Phvul.003G251800.3

Transcript Overview
NamePhvul.003G251800.3
Unique NamePhvul.003G251800.3_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03supercontigChr03:49081488..49082547 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL009Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL128Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL144Pisum sativum Cameor genome v1aPisum sativum
pspvL315Pisum sativum Cameor genome v1aPisum sativum
pvvuR311Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR339Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR380Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR395Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvL340Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL711Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL787Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL1185Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0136Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0558Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0559Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1120Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1151Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL062Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL203Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL756Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR305Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR317Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR371Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR329Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR392Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR327Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR362Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR393Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR319Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR328Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR277Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR332Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR352Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR400Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR428Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR432Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL681Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL758Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL729Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL782Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL317Cicer arietinum
carpvL689Cicer arietinum
carpvL781Cicer arietinum
ccapvL190Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL523Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL609Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL679Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR369Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR406Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR438Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR442Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR338Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR391Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR423Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR377Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR405Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR370Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR437Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR440Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR396Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR429Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR431Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR274Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR283Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR305Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR285Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR312Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR364Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.003G251800Phvul.003G251800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G251800.3_Pv_G19833_v2.1Phvul.003G251800.3_Pv_G19833_v2.1Phaseolus vulgarispolypeptide
Phvul.003G251800.3Phvul.003G251800.3_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G251800.3.v2.1.five_prime_UTR.1Phvul.003G251800.3.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G251800.3.v2.1.CDS.1Phvul.003G251800.3.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G251800.3.v2.1.CDS.2Phvul.003G251800.3.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G251800.3.v2.1.CDS.3Phvul.003G251800.3.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G251800.3.v2.1.three_prime_UTR.1Phvul.003G251800.3.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 8.833e-43
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 1
Query:    1 MNHRAVEAHMRLFSHQYPTAFTQLTPPQQAK-PRRKRNK--------NGVMGSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
            MN+   + +M   S  YP  +TQ+  P + K P+R+R K        +G  G  +KRKL+ EQVN+LE +F  +HKL+SERKD+LA ELG+DPRQVAVWFQNRR RWK K+LEEEY+ LKN H+  ++ KC L++ V
Sbjct:    1 MNYTVDDQNMAFISQLYPDVYTQIVQPGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEV 137          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.813e-40
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    1 MNHRAVEAH-MRLFSHQYPTAFTQLTPPQ--QAKP--RRKRNKNGVM----------GSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
            MN++ V+ H + L S  YP  +T L P Q  +AKP  RRKR    V+          G  +KRKLS EQV +LE +F   HKL+SERKD+LA ELG+DPRQVAVWFQNRR RWK K++E+EY+ LKN +ETT+++KC L + V
Sbjct:    1 MNNQNVDDHNLLLISQLYPNVYTPLVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEV 143          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 8.498e-33
Identity = 56/104 (53.85%), Postives = 81/104 (77.88%), Query Frame = 1
Query:  121 VMGSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV---SSSLTESQNQERR 423
            + G  +KRKL+ EQVN+LE +F  +HKL+S RK+++A ELG+DPRQVAVWFQNRR RWK KKLEEEY+ LKN H+  +L +C L++++   +  L+E+Q++ R+
Sbjct:   66 IGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRK 169          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.655e-25
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  136 KKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
            KKR+LS EQV +LE +F  + KL++ RK  LA ELG+DP+QVAVWFQNRR R K+K LEEE+S LK+ H+  +L KCHL+  V
Sbjct:   62 KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEV 144          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.799e-25
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  136 KKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
            KKR+LS EQV +LE +F  + KL++ RK  LA ELG+DP+QVAVWFQNRR R K+K LEEE+S LK+ H+  +L KCHL+  V
Sbjct:   62 KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEV 144          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX12 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.742e-24
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  109 NKNGVMGSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
             ++G     KKR+LS EQ   LE +F  + KL++ RK QLA ELG+D +QVAVWFQNRR R K+K +EEE++ L++ H+  +LQ CHL+T +
Sbjct:   52 GESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETEL 143          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica OX=39946 GN=HOX12 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.038e-23
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  109 NKNGVMGSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRV 384
             ++G     KKR+LS EQ   LE +F  + KL++ RK QLA ELG+D +QVAVWFQNRR R K+K +EEE++ L++ H+  +LQ CHL+T +
Sbjct:   52 GESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETEL 143          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.756e-22
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  127 GSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRVSSSLTE 402
            G  KKR+LS EQV  LE++F +++KL+ ERK +LA +LG+ PRQVAVWFQNRR RWKTK+LE +Y+ L++ +++  L    L+    + L E
Sbjct:   48 GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAE 139          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.756e-22
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  127 GSTKKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRVSSSLTE 402
            G  KKR+LS EQV  LE++F +++KL+ ERK +LA +LG+ PRQVAVWFQNRR RWKTK+LE +Y+ L++ +++  L    L+    + L E
Sbjct:   48 GGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAE 139          
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.289e-22
Identity = 45/73 (61.64%), Postives = 59/73 (80.82%), Query Frame = 1
Query:  136 KKRKLSAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTL 354
            KKR+L+ EQV+LLEK+F  ++KL+ ERK QLA +LG+ PRQVAVWFQNRR RWKTK+LE +Y  LK+ ++  L
Sbjct:   68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLL 140          
The following BLAST results are available for this feature:
BLAST of Phvul.003G251800.3 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ATB40_ARATH8.833e-4351.09Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
ATB21_ARATH2.813e-4052.45Homeobox-leucine zipper protein ATHB-21 OS=Arabido... [more]
ATB53_ARATH8.498e-3353.85Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]
HOX14_ORYSJ1.655e-2559.04Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HOX14_ORYSI1.799e-2559.04Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HOX12_ORYSJ9.742e-2450.00Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HOX12_ORYSI1.038e-2350.00Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HOX4_ORYSJ3.756e-2250.00Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI3.756e-2250.00Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HAT5_ARATH6.289e-2261.64Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availableGENE3D1.10.10.60coord: 42..111
e-value: 1.0E-16
score: 62.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..153
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 44..105
e-value: 4.6E-16
score: 69.4
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 46..99
e-value: 3.3E-15
score: 55.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 41..101
score: 15.791
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 46..102
e-value: 5.48447E-11
score: 53.0161
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 76..99
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 45..109

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.003G251800.3_Pv_G19833_v2.1

>Phvul.003G251800.3_Pv_G19833_v2.1 ID=Phvul.003G251800.3_Pv_G19833_v2.1; Name=Phvul.003G251800.3_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=154bp
MNHRAVEAHMRLFSHQYPTAFTQLTPPQQAKPRRKRNKNGVMGSTKKRKL
SAEQVNLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKT
KKLEEEYSNLKNLHETTLLQKCHLQTRVSSSLTESQNQERRDLKDRRSID
RKR*
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mRNA from alignment at Chr03:49081488..49082547+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.003G251800.3_Pv_G19833_v2.1 ID=Phvul.003G251800.3_Pv_G19833_v2.1; Name=Phvul.003G251800.3; organism=Phaseolus vulgaris; type=mRNA; length=1060bp; location=Sequence derived from: Chr03:49081488..49082547+ (Phaseolus vulgaris
CATTTAAGTGTTTGAAGAAGAAGATCTCTCACTCATCTTTGAGATCATGA ATCATCGAGCTGTTGAAGCCCATATGAGGCTCTTCTCTCACCAATATCCT ACTGCATTCACTCAACTAACTCCTCCTCAACAAGGTATCTATTCATTCAT ATTACAACGCTTCACATTTTTCTAATATATATTCATTATATGATATTGGA TTAATTTGCTCACGAAGCCAAGCCAAGACGCAAGAGAAACAAAAATGGAG TTATGGGCTCCACCAAGAAGAGAAAGCTCAGTGCTGAGCAAGTTAATCTT CTTGAGAAAAATTTCTGCATTCAACATAAACTTCAATCTGAAAGGAAAGA CCAACTCGCATTTGAGCTTGGTATGGACCCTCGACAAGTTGCGGTATGGT TTCAAAATCGACGTTTTCGTTGGAAGACTAAAAAGTTGGAGGAAGAGTAC TCCAATCTTAAGAATCTTCATGAAACCACCCTTCTCCAGAAATGCCACCT TCAGACTCGGGTAAGTAACATTACTATATAGCTTTTCAATACTATAGATC ATACCATAAGTTAAAGAGTTCAAATAATAGGAGTATATAATCATTTTTAT TTATCACTACATGGATCGTAGTAGGAATGATGTCACGCCTCAGTGAGTCG ACCGATAGTTAAAGTTCAATTACGTTCAATTAAGATTAACGAAGTTAATT CATGATTAGGAGTTAAGCAATGCAGTTCTAATCATAGTCCAACTTTTTAA CATTATCCAATAAGAAAAGTTCACCAAAGGTAATATAAATAGTACATATT CCAATAATCGGGTACGTCATCATATACAGTGTTATGAGAATCAAATACCG AACGTTTTTACTGACTTGAGCATCGGAGTGTCTTCTGCAGGTATCTTCGA GTCTAACTGAGAGTCAAAACCAGGAAAGAAGGGATTTAAAGGACAGACGA TCGATCGATAGAAAGAGATAAAAGAATCCTCTTAATAGCTTCTCTAGACC CCAATCATCACACTAGAACAATCACATATTTTTATTAAAAATATTAATTC CACAAAATAA
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Coding sequence (CDS) from alignment at Chr03:49081488..49082547+

>Phvul.003G251800.3_Pv_G19833_v2.1 ID=Phvul.003G251800.3_Pv_G19833_v2.1; Name=Phvul.003G251800.3; organism=Phaseolus vulgaris; type=CDS; length=462bp; location=Sequence derived from: Chr03:49081488..49082547+ (Phaseolus vulgaris
ATGAATCATCGAGCTGTTGAAGCCCATATGAGGCTCTTCTCTCACCAATA
TCCTACTGCATTCACTCAACTAACTCCTCCTCAACAAGCCAAGCCAAGAC
GCAAGAGAAACAAAAATGGAGTTATGGGCTCCACCAAGAAGAGAAAGCTC
AGTGCTGAGCAAGTTAATCTTCTTGAGAAAAATTTCTGCATTCAACATAA
ACTTCAATCTGAAAGGAAAGACCAACTCGCATTTGAGCTTGGTATGGACC
CTCGACAAGTTGCGGTATGGTTTCAAAATCGACGTTTTCGTTGGAAGACT
AAAAAGTTGGAGGAAGAGTACTCCAATCTTAAGAATCTTCATGAAACCAC
CCTTCTCCAGAAATGCCACCTTCAGACTCGGGTATCTTCGAGTCTAACTG
AGAGTCAAAACCAGGAAAGAAGGGATTTAAAGGACAGACGATCGATCGAT
AGAAAGAGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001356HD
IPR017970Homeobox_CS
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription