Phvul.003G253300.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PITC_DICDI (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.725e-32 Identity = 74/242 (30.58%), Postives = 124/242 (51.24%), Query Frame = 1 Query: 52 KQDTKVNELRAALGSLSG-RRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRP---GMQNTTSAEDNIRHLVYLLENAILNLSE--GQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYP---NNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEF 750 KQ E+++ L+ + +CTD C RYL ARN+ V K++KML +TL+WR +RP++I+ E + N D+ GR ++ P ++N S E ++LVY LE + E G EQ +++DY + N+ +KT + +H L +H PER+ + +PP +F WK + FL+ T+ KV+F+ + K + + D++NL GG Y+ +E+ Sbjct: 47 KQLEAFKEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNKRDKKGRPIIFAVPRNDTLKNVPS-ELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEY 286
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.031e-31 Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 115 LYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEF 750 L+ T C+ RYL A W+V AKK + +TL WR + + E+ E TGK + D+ GR L L P QNT ++ IRHLV+ LE AI + G E ++ LI++ S +N S+ +++++ILQ HY ERL A + N P F+K + F+DP T +K+KF P + D L S FGG Y HE++ Sbjct: 631 LWLTRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEP--------LDRYVPKDQLDSNFGGSLHFEYHHEKY 833
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.611e-24 Identity = 70/232 (30.17%), Postives = 111/232 (47.84%), Query Frame = 1 Query: 118 YCTDACLRRYLEARNWNVDKAKKMLEETLKWRATY--------RPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTG------LSLNTNIS-LKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEFSRLMTE 768 + T C RYL A W + + TL WR + ++I VA E E+GK + + R +L L+PG QNT ++ ++HLV++LE I + GQ+ ++ LID+ + N+ I + ++++HILQ HYPERL A L N P + F K + F+DP T +K+ F P K + + L S +GG Y+H+ + + E Sbjct: 84 WLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVKYVPK--------NELDSLYGGDLKFKYNHDVYWPALVE 306
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.583e-22 Identity = 76/246 (30.89%), Postives = 116/246 (47.15%), Query Frame = 1 Query: 97 LSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWR----ATYRPEE---IRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDY-----TGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEFSRLMTE--DDVKTAKF 792 LS + + C RYL A WN A K L +TL WR T+ E+ + +VA E ETGK F D R + ++ G QNT S+ ++ LVY++E A +G E+++ L+D+ G+ + + AR ++++Q+HYPERLA L N P AF K + FLDP T K F P ++ + L + + G Y HE + M + DD++ +F Sbjct: 82 LSDWEKFWLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------FENHIEPSQLDALYNGLLDFKYKHEVYWPDMVKKVDDLRLKRF 318
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=CSR1 PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 8.288e-19 Identity = 67/241 (27.80%), Postives = 115/241 (47.72%), Query Frame = 1 Query: 67 VNELRAALGSLSGRRLLYC--TDACLRRYLEARNWNVDKAKKMLEETLKWRATY-RPEEI-----RWAE------VAHEGETGKVSRANFHDRHGRTVLILRPGMQNT---TSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYD 738 + EL A S +L C D L R++ AR W+++KA M+ +L+WR +PE+I R A+ + + E GK + F D++G ++ +RP + + T AE + + + ++E A L L E + + L D +G S+ N+ + +I + HYPE L F++ P IF W +K +LDP K+ F ++ ++ + +P E GGK +D Sbjct: 116 LKELDGAAVSKEFWSMLRCDYPDNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETS-EYSLLIIEQARLFLKEPCDTATILFDLSGFSM-ANMDYAPVKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKDEYNFD 348
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=SEC14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.625e-19 Identity = 75/245 (30.61%), Postives = 124/245 (50.61%), Query Frame = 1 Query: 55 QDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSR---ANFH--DRHGRTVLILRPG------MQNTTSAEDNIRHLVYLLENAI-LNLSEGQEQMSWLI-------DYTGLSLNTNIS-LKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSL 729 Q+ + +LR+ L + + L D+ L R+L AR ++V AK+M E KWR Y I + H E V++ +H D+ GR V G M+ T+ E +++LV+ E+ + L +L+ D G+S+++ S L R+ +I QN+YPER+ +L N P F ++ K FLDP TV K+ F+ ++ +S EL++ + +NLPS+FGGK+ + Sbjct: 31 QEGALKQLRSELEAAGFKERL--DDSTLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTI--MQDFHYDEKPLVAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLVETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQS-ELLKQI-PAENLPSKFGGKSEV 268
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC3H8.02 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.118e-18 Identity = 64/222 (28.83%), Postives = 97/222 (43.69%), Query Frame = 1 Query: 127 DACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGE-------------TGKVSRANFHDRHGRTVLILRPGMQNT--TSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEE 747 D L R+L AR WNV+ A +M +T+ WR+ E+ E+ + GK D+H R V +R + S E R V+++E A L L E + + D T S+ +N+ + +I + HYPE L ++ P +FQ W +K +LDP V KVKF + +Q + DN+ EFGG Y + E Sbjct: 124 DGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSM-SNMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_DROPS (Protein real-time OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=retm PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.798e-17 Identity = 72/262 (27.48%), Postives = 115/262 (43.89%), Query Frame = 1 Query: 4 FLLRKQGQNQLEIDSTKQDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRP----EEIRWAEVAHEGETGKVSRANFHDRHGRTVLILR------PGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQM-------SWLIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732 F+ R GQ S Q++K+ ELR L + + LR +L AR+W+V +A ML ++L+WR +R EE V E G + HD+ GR + ILR G+ + E +R +++ E I ++E E++ S L+D GLS+ +K II ++ +YPE + + PR+F W V F+D T K F P+ + + + D + +P GG M Sbjct: 207 FIARNLGQL-----SPMQESKLLELRKMLDGVDDLERVPSYQTILR-FLSARDWHVSQAFAMLCDSLQWRKEHRMDSLLEEYTEPAVVVEHFPGG---WHHHDKDGRPIYILRLGHMDVKGLLKSLGMEGLLRLALHICEEGIQKINESAERLDKPVLNWSLLVDLEGLSMRHLWRPGIKALLYIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCEHMKDGLAQYIDEEIVPDFLGGPCKTM 459
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster OX=7227 GN=retm PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.038e-17 Identity = 69/260 (26.54%), Postives = 116/260 (44.62%), Query Frame = 1 Query: 4 FLLRKQGQNQLEIDSTKQDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFH--DRHGRTVLILR------PGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQM-------SWLIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732 F+ R GQ S Q++K+ ELR L + + LR +L AR+W+V +A ML ++L+WR +R + + AE + + +H D+ GR V ILR G+ + + +R +++ E I ++E E++ S L+D GLS+ +K +II ++ +YPE + + PR+F W V F+D T K F P+ + + D + +P GG M Sbjct: 209 FIARSLGQL-----SPMQESKLLELRKMLDGVDDLERVPSYQTILR-FLAARDWHVSQAYAMLCDSLRWRREHRIDAL-LAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTM 461
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae OX=7165 GN=retm PE=3 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 8.400e-17 Identity = 63/221 (28.51%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 136 LRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANF------HDRHGRTVLILRPGMQNT-----TSAEDNIRHL-VYLLENAILNLSE-----GQEQMSW--LIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFV-YPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732 L R+L AR++++DKA ML+E+L+WR +E R + E +T V F HD+ GR + ILR G + + ED + L +++ E + + E G+ +W L+D GLS+ +K II ++ +YPE + + PR+F W V F+D T K F P+ + + ++ D D +PS GG +++ Sbjct: 258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSCNVI 473 The following BLAST results are available for this feature:
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.003G253300.2_Pv_G19833_v2.1 >Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=297bpback to top mRNA from alignment at Chr03:49265162..49269407+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2; organism=Phaseolus vulgaris; type=mRNA; length=4246bp; location=Sequence derived from: Chr03:49265162..49269407+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr03:49265162..49269407+ >Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2; organism=Phaseolus vulgaris; type=CDS; length=891bp; location=Sequence derived from: Chr03:49265162..49269407+ (Phaseolus vulgarisback to top |