCGTTC
AGGGATTCCAGCGAGGACACCAAAGCGGTCCTCAAGTCCGACGACAGCGG
CGGTGGAGACGGAGGCGGAGACGGTGGGGGTGACCGGGACGCGGAGAAAA
AAGAAGGGCCTTTGCCGGAGTGGTTGAATTTCACTACTGATGACGCCAAA
ACGGTGCTTGCTGCTATCGCAATTTCCCTTGCGTTTCGCACCTTCGTGGC
GGAGCCTAGGTACATTCCCTCGCTGTCAATGTACCCTACATTTGATGTTG
GCGATCGACTTGTTGCTGAAAAGGTTTCTTACTATTTTAGAAAACCATGT
GCAAGTGACATAGTGATATTTAAAAGTCCTCCAGTTCTTCAAGAAGTTGG
ATATAGTGACGACGATGTTTTTATAAAGCGTGTGGTTGCAAAGGAAGGTG
ATATTGTGGAGGTCCGTAAAGGGCATCTTGTAGTTAATGGGGTTGAGAGG
AATGAAGACTACATTCTTGAACCACCTGCATATGAGATGAAACCCACACG
AGTACCAGAAAACTACGTTTTTGTGATGGGTGACAACCGGAATAACAGCT
ATGATTCCCATGTGTGGGGTCCCCTGCCATCGAAGAACATCATAGGCAGA
TCAGTATTTCGGTATTGGCCACCAAATAGAATTGCTGGCACAGTTTCTAA
GGACAGTTGCAGTATTGAGACCACGCCGGAGAATACAGAGACTGCTCTAC
CTTCTCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR019758Pept_S26A_signal_pept_1_CS
IPR036286LexA/Signal_pep-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane