Phvul.003G207900.1

Transcript Overview
NamePhvul.003G207900.1
Unique NamePhvul.003G207900.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03supercontigChr03:43381010..43385746 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR221Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL315Pisum sativum Cameor genome v1aPisum sativum
pspvL321Pisum sativum Cameor genome v1aPisum sativum
pspvL337Pisum sativum Cameor genome v1aPisum sativum
pspvL357Pisum sativum Cameor genome v1aPisum sativum
pvvuR339Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR384Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0579Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL513Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL0926Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0971Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL839Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL451Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL664Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0451Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1195Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0039Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0053Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0275Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0372Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL057Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL609Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR317Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR357Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR359Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR392Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR356Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR393Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR325Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR333Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR341Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR406Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR449Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL427Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL589Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL439Cicer arietinum
carpvL689Cicer arietinum
ccapvL190Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL374Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR369Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR429Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR338Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR413Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR377Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR370Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR429Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR417Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR305Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR362Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR312Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR354Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.02G230100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.02G158400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.4g115800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat4g064560.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_05764.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va04G019720.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_26920.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058931768.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cr_19978.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014643140.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.2g087760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_12609.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_21076.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr09.74.1.62122bf8Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr03.2210.1.6211317cVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan01g227900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g098600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_07413Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_011562Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.2g071800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058907354.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_02G01782.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_08786Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.01G394600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun03g316600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_31440Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014654669.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun03g316600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg18579.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg52811.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g150920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_01G02956.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun09g098600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va01G082020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_031772Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.01G271600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat05G0406800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan04g072300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat04G0198800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004501773.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr09.1001012Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.009G169600.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr03.1242Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.003G207900Phvul.003G207900_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G207900.1Phvul.003G207900.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.003G207900.1_Pv_G19833_v2.1Phvul.003G207900.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G207900.1.v2.1.five_prime_UTR.1Phvul.003G207900.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G207900.1.v2.1.CDS.1Phvul.003G207900.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G207900.1.v2.1.CDS.2Phvul.003G207900.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G207900.1.v2.1.CDS.3Phvul.003G207900.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G207900.1.v2.1.CDS.4Phvul.003G207900.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G207900.1.v2.1.CDS.5Phvul.003G207900.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G207900.1.v2.1.CDS.6Phvul.003G207900.1.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G207900.1.v2.1.three_prime_UTR.1Phvul.003G207900.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana OX=3702 GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 379.022 bits (972), Expect = 1.013e-126
Identity = 192/352 (54.55%), Postives = 253/352 (71.88%), Query Frame = 1
Query:  394 MTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGN-GGPISLQGVAXXXXXXXXXXXXLNEA--SPFVPMMLSPTQGVSTQSSDWNGYQAS-VYLPERNMHPPSTFVLNNPAVDTNVYLHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSGLGDQSYSNSASVEVAGIGESTGETDA 1437
            M   YP+RP++EDC+FYM+TG+CK+G +CKFNHP+RRK Q  +E+  E +E  +     ECKYY R+GGCK+G+SC+++H +      +PA V ELNFLGLPIR GE+ECP+YMR GSCKFG++CKFNHPDPTA+GG + P   GN GG  S +  ++ S  SWSS R +N    +PF+P M   ++GV+ Q+SDWNGYQAS  Y PER+   PS++ +NN   +T+ +  +Q QMSVEEFPERP +PEC+Y+LKTGDCKFK  CK+HHPKNR+ +    + +DKGLPLRPDQS+C+HYSRYGICKFGPAC+FDH I   P   S       S+S +VE   +G +  E D+
Sbjct:   94 MMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMK---EHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSI---PPTFSP------SSSQTVEARQVGANGNEDDS 433          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.046e-126
Identity = 188/316 (59.49%), Postives = 241/316 (76.27%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKE-KTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGNGG----PISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPST-FVLNNPAVDTNVYL-HHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPI 1332
            YP+RP AEDC+FYM+TG+CKFG +CKFNHP+ RK Q  ++ K  E E+   +    +CKYY R+GGCK+G++C++NHT  K S  A AP  ELNFLGLP+R GE ECPYYMR GSCK+GA CKFNHPDPT +GG + PS  GN G      S +   + S  SWSSPR +N  SPF+P+MLS T GV++Q+ +WNGYQASVY  ER +  PST +++NN + +T++ L  ++ QM  EEFPERP +PECSY++KTGDCKFK NCK+HHPKNR+ +LPP  L+DKGLPLRPDQ++C++YSRYGICKFGPAC+FDH +
Sbjct:  107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPK-SGLASAP--ELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSV 419          

HSP 2 Score: 72.0182 bits (175), Expect = 3.043e-12
Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHT-RGKFSTTAPAPVFE 678
            +P RP+  +C++YMKTG+CKF FNCK++HP  R  +       +   P  R     C YY R G CKFG +C+++H+ +  +ST +   + E
Sbjct:  343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPL-RPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVE 433          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 1.764e-70
Identity = 147/354 (41.53%), Postives = 186/354 (52.54%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPT----AVGGCEPPSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVS----TQSSDWNGYQASV-----------------YLPERNMHPPST----FVLNNPAVDTNVYLHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPIN--LQPLMMSGLGDQS 1374
            YP R    DC++YM+TG C+FG  CKFNHP  RK  AV     +GE P  R    EC+YY ++G CKFG +CK++H R K    A A   +LN LG P+R  E+EC YY+RTG CKFG+ CKF+HP P+    AV G     G     P S             S  +   ASP  P   S  Q +      Q   WN Y A +                 Y   R+   P+        +  A    + L+  ++ S+  FPERP +PEC +++KTGDCKF + CKFHHPK RI   P C LS  GLPLRP + +C+ YSRYGICKFGP CKFDHP+   +  L  S  GD S
Sbjct:   53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRK-MAVAAARMKGEYP-QRIGQPECQYYLKTGTCKFGATCKFHHPREK---AAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSP-SQHTYPGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESI--FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSPTGDVS 398          

HSP 2 Score: 77.7962 bits (190), Expect = 4.083e-14
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 1087 MSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHP 1329
            M    +PER GEP+CSY+++TG C+F   CKF+HP +R   +    +  +  P R  Q  C +Y + G CKFG  CKF HP
Sbjct:   48 MEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE-YPQRIGQPECQYYLKTGTCKFGATCKFHHP 127          

HSP 3 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1
Query:  388 SDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNH 633
            + M   YP R    +C +Y+KTG CKFG  CKF+HP  +   A + +      P  R +  EC YY R+G CKFG +CK++H
Sbjct:   92 ARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPL-RPNEKECAYYLRTGQCKFGSTCKFHH 172          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.834e-68
Identity = 144/366 (39.34%), Postives = 188/366 (51.37%), Query Frame = 1
Query:  397 THHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGY--QASVYLPE--------RNMHPPSTF----------VLNNPAVDTNVYLHHQKQMSVEE-FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSGLGDQSYSNSASVEVAGIGESTGET 1431
            T  YP RP   DC++Y++TG C+FG  C+FNHP R +   +      GE P +R    EC+YY ++G CKFG +CK++H R K      A    LN LG P+R  E +C Y++RTG CKFG  CKFNHP P       P SG     P S             S    + AS  +P  + P QG       WN Y  Q     P         RN+    T              NP   ++V L     +  E  FPERPG+PEC +++KTGDCKF + CKFHHP++R A  P C LS  GLPLRP + +C  Y+RYGICKFGP+CKFDHP+ +           +Y N+AS     +  STG++
Sbjct:   34 TGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHP-RDRELVIATARMRGEYP-ERIGQPECEYYLKTGTCKFGVTCKFHHPRNK---AGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSG-QQSYPWSRASFIASPRWQDPS----SYASLIMPQGVVPVQG-------WNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPG--SSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRV----------FTYDNTASETDEVVETSTGKS 370          

HSP 2 Score: 84.3445 bits (207), Expect = 2.926e-16
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 1069 LHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPIN 1335
            L   + M    +PERPGEP+CSY+++TG C+F S C+F+HP++R   +    +  +  P R  Q  C +Y + G CKFG  CKF HP N
Sbjct:   26 LSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE-YPERIGQPECEYYLKTGTCKFGVTCKFHHPRN 113          

HSP 3 Score: 83.9593 bits (206), Expect = 3.325e-16
Identity = 79/289 (27.34%), Postives = 113/289 (39.10%), Query Frame = 1
Query:  385 NSDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAV----GGCEPPSGF----GNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQ-GVSTQSSDWNGYQASVYLPERNMHPPSTFVLN--NPAVDTNVYLHHQKQ---------MSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHP 1191
             + M   YP R    +C +Y+KTG CKFG  CKF+HP  +   A +        P  RS+  +C Y+ R+G CKFG +CK+NH +       P P   +    +P   G++  P+        F A+ ++  P   A      G  P  G+    G  G +S  G                E+        S    G S     +         PER   P   F +   +    T    HH +          +S    P RPGEP C ++ + G CKF  +CKF HP
Sbjct:   75 TARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPL-RSNEVDCAYFLRTGHCKFGGTCKFNHPQ-------PQPTNMM----VPT-SGQQSYPW----SRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.167e-65
Identity = 130/302 (43.05%), Postives = 176/302 (58.28%), Query Frame = 1
Query:  502 RKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGNGGPIS--LQGVAXXXXXXX-XXXXXLNE-------ASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVLNNPAVDTNVYLHH------QKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSG 1359
            ++ +  KEK  E    ++ SS  ECKYY   GGCKFGK+CKY H  GK   T  A   +LNFLGLP+R GE+ECPYYMRTGSCK+  NCKF+HPDP+ V   +P     NG      +QG +     S     R++NE        SP     + P QG+     +WNGY     +P    +PP     + PA   N  ++        +Q+  EE+PERPG+PEC +F+K+G CKF+  CK+HHP++ +   P   LS  GLP++PDQ VC++Y RYG+CKFGPAC ++HP N  P+  +G
Sbjct:  221 KELKVAKEKRKEFI--SEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTD-AEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYP-PPEWNGYHQ---VPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVP--PAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAG 513          

HSP 2 Score: 75.0998 bits (183), Expect = 4.618e-13
Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query:  484 FNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHP 783
             NHP+ +  +    +    EE  +R    EC+++ +SG CKF   CKY+H R         P   L+ LGLPI+  +  C YY R G CKFG  C +NHP
Sbjct:  409 INHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVP-----PAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHP 503          

HSP 3 Score: 55.0694 bits (131), Expect = 9.068e-7
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 1
Query:  397 THHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNH 633
            +  YP RP   +C  ++K+G CKF   CK++HP R         +  G     +     C YY R G CKFG +C YNH
Sbjct:  427 SEEYPERPGQPECQHFVKSGFCKFRMKCKYHHP-RSPVPPAGALSPLGL--PIKPDQPVCTYYGRYGVCKFGPACAYNH 502          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 3.818e-64
Identity = 128/335 (38.21%), Postives = 173/335 (51.64%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDP----------TAVGGCEPPSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTF------VLNNPAVDTNVYLHHQKQMSV--------EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINL 1338
            YP  P   DC++Y++TG C+FG  C+FNHP  RK  A+     +GE P +R    EC+YY ++G CKFG +C+++H + K      A    LN LG P+R  E E  YY+RTG CKFG  CKF+HP P          T     + P+  G        G+   S  S+         S + P++L P   VS       G Q     P++ M    T+       L N  +      +    + V          FPERP +PEC +++KTGDCKF + C+FHHP+ R    P C LS  GLPLRP + +C  YSRYGICKFGP+CKFDHP+ +
Sbjct:   27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKL-AIATARMKGEFP-ERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGV---AGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQS--YAAGITNWSSSSYVPSPRWQGPSSYAPLIL-PQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGI 353          

HSP 2 Score: 93.9745 bits (232), Expect = 1.927e-19
Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 1099 EFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQP--LMMSGLGDQSYSNSASVEVAG 1407
            EFPER G+PEC Y+LKTG CKF + C+FHHPK++        L+  G PLRP++S  ++Y R G CKFG  CKF HP   QP  +++S  G   Y    S    G
Sbjct:   71 EFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHP---QPSNMVLSMRGSTVYPTVQSPTTPG 172          

HSP 3 Score: 80.1073 bits (196), Expect = 7.767e-15
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 1069 LHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHP 1329
            L   + M    +PE PGEP+CSY+++TG C+F + C+F+HP NR   +    +  +  P R  Q  C +Y + G CKFG  C+F HP
Sbjct:   16 LRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE-FPERLGQPECQYYLKTGTCKFGATCRFHHP 101          

HSP 4 Score: 74.7146 bits (182), Expect = 3.765e-13
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQA---VKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPV 672
            +P RP+  +C FYMKTG+CKFG  C+F+HP  R+  A   V    G    P +      C +Y R G CKFG SCK++H  G F+    +P+
Sbjct:  275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGE----PLCVFYSRYGICKFGPSCKFDHPMGIFTYNVASPL 362          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=At3g06410 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 7.994e-64
Identity = 126/335 (37.61%), Postives = 175/335 (52.24%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGG------------------CEPPSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGYQASV-YLPERNMHP----PSTFVLNNPAVDTNVYLHHQKQM-----SVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDH 1326
            YP RP+  DC +Y++TG C +G  C+FNHP R +   +    GE     +R     C+++ R+G CKFG SCKY+H R      + APV  L++LG P+R GE+EC YY+RTG CKFG  C+FNHP P AV G                    P     +       G+        +     +   P  PM+L P        S WN YQAS+  +P     P     S + L   +     Y    + +     + +EFP+RP +PEC YF++TGDCKF S+C++HHP + +       LS  GLPLRP  + C+H++++GICKFGPACKFDH
Sbjct:   51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHP-RDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPV-SLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGP--PMVLPPGM---VPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378          

HSP 2 Score: 87.0409 bits (214), Expect = 4.776e-17
Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 1102 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIA--RLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINL 1338
             PER G P C +F++TG CKF ++CK+HHP+       + P +LS  G PLRP +  CS+Y R G CKFG  C+F+HP+ L
Sbjct:   97 LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPL 177          

HSP 3 Score: 83.5741 bits (205), Expect = 6.024e-16
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 1096 EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPI------NLQPLMMSGLG 1365
            E +PERP EP+C Y+L+TG C + S C+F+HP++R A +         LP R    VC H+ R G CKFG +CK+ HP       ++ P+ +S LG
Sbjct:   49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLG 144          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.965e-63
Identity = 133/341 (39.00%), Postives = 176/341 (51.61%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSP----------TQGVSTQSSDWNGYQASV--YLPERNMHPPSTF--------------------VLNNPAVDTNVYLHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPI 1332
            YP R    DC++YM+TG C+FG  CKFNHP  RK  AV      GE P  R    EC+YY ++G CKFG +CK++H R K    A A   +LN LG P+R  E+EC YY+RTG CKF + CKF+HP P+        S +  G   +  G  + + P   +  +L+ ++ F+     P           QG+  Q   WN Y A +    P+     P T                          +V   VY    + +  E     P +PEC +++KTGDCKF + CKFHHPK R+   P C L+  GLPLRP + VC+ YSRYGICKFGP CKFDHP+
Sbjct:   63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKL-AVAAARMNGEYPY-RVGQPECQYYLKTGTCKFGATCKFHHPREK---AALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPG--QHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQVIVPQGL-VQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPER----PDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPM 391          

HSP 2 Score: 83.9593 bits (206), Expect = 4.897e-16
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  553 DRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGG 804
            +R    EC++Y ++G CKFG  CK++H + +     PAP   LN LGLP+R GE  C +Y R G CKFG NCKF+HP  T + G
Sbjct:  317 ERPDQPECQFYMKTGDCKFGAVCKFHHPKERL---VPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYG 397          

HSP 3 Score: 80.4925 bits (197), Expect = 7.274e-15
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 1087 MSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHP 1329
            M    +PER GEP+CSY+++TG C+F   CKF+HP NR   +    ++ +  P R  Q  C +Y + G CKFG  CKF HP
Sbjct:   58 MESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 137          

HSP 4 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 1
Query:  388 SDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNH 633
            + M   YP R    +C +Y+KTG CKFG  CKF+HP  +   A + +      P  R +  EC YY R+G CKF  +CK++H
Sbjct:  102 ARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPM-RPNEKECAYYLRTGQCKFASTCKFHH 182          

HSP 5 Score: 70.0922 bits (170), Expect = 1.275e-11
Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKF---STTAP 663
            +P RP+  +C FYMKTG+CKFG  CKF+HP  R   A          P  R     C +Y R G CKFG +CK++H  G     S T+P
Sbjct:  315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPL-RPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSP 402          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.934e-63
Identity = 134/351 (38.18%), Postives = 180/351 (51.28%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPD-----PTAVGGCEPPS--GFGNGGPISLQGVAXXXXXXXXXXXXLNEASP--FVPMMLSPTQGVSTQSSDWNGYQAS---VYLPERNMHPPSTFVLNNPAVDTNVYLHHQKQMSVEE----------------FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSGLGDQS 1374
            YP R    DC +Y++TG C+FG +C+FNHP  R   A+     +GE P +R    EC+YY ++G CKFG +CK++H R K      A   +LN LG P+R  E+EC YY++TG CK+G  CKF+HP+      ++ G    PS       GP     +A  + P  S   S    +P  + PM++   QG+  Q   WN Y      V   E  +  P        +   +    +Q  +S                   FPERP +PEC Y++KTGDCKF + CKFHHP+ R    P C LS  GLPLRP + +C  YSRYGICKFG  CKFDHP    P+ +   G  S
Sbjct:   77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNL-AIASARMKGEYP-ERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGI---AGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGL-VQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYGSAS 419          

HSP 2 Score: 93.2041 bits (230), Expect = 3.568e-19
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1099 EFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLMMSGLGDQSYSNSASVEVAG 1407
            E+PER G+PEC Y+LKTG CKF   CKFHHP+ +        L+  G PLRP +  C++Y + G CK+G  CKF HP  L   M S  G   Y +  S   AG
Sbjct:  121 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHP-ELFNAMASSRGSPIYPSVHSSATAG 222          

HSP 3 Score: 68.5514 bits (166), Expect = 4.219e-11
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query:  385 NSDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNH 633
            ++ M   YP R    +C +Y+KTG CKFG  CKF+HP  +   A + +      P  R S  EC YY ++G CK+G +CK++H
Sbjct:  115 SARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPL-RPSEKECAYYLKTGQCKYGNTCKFHH 196          
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana OX=3702 GN=At2g47850 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.774e-62
Identity = 130/337 (38.58%), Postives = 176/337 (52.23%), Query Frame = 1
Query:  406 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPI-RRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCEPPSGFGN-------------GGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGYQASV----------YLPERNMHPPSTFVLNNPAVDTNVYLHHQKQMSV----EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPI 1332
            YP RP A DCA+YM+TG C +G  C++NHP  R   +A    TG+  E   R     C++Y ++G CKFG SCK++H +    + +  P   LN  G P+R+G+ EC YY++TG CKFG  CKF+HP P       PP+                 GGP S   VAR  +P      +      + PM+L+P  GV      W+ Y A V           +   +++  +      P++   VY        V    + FPERPGEPEC Y+LKTGDCKF ++CKFHHP++R+     C LS  GLPLRP    C+ Y + G CKFG  CKFDHP+
Sbjct:   42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPE---RFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVP---LNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGA------YGPMLLTP--GV-VPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLP-GVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 362          

HSP 2 Score: 88.1965 bits (217), Expect = 2.341e-17
Identity = 55/150 (36.67%), Postives = 74/150 (49.33%), Query Frame = 1
Query:  952 STQSSDWN------GYQASVY--------LPERNMHPPSTFVLNNPAVDTN---VYLHHQKQMSVE-------EFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHP 1329
            S Q+ DW       G Q S++         PER   P   + +            Y H + + SVE       ++PER GEP C ++LKTG CKF ++CKFHHPKN    +    L+  G P+R   + CS+Y + G CKFG  CKF HP
Sbjct:   13 SAQAPDWTPADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 162          

HSP 3 Score: 83.1889 bits (204), Expect = 8.313e-16
Identity = 89/323 (27.55%), Postives = 117/323 (36.22%), Query Frame = 1
Query:  379 ERNSDMTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGGCKFGKSCKYNHTRGKFSTTAPAPVFELNFLG-----LPIRQG----ERECPYYMRTGSCKFGA-NCKFNHPDPTAVGGCEP----------PSGFGNGGPISLQGVAXXXXXXXXXXXXLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVLNNP--AVDTNVYLHHQKQ---------MSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRP 1254
            E     T  YP R     C FY+KTG CKFG +CKF+HP                 P  R    EC YY ++G CKFG +CK++H +   +T  P P     F       +P + G           +  GS   GA       P    + G  P          P      G  SL GV             L   +P +P +        + SS     Q     PER   P   + L        T+   HH +          +S    P RPG   C+++++ G CKF S CKF HP   I R  P   S    P+ P
Sbjct:   78 EATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPV-REGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVT-----------QLTSTTPSLPGVY------PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTI-RYNPSASSLADAPVAP 381          

HSP 4 Score: 71.633 bits (174), Expect = 4.789e-12
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1087 MSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPIN 1335
            +  + +PERPG P+C+Y+++TG C + + C+++HP++R A +     +    P R  +  C  Y + G CKFG +CKF HP N
Sbjct:   37 LGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR-ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKN 118          
The following BLAST results are available for this feature:
BLAST of Phvul.003G207900.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
C3H67_ARATH1.013e-12654.55Zinc finger CCCH domain-containing protein 67 OS=A... [more]
C3H43_ARATH1.046e-12659.49Zinc finger CCCH domain-containing protein 43 OS=A... [more]
C3H63_ORYSJ1.764e-7041.53Zinc finger CCCH domain-containing protein 63 OS=O... [more]
C3H33_ARATH1.834e-6839.34Zinc finger CCCH domain-containing protein 33 OS=A... [more]
C3H65_ORYSJ2.167e-6543.05Zinc finger CCCH domain-containing protein 65 OS=O... [more]
ZFNL_PEA3.818e-6438.21Zinc finger CCCH domain-containing protein ZFN-lik... [more]
C3H34_ARATH7.994e-6437.61Zinc finger CCCH domain-containing protein 34 OS=A... [more]
C3H66_ORYSJ2.965e-6339.00Zinc finger CCCH domain-containing protein 66 OS=O... [more]
C3H12_ORYSJ3.934e-6338.18Zinc finger CCCH domain-containing protein 12 OS=O... [more]
C3H32_ARATH1.774e-6238.58Zinc finger CCCH domain-containing protein 32 OS=A... [more]
back to top
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 235..262
e-value: 1.3E-6
score: 38.0
coord: 139..166
e-value: 1.5E-4
score: 31.1
coord: 371..398
e-value: 2.1E-4
score: 30.6
coord: 417..444
e-value: 2.0E-4
score: 30.7
coord: 186..213
e-value: 8.8E-5
score: 31.9
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 143..165
e-value: 5.8E-8
score: 32.5
coord: 419..443
e-value: 7.7E-9
score: 35.3
coord: 373..398
e-value: 6.6E-7
score: 29.1
coord: 189..211
e-value: 3.0E-7
score: 30.2
coord: 237..261
e-value: 5.0E-11
score: 42.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 417..445
score: 14.577
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 235..263
score: 15.77
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 371..399
score: 14.061
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 186..214
score: 14.389
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 139..167
score: 14.211
NoneNo IPR availableGENE3D2.30.30.1190coord: 111..177
e-value: 7.0E-9
score: 37.7
coord: 341..407
e-value: 6.5E-7
score: 31.4
NoneNo IPR availableGENE3D4.10.1000.10coord: 416..463
e-value: 4.3E-5
score: 25.4
coord: 180..268
e-value: 1.6E-16
score: 62.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..85
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 415..443
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 188..215
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 238..262
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 376..400
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 138..167

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.003G207900.1_Pv_G19833_v2.1

>Phvul.003G207900.1_Pv_G19833_v2.1 ID=Phvul.003G207900.1_Pv_G19833_v2.1; Name=Phvul.003G207900.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=486bp
MEGSESDSAPLSISNGEDPQLGASSPPPPPPPPSDLNHAVEHETLSGELQ
SKLDLKGEDESEDKVSDLNDGGGVCDEETAKGDGDSRGSETNSWNEEVGV
DVDVDADEDEDEDDVGVGDDGVETKEERNSDMTHHYPLRPEAEDCAFYMK
TGNCKFGFNCKFNHPIRRKTQAVKEKTGEGEEPTDRSSTTECKYYQRSGG
CKFGKSCKYNHTRGKFSTTAPAPVFELNFLGLPIRQGERECPYYMRTGSC
KFGANCKFNHPDPTAVGGCEPPSGFGNGGPISLQGVARPSVPSWSSPRSL
NEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVLNNPA
VDTNVYLHHQKQMSVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNR
IARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPLM
MSGLGDQSYSNSASVEVAGIGESTGETDATIQQSV*
back to top

mRNA from alignment at Chr03:43381010..43385746+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.003G207900.1_Pv_G19833_v2.1 ID=Phvul.003G207900.1_Pv_G19833_v2.1; Name=Phvul.003G207900.1; organism=Phaseolus vulgaris; type=mRNA; length=4737bp; location=Sequence derived from: Chr03:43381010..43385746+ (Phaseolus vulgaris
AGAAGATAGTGTGGTTTCCAAAACAGTACACAGAACATCAACATTAGAAA GTAGGACACTTTTTCTTTCTCTTTTTATGTTCACACTCACTTCGTTCACT CACACTGCTTCTGGTTTTTGATTCCCCTCATATAAAAACGCAACCTTTTT CCTCCTCCTTTCTCTTCTGCTCACTCCGTGCGTCTTATTCCCCTTTTCTT CTCTTTTGAACAAAAACCACCTTCTGTTATTAGGGTTTGAAATGTGGAGG GAGAATGGAAGGCTCTGAATCCGATTCTGCGCCACTTTCCATTTCCAATG GCGAAGATCCCCAATTGGGGGCTTCTTCCCCCCCTCCTCCTCCTCCTCCA CCGTCAGATCTTAATCACGCGGTGGAGCATGAGACACTCTCTGGGGAGCT TCAGAGCAAGTTGGATTTGAAGGGTGAGGATGAAAGTGAGGACAAAGTTT CCGACTTGAACGACGGTGGAGGAGTTTGCGACGAAGAAACTGCTAAGGGT GATGGAGATAGTAGGGGTTCGGAGACAAATAGTTGGAATGAGGAAGTGGG TGTTGATGTTGATGTTGATGCTGATGAAGATGAAGATGAAGATGATGTTG GTGTTGGTGATGATGGAGTGGAGACGAAGGAAGAGAGAAACAGTGATATG ACTCACCACTATCCTTTGAGGCCTGAAGCTGAGGATTGTGCATTTTATAT GAAAACTGGGAATTGCAAGTTTGGGTTTAACTGCAAGTTTAATCACCCTA TTAGGAGGAAAACCCAGGTACTTCTTGTGTCTTTCTTCTCCTTTGTATTC CTCTTTTAGATGCTATGCTTGTTAGTGATGCTATTGTTTTTGTATGGTAT GTTTGTTTGCATTGATATCTGTTAGTGATCAATATTGCATTGTTGGAGGT TAAGCTTTAGAACAATTCACTTGTGTAAAGGTTATCTTTTCTCCGAGGTT TCCTTTACGGTGACATTGTGTTATTTGTGGTGCTGGATTGAGAACAAGAG TAGTTTGCCTTTGCTGAAGGTATACTTTTGATTGGAGGGACTAGTAAATG GTCAGAACTGTTACATCATGGCTAGTAGGTACTTGATATTGAACTGTCAT TTTTGGAGGAAGTGCTATTTTTGGTAATTTGCTTTTATGATTTTATAATG TGTCTGTTTTGGTCGGCCTTTTTACTCTATAGCATTGCTAAAAGGACTTA TTAAGGCTTCAAAATTTTCCTATTTTTGTGAGGTCTCCTTTATTACCTCT TCAGACTTAGTAAGGTGTTGGTGATTGAGTATATCAATATATCAATGAGG TTCTCTTCACCATTTTATGCATGGAAACTTATTATACAATGTTCACTTCT TTAAAATGCTGTTATCTGTGTTGATGTTTTAACGATCAACAAAGGCTGTT AAAGAGAAGACGGGAGAAGGAGAAGAACCCACAGACAGATCAAGCACAAC AGAATGCAAGGTTATTGTCACAATTATGCTTCCAAGCAAATTTTAGTTTT CATGTCTGTCATTTCAGCATATTACCATTTTGGCTTCAATGTTCATATTG TAATAATTTAAATACAAGTTCCTCCAGCTATTTGAATTGCCAAGGGAGGT TGTGTGTAAGTCACTGTAAGGTCTATTCAAGGTGATTCAACCTAATTTTT AATTTATATTTTTCATTTCCTTCCGTGACATTGAGATCATTGATCATTTA TATGCTATATGTTCAATTTTGGGTGATGTGATATTCTGTCATTTCTAGAC TTGTGGGATGTGAGTTTGGCAAAGTAATGTAAATAGATTGTATTCTATAT TATAATTTTTTATCAATAAATATTTTCTGTGGCTGAGAATTAAAATATGT CTGTTTTGATTACTTGTGTTTGGATCGTAGTGATCTATGCTACTTAATAG TTTACATTAGACATGGATAGGGAGAACAGTGAAATATCTGTTAGGATGGT TGGTTTATTTTTGTGGCATTTTTGTTGATTTACCTTTCTGTTTTGCTTTA TCATACCCTAGCAAGGATAATGATGACAATGATATTAATTTTATTAAAAT GAATGGATAAAATAATTACAAGTAAATGATATCAATTGTTCGGTTGAAAA AATTATTGGAAGAAACAATGTATGGAGAAAAGAAGTTTGTATATGATTTT TTCTCTTTCTCAATCCATGTAAAACCAGCAAATATCACTATTCATGACAT GTTCATAACAACTTCTTTCCTGATCTTTATGGCAGTATTATCAAAGATCT GGGGGTTGTAAGTTTGGAAAATCTTGTAAATATAACCACACAAGAGGAAA ATTTTCAACAACAGCACCAGCACCAGTTTTTGAACTTAACTTTCTTGGTC TGCCTATTCGTCAGGTACAACTTTGTTACTTTCCTGTAACAATATATATA TATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTTTGTCTCT TTCTGCAGTCCTCTAAAATAGGTTTCTTAGATATTAATAAGGTCATGTTT CATGATAGGGGGAGAGGGAGTGCCCCTATTACATGCGCACTGGCTCTTGT AAATTTGGAGCAAACTGCAAGTTCAACCATCCTGACCCTACAGCTGTTGG AGGATGTGAACCTCCTTCAGGGTTTGGTAATGGAGGGCCTATTTCATTAC AGGGTGTAGCACGACCATCTGTACCCTCCTGGTCTTCTCCAAGATCATTA AATGAAGCATCTCCTTTTGTGCCAATGATGCTTTCACCTACTCAAGGAGT TTCTACCCAAAGTTCTGACTGGAATGGATACCAGGTAAATAGATAGATTC AATGTCAGTAAGCATATGGCAAGGAGCAATCCATTATGTAATTAGTACTA GGTAGTGCAATGTTAAATCTTTGTTGCTGCAGATACTTTGGCATTGTTGT GTTTGCATTTGTTTCCTTTTTGTAACTTTATATTGTCCTGTCATTGGTTT CCTTATGTATTTTAAATAACTTCCTAAATTGTGAGATAATGTCATTGTCA CCTGTTGACTATTGCAGACTTGTCATTAATTTACATGTTTTGTTATAAGT ACGTTGAATACTCTAATAAAATAAATATTAAGCCATTTGAGGTTTGAGTG ATAAATACCCAAATCAATTACTACAAAAAAGTTCTTATGATTTAGAGTGT CCAGTTTTGTTAATCTGCTGTGTGATCTATTTTGTTAAACTAGCAAGCGT ATTGAAGAATTATGCATATTTGCCTTTATGCCTAGAAGTGAATTTGAAAT TGCACCTATTACTGATCTTTAAAAGTAAAAATATGATTATGGCATCTAAT CATTAGATTTGTTGTGATCATTCTACAGCCCCATTTCCCTTCCTCCCTAG TGTTTGTTATTCTTTTTTCTGTGCCATGATTTCTACGGGGAAGCATCTTA CTCTATGCAATGCAAGAACTGAGTGGTCTTGTTCGTTTACTTGAGTTAAC TATTCTGTCAGCTGAACTCATGCAAATGATTGTTTTCCTAATAAATTGAC CCATTTGTGGTTTGTAAAGGCATCTGTTTACCTACCTGAGAGGAACATGC ATCCACCTTCTACATTTGTCTTGAACAACCCAGCAGTCGATACAAATGTT TACTTGCACCATCAAAAGCAGATGTCTGTGGAAGAGTTTCCAGAAAGGCC TGGTGAACCTGAATGTAGCTACTTCTTAAAAACTGGGGATTGCAAGTTTA AATCTAATTGTAAATTTCACCATCCAAAGAATCGGATTGCAAGATTACCT CCATGCAACCTCAGTGACAAGGGTCTTCCTTTGAGACCTGTAAGGCTTTA TATCTGAAAATCTTGAAATATTGTTTTCTTTTGTTTAGCATGTGGTTGTG TTAATCTAAAATATATGGAATTAGCATGGCATGGTTACCTGGATATGACT GTTTCTGATTTTGGAAAGATATTTCCTTTAATTTGTTTAGTACTATGGGA CTACACGCTTGATTGGCTAGTTTCTCTTATTTAATGTAAATTTTATTTGT CATGAAATCCAGGACCAAAGTGTCTGCTCCCATTACAGTCGCTATGGAAT TTGCAAATTTGGACCAGCTTGTAAGTTTGACCACCCAATAAACTTGCAGC CCTTAATGATGTCTGGACTTGGTGACCAGTCATATTCAAATTCAGCTAGT GTTGAGGTGGCTGGGATAGGTGAAAGTACAGGTGAAACTGATGCAACAAT TCAGCAATCTGTGTAAACATGTCTTCGAGGATCTTCTAGCTATCACCAAA TTTGTAGTTTTCTTTTTAAACATGATAAATTTATTTAACTCTTCCCTAGC ACTGTCCAATGCAGCACAAGCATTGCAAAGAATAGCAACATATATATGTC AAACAGTTTATATGTATTTATCACAAGTAACATTTGCATGTGTAGATTTT CTTTTATTCTTGGCTTGTTTTCTTGGATTACAGTTAGTCTGGTTTGAAAT GGTTGTTGTGGGTTTTCTTATTTTACGTTTGTCAATGGGGTTATGAACCT TTGTATGTCATAATTAGCAACTAGTGGCACATCTGATGAGCAAAATAAAT TGATAACCAACCCACATGGAGGTCAGTGTTTGGTTTGCAAAAGATTAACC ATACATTTTTAAACATTTTGTAAAGCCATTGCTTTTTTTTGTCAGTGGGC CTGGTTGATTTATAGCCTTCAATTTTATACTTTTATC
back to top

Coding sequence (CDS) from alignment at Chr03:43381010..43385746+

>Phvul.003G207900.1_Pv_G19833_v2.1 ID=Phvul.003G207900.1_Pv_G19833_v2.1; Name=Phvul.003G207900.1; organism=Phaseolus vulgaris; type=CDS; length=1458bp; location=Sequence derived from: Chr03:43381010..43385746+ (Phaseolus vulgaris
ATGGAAGGCTCTGAATCCGATTCTGCGCCACTTTCCATTTCCAATGGCGA
AGATCCCCAATTGGGGGCTTCTTCCCCCCCTCCTCCTCCTCCTCCACCGT
CAGATCTTAATCACGCGGTGGAGCATGAGACACTCTCTGGGGAGCTTCAG
AGCAAGTTGGATTTGAAGGGTGAGGATGAAAGTGAGGACAAAGTTTCCGA
CTTGAACGACGGTGGAGGAGTTTGCGACGAAGAAACTGCTAAGGGTGATG
GAGATAGTAGGGGTTCGGAGACAAATAGTTGGAATGAGGAAGTGGGTGTT
GATGTTGATGTTGATGCTGATGAAGATGAAGATGAAGATGATGTTGGTGT
TGGTGATGATGGAGTGGAGACGAAGGAAGAGAGAAACAGTGATATGACTC
ACCACTATCCTTTGAGGCCTGAAGCTGAGGATTGTGCATTTTATATGAAA
ACTGGGAATTGCAAGTTTGGGTTTAACTGCAAGTTTAATCACCCTATTAG
GAGGAAAACCCAGGCTGTTAAAGAGAAGACGGGAGAAGGAGAAGAACCCA
CAGACAGATCAAGCACAACAGAATGCAAGTATTATCAAAGATCTGGGGGT
TGTAAGTTTGGAAAATCTTGTAAATATAACCACACAAGAGGAAAATTTTC
AACAACAGCACCAGCACCAGTTTTTGAACTTAACTTTCTTGGTCTGCCTA
TTCGTCAGGGGGAGAGGGAGTGCCCCTATTACATGCGCACTGGCTCTTGT
AAATTTGGAGCAAACTGCAAGTTCAACCATCCTGACCCTACAGCTGTTGG
AGGATGTGAACCTCCTTCAGGGTTTGGTAATGGAGGGCCTATTTCATTAC
AGGGTGTAGCACGACCATCTGTACCCTCCTGGTCTTCTCCAAGATCATTA
AATGAAGCATCTCCTTTTGTGCCAATGATGCTTTCACCTACTCAAGGAGT
TTCTACCCAAAGTTCTGACTGGAATGGATACCAGGCATCTGTTTACCTAC
CTGAGAGGAACATGCATCCACCTTCTACATTTGTCTTGAACAACCCAGCA
GTCGATACAAATGTTTACTTGCACCATCAAAAGCAGATGTCTGTGGAAGA
GTTTCCAGAAAGGCCTGGTGAACCTGAATGTAGCTACTTCTTAAAAACTG
GGGATTGCAAGTTTAAATCTAATTGTAAATTTCACCATCCAAAGAATCGG
ATTGCAAGATTACCTCCATGCAACCTCAGTGACAAGGGTCTTCCTTTGAG
ACCTGACCAAAGTGTCTGCTCCCATTACAGTCGCTATGGAATTTGCAAAT
TTGGACCAGCTTGTAAGTTTGACCACCCAATAAACTTGCAGCCCTTAATG
ATGTCTGGACTTGGTGACCAGTCATATTCAAATTCAGCTAGTGTTGAGGT
GGCTGGGATAGGTGAAAGTACAGGTGAAACTGATGCAACAATTCAGCAAT
CTGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding