Phvul.003G083900.2

Transcript Overview
NamePhvul.003G083900.2
Unique NamePhvul.003G083900.2_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03supercontigChr03:14023227..14026885 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR202Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL021Pisum sativum Cameor genome v1aPisum sativum
pspvL336Pisum sativum Cameor genome v1aPisum sativum
pspvL348Pisum sativum Cameor genome v1aPisum sativum
pspvL354Pisum sativum Cameor genome v1aPisum sativum
pvvuR336Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR343Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR370Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0284Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL026Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL951Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL728Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0081Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0524Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0272Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0477Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0658Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0932Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL044Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL192Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR287Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR335Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR330Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR397Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR328Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR397Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR280Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR341Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR351Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR286Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR324Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR358Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR402Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR408Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL019Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL698Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL125Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL287Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL293Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL023Cicer arietinum
carpvL707Cicer arietinum
ccapvL176Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL748Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR364Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR373Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR451Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR361Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR428Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR373Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR381Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR374Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR450Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR442Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR306Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR337Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR316Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR341Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.003G083900Phvul.003G083900_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G083900.2Phvul.003G083900.2_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.003G083900.2_Pv_G19833_v2.1Phvul.003G083900.2_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G083900.2.v2.1.CDS.6Phvul.003G083900.2.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G083900.2.v2.1.CDS.5Phvul.003G083900.2.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G083900.2.v2.1.CDS.4Phvul.003G083900.2.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G083900.2.v2.1.CDS.3Phvul.003G083900.2.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G083900.2.v2.1.CDS.2Phvul.003G083900.2.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G083900.2.v2.1.CDS.1Phvul.003G083900.2.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G083900.2.v2.1.three_prime_UTR.1Phvul.003G083900.2.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G083900.2.v2.1.five_prime_UTR.1Phvul.003G083900.2.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
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BLAST of Phvul.003G083900.2 vs. DB:Swiss
Match: UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.005e-16
Identity = 34/69 (49.28%), Postives = 53/69 (76.81%), Query Frame = 1 
Query:  451 VSPLLQAVVGEPALPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFETDCTDMFKMNQLLAKHI 657
            +S  L +++GE  L RTE+VR+LWAYIK +NLQ+P NK++I+CD+ L L+     T+MF+M+++LA H+
Sbjct:  126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFEMHKILASHM 193

HSP 2 Score: 58.9214 bits (141), Expect = 6.688e-9
Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 1 
Query:  601 FETDCTDMFKMNQLLAKHIIPLGPTKESQAKRVKVDVETKIESAEPASSTV----------VISEALAKFLGTEGKEMQQSEANRLVWEYIKHHHLEDPLNAMVILCDAKLQELLGCESISALGIPEMLARH 966
            FE    D+ K N  LA  +       +  +   K D ETK    E    TV           +S++LA  LG    E+ ++E  R +W YIK H+L++P N   ILCD KL+ +LG +S +   + ++LA H
Sbjct:   64 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRKVTLSKSLASLLGEH--ELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASH 192
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BLAST of Phvul.003G083900.2 vs. DB:Swiss
Match: UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.263e-14
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 
Query:  433 LNKVCGVSPLLQAVVGEPALPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFETDCTDMFKMNQLLA 648
            LNK   +SP L   +G   L R + V++LW YIK ++LQDP +KR I+CDD L+ VFE D   MF MN+ L 
Sbjct:  117 LNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYLT 188
[Close]
BLAST of Phvul.003G083900.2 vs. DB:Swiss
Match: TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.266e-13
Identity = 32/75 (42.67%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  433 LNKVCGVSPLLQAVVGEPALPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFETDCTDMFKMNQLLAKHI 657
            + KV   +PL Q  +G   LPRT++V+ +W YIK+++LQ+P ++R+I+CD+ +  +F    T MF MN+LL KH+
Sbjct:  121 VRKVLLSAPL-QKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFSMNKLLTKHL 193

HSP 2 Score: 55.4546 bits (132), Expect = 1.200e-7
Identity = 24/72 (33.33%), Postives = 48/72 (66.67%), Query Frame = 1 
Query:  751 VVISEALAKFLGTEGKEMQQSEANRLVWEYIKHHHLEDPLNAMVILCDAKLQELLGCESISALGIPEMLARH 966
            V++S  L KFLG+E  E+ +++  +++W+YIK H L++P +   ILCD K++ + G + ++   + ++L +H
Sbjct:  124 VLLSAPLQKFLGSE--ELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKH 192
The following BLAST results are available for this feature:
BLAST of Phvul.003G083900.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
UAF30_YEAST8.005e-1649.28Upstream activation factor subunit UAF30 OS=Saccha... [more]
UAF30_SCHPO2.263e-1448.61Upstream activation factor subunit spp27 OS=Schizo... [more]
TRI1_YEAST7.266e-1342.67Protein TRI1 OS=Saccharomyces cerevisiae (strain A... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019835SWIB domainSMARTSM00151swib_2coord: 247..329
e-value: 4.4E-14
score: 62.8
coord: 145..224
e-value: 2.6E-45
score: 166.5
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10coord: 140..230
e-value: 1.4E-28
score: 100.6
coord: 242..333
e-value: 5.6E-20
score: 73.1
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 250..324
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 140..222
IPR014876DEK, C-terminalPFAMPF08766DEK_Ccoord: 2..56
e-value: 1.3E-15
score: 57.1
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 251..322
e-value: 8.5E-18
score: 64.0
coord: 149..219
e-value: 2.4E-26
score: 91.4
NoneNo IPR availableCDDcd10567SWIB-MDM2_likecoord: 149..219
e-value: 3.65331E-37
score: 125.734
NoneNo IPR availableCDDcd10567SWIB-MDM2_likecoord: 251..322
e-value: 3.0501E-20
score: 81.0505
NoneNo IPR availableSUPERFAMILY109715DEK C-terminal domaincoord: 3..56

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.003G083900.2_Pv_G19833_v2.1

>Phvul.003G083900.2_Pv_G19833_v2.1 ID=Phvul.003G083900.2_Pv_G19833_v2.1; Name=Phvul.003G083900.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=335bp
MVSDQDIAKGVESLLRHSDPNSITTVNAVVQQLEAKLGLDLSHKAAFIRD
QIDLLLRSHPPHAFLPHPPPLHKDYFAPHPQQHFPATHFPPHFALHDEIN
FQHPHPPPPCKVDPFPENAATVASPQAPKVSVQTGGKRRGGAGGLNKVCG
VSPLLQAVVGEPALPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLV
FETDCTDMFKMNQLLAKHIIPLGPTKESQAKRVKVDVETKIESAEPASST
VVISEALAKFLGTEGKEMQQSEANRLVWEYIKHHHLEDPLNAMVILCDAK
LQELLGCESISALGIPEMLARHHLFKQSDSNVSG*
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mRNA from alignment at Chr03:14023227..14026885-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.003G083900.2_Pv_G19833_v2.1 ID=Phvul.003G083900.2_Pv_G19833_v2.1; Name=Phvul.003G083900.2; organism=Phaseolus vulgaris; type=mRNA; length=3659bp; location=Sequence derived from: Chr03:14023227..14026885- (Phaseolus vulgaris
CAACTTTTCACTCTTTACGATTCTACCCTCAACCACTACCCCCTCTTATC
CACCCCCTCAAATTACGTTTCTACTCCTTTTCCCGGCTCTCATCACTCCT
ATCCTCGCCACTCACTGCAAAACCATTTTGAAATAAAGGGTACTTTTGTG
ATTTCGGTCTTATAAAGAGAGAGAGAAGAAGCAGAAGAGAGAAGGTATAA
CCAGCCGTTTTTTCTGTTGGTATATGAAGGTGGTGAAGGAAGAAGAACAA
GAATGGTGTCCGACCAGGATATAGCAAAAGGGGTGGAGTCTCTACTTCGT
CACTCTGACCCAAACTCCATAACCACTGTAAACGCCGTCGTACAGCAGCT
CGAGGCTAAACTAGGGTTAGACCTCTCTCACAAGGCTGCTTTCATCCGCG
ACCAGATCGACCTTCTTCTCCGCTCCCACCCACCACATGCATTTCTTCCT
CACCCTCCTCCTCTACACAAAGACTATTTTGCCCCTCACCCCCAACAGCA
CTTCCCAGCCACCCACTTTCCTCCCCATTTTGCCCTCCATGACGAGATCA
ACTTCCAGCACCCCCACCCTCCTCCTCCATGCAAAGTTGATCCCTTTCCT
GAAAATGCCGCCACTGTTGCCTCTCCTCAAGCGCCCAAAGTAAGGTGCGG
TTTTTCATAAGCCCTTTTGTTTTGCTCTTCAACTTCTTAACTGGGTCTTC
ATGGGGTGGGTTTGTTCTTGTCGCTTTAACTAATTAGATCTTAGTTCCGA
GGTATTTTTTTGTTTTCTTCGATTTAGGGTTAGTATTTTCCGCTTTCGCT
TTCGTCCGAAGTACGGTTGCGATCTTGGGTTGATCTCCTATTGTATGTAG
TTCGAGTACGCTTCCATTTCCGGAAACTCTTCATGGTTGGTTGGTTGTTG
TTAGTATTTTATTTATTGTTGGTTACTGTGGTTTCTTTCAATTGAAATTT
CACGCTATTTTTGGTAAAATAGTTGTAAACTTGTTCATGTCATGTCATTT
TCCGTTTGATGATTTTATTATGTTAAAATAATAATAATTTTGTTTATTAG
AAACATACCGGTCCCAAATACCTCTTTCTTTAACTATTGTGCTCTTCTAG
TCCTGTTTCTTAGCCTTCTCTTGCCCCTATTGTGTATTTATTCCCATTCC
ATTGACCTGGACGTGTGACAATTTCTTTGCTTAGTGTTATTTGTCGTTTT
TCAGAATTTTAAATGCATTTTTAATATAGTGTTCAAAACAGCTTATATAT
GTGTGTATGTTTTTTTTTCTTCATATATATACATAATAATCAGCGTTTGC
TAGCCCTGCTAATTTGTTTGGTCTCATGTTCTGATTAGCTTTGAATATGT
AATATTTTTTCTCCAATCTGTCTCTATTCTACTAAGAATGGCGTTATGGA
ATTAACATACGAGATGGTGTATTGCCGTTCTTTATAAATGATTTTCCAGT
GTTCAAACCGGAGGCAAAAGAAGAGGTGGTGCTGGTGGTCTAAACAAAGT
TTGTGGTGTTTCTCCTTTGCTTCAGGCAGTTGTTGGTGAGCCTGCATTGC
CAAGAACTGAGGTAGTTTTCTTTTACCAAACTAAGTTAGATACCTCACTT
CACTTTCATTGTAAAAGCATGAATCTTCATTTATCTGGAATAAACCATTA
ATTAAAATAAATCACATGGAACCCTTTGATATGCTCAATTCAGATTGTGA
GGCAGCTTTGGGCATACATAAAGAAAAACAACCTCCAGGATCCTGGTAAC
AAAAGGAAGATAATTTGTGATGATGCACTGCGTTTGGTATTTGAGACAGA
CTGCACTGACATGTTCAAGATGAATCAGCTGCTAGCTAAACACATTATCC
CACTTGGTCCCACAAGTAAGTACTAAATAGCGAGTGCCCTGTTTGGATAA
ACATGTGTCAAGAAAATAAGAAGGTAAAATGAATAAGTTTCTCCCATAAA
TTAAAAACAACTTATTCACTTCAACTTTGATGCAAGTTATTTCATTTAAC
TTTTCTAAAAGCTATTTATTTTACCTTCTTAAGTTGTTCTCCTATATTTG
CTTATTGAAAAATTTATCTTTCAGAACCCAAATAAAATGAGGATGCTACA
TTACCATCTTTTTTACAAGGGGTTTTGTTGTTTCTTTAGTAAAATAATCT
TAATATTCTTTCAATCCTATCACTCCAGAGGAGTCACAAGCTAAGCGAGT
GAAGGTGGACGTTGAAACAAAAATTGAAAGTGCTGAACCTGCTTCATCCA
CTGTCGTAATATCTGAAGCGCTTGCCAAATTTTTGGGTACTGAGGGAAAA
GAGATGCAACAATCTGAAGCCAACAGACTTGTTTGGGAGTACATCAAGCA
TCACCATTTGGAGGTGTGTTGCCTGTTCATCACATTCTCCACTCTTTCAC
ATGCTCAAACATGCTTCAACCTTCGGTTAAGAAATCAGTACTTAACATAA
AAGTATTTTTCTGATGGAAATTAAAAAGTTGCACGGACAATGAAAGATTC
TTGAAATCAAAATCTGATTGAAAGCTGAAAACTAAAAGAAATTGAAGAAA
ATGTCTTATATTCTATGATATTTGTTTCAAAAATTACTTTGGTGGGCTGT
TGCCTTTTTATTTTGAGCGATGGATCTAAACATAAAAGAGATTAATAACG
AGAAGGGATAATAATTGTTTGGTCTACAATTTGTCCATGTTAATTGTAGG
ATCCTTTAAATGCAATGGTGATACTATGTGATGCAAAGCTTCAAGAGCTA
CTTGGATGTGAAAGCATTTCTGCTCTAGGAATACCAGAGATGTTAGCGCG
CCATCATCTATTTAAGCAGTCTGATTCCAATGTAAGGTTAACATTTCCTT
TCATCTTATTATCTATTGTGCTCGTGTTTTTTTTTTTTTAATATCTCTGA
ATCATTTGGCCAGCAATCTTGTCATGTGGAAATCTCTCCTCAATTGTGTT
TTACCTCTATACAACACTTTGTAACTTGACTCTTGCTTCATTCCTACACT
ATTTAAGAGTTCGGCAATTTCTATACGAACTTGACCACTCTCCTTATGGC
CATTTTTTGTGTGTTTGAAACCGTGTTCCCCACTTGTGCAATATATAAAT
GTGTATATTTCCCTGCCTCTTCCTTTCCTGAGCTCCATGTCAACGTTCAT
GGGTTATTTTCTCACATTGTGACTTTTTAACGAGTCTTCTGTTAAATGGA
AATTGACTGACAAATGGTTTTCTGGTTTTTCTTTAATTGTGGTGCAGCGG
ATGATCTGCAGAGAGCCGTAGTTGTATGTTTGTGGCTGTTGGTAGATGAT
CATATAGGAACTTTTTACTTATTCCTGTAACTTCCTTAATCTGTTTGTTC
ATTGACATGCGTAAACTGAATGTTGTCTGACAGTTATTAGGTTCGTTGTT
TAGAATGACAATGGAGACCTTGAGCTAGGCAAGAAGTATATTATTGTATT
TAAGATATGGCCCTCTAGGTTGCCCCTGCATTTTATTTTATCAATTCTCA
TGTCTAACCTCAACTCACTGAAGGATCCTGAACTCCTATTTGGAATTACT
AATACTTTTGTACTTTGAGTTACATCAACTACTCTGAATCAATGCACCTA
CTTGTTCTGACAGCCTTGCACTTAATCCTATTTGAAGATGCATGATTACA
AGTATAAGC
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Coding sequence (CDS) from alignment at Chr03:14023227..14026885-

>Phvul.003G083900.2_Pv_G19833_v2.1 ID=Phvul.003G083900.2_Pv_G19833_v2.1; Name=Phvul.003G083900.2; organism=Phaseolus vulgaris; type=CDS; length=1005bp; location=Sequence derived from: Chr03:14023227..14026885- (Phaseolus vulgaris
ATGGTGTCCGACCAGGATATAGCAAAAGGGGTGGAGTCTCTACTTCGTCA
CTCTGACCCAAACTCCATAACCACTGTAAACGCCGTCGTACAGCAGCTCG
AGGCTAAACTAGGGTTAGACCTCTCTCACAAGGCTGCTTTCATCCGCGAC
CAGATCGACCTTCTTCTCCGCTCCCACCCACCACATGCATTTCTTCCTCA
CCCTCCTCCTCTACACAAAGACTATTTTGCCCCTCACCCCCAACAGCACT
TCCCAGCCACCCACTTTCCTCCCCATTTTGCCCTCCATGACGAGATCAAC
TTCCAGCACCCCCACCCTCCTCCTCCATGCAAAGTTGATCCCTTTCCTGA
AAATGCCGCCACTGTTGCCTCTCCTCAAGCGCCCAAAGTAAGTGTTCAAA
CCGGAGGCAAAAGAAGAGGTGGTGCTGGTGGTCTAAACAAAGTTTGTGGT
GTTTCTCCTTTGCTTCAGGCAGTTGTTGGTGAGCCTGCATTGCCAAGAAC
TGAGATTGTGAGGCAGCTTTGGGCATACATAAAGAAAAACAACCTCCAGG
ATCCTGGTAACAAAAGGAAGATAATTTGTGATGATGCACTGCGTTTGGTA
TTTGAGACAGACTGCACTGACATGTTCAAGATGAATCAGCTGCTAGCTAA
ACACATTATCCCACTTGGTCCCACAAAGGAGTCACAAGCTAAGCGAGTGA
AGGTGGACGTTGAAACAAAAATTGAAAGTGCTGAACCTGCTTCATCCACT
GTCGTAATATCTGAAGCGCTTGCCAAATTTTTGGGTACTGAGGGAAAAGA
GATGCAACAATCTGAAGCCAACAGACTTGTTTGGGAGTACATCAAGCATC
ACCATTTGGAGGATCCTTTAAATGCAATGGTGATACTATGTGATGCAAAG
CTTCAAGAGCTACTTGGATGTGAAAGCATTTCTGCTCTAGGAATACCAGA
GATGTTAGCGCGCCATCATCTATTTAAGCAGTCTGATTCCAATGTAAGCG
GATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019835SWIB_domain
IPR036885SWIB_MDM2_dom_sf
IPR014876DEK_C
IPR003121SWIB_MDM2_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding