Phvul.003G253300.2

Transcript Overview
NamePhvul.003G253300.2
Unique NamePhvul.003G253300.2_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03supercontigChr03:49265162..49269407 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL009Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL128Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL144Pisum sativum Cameor genome v1aPisum sativum
pspvL315Pisum sativum Cameor genome v1aPisum sativum
pvvuR311Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR339Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR380Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL267Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL0916Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0941Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL340Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL943Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL711Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL787Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0839Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1185Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0136Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0558Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0559Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1120Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1151Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL062Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL756Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR305Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR317Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR371Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR329Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR392Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR327Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR362Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR393Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR319Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR328Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR277Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR357Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvuaR332Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR400Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR428Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR432Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL681Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL758Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL729Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL782Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL317Cicer arietinum
carpvL689Cicer arietinum
carpvL781Cicer arietinum
ccapvL190Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL523Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL609Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL679Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR369Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR406Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR442Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR338Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR391Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR423Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR377Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR405Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR370Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR440Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR396Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR431Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR274Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR283Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR305Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR285Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR312Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR351Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.003G253300Phvul.003G253300_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G253300.2Phvul.003G253300.2_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.003G253300.2_Pv_G19833_v2.1Phvul.003G253300.2_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G253300.2.v2.1.five_prime_UTR.1Phvul.003G253300.2.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.003G253300.2.v2.1.five_prime_UTR.2Phvul.003G253300.2.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G253300.2.v2.1.CDS.1Phvul.003G253300.2.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G253300.2.v2.1.CDS.2Phvul.003G253300.2.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G253300.2.v2.1.CDS.3Phvul.003G253300.2.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G253300.2.v2.1.CDS.4Phvul.003G253300.2.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.003G253300.2.v2.1.CDS.5Phvul.003G253300.2.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.003G253300.2.v2.1.three_prime_UTR.1Phvul.003G253300.2.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PITC_DICDI (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.725e-32
Identity = 74/242 (30.58%), Postives = 124/242 (51.24%), Query Frame = 1
Query:   52 KQDTKVNELRAALGSLSG-RRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRP---GMQNTTSAEDNIRHLVYLLENAILNLSE--GQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYP---NNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEF 750
            KQ     E+++    L+    + +CTD C  RYL ARN+ V K++KML +TL+WR  +RP++I+      E  +      N  D+ GR ++   P    ++N  S E   ++LVY LE     + E  G EQ  +++DY     + N+ +KT  + +H L +H PER+  +   +PP +F   WK +  FL+  T+ KV+F+     + K +   +    D++NL    GG     Y+ +E+
Sbjct:   47 KQLEAFKEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNKRDKKGRPIIFAVPRNDTLKNVPS-ELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEY 286          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.031e-31
Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 1
Query:  115 LYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEF 750
            L+ T  C+ RYL A  W+V  AKK + +TL WR  +    +   E+  E  TGK     + D+ GR  L L P  QNT ++   IRHLV+ LE AI  +  G E ++ LI++   S  +N S+   +++++ILQ HY ERL  A + N P     F+K +  F+DP T +K+KF  P        +      D L S FGG     Y HE++
Sbjct:  631 LWLTRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEP--------LDRYVPKDQLDSNFGGSLHFEYHHEKY 833          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.611e-24
Identity = 70/232 (30.17%), Postives = 111/232 (47.84%), Query Frame = 1
Query:  118 YCTDACLRRYLEARNWNVDKAKKMLEETLKWRATY--------RPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTG------LSLNTNIS-LKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEFSRLMTE 768
            + T  C  RYL A  W +      +  TL WR  +          ++I    VA E E+GK     + +   R +L L+PG QNT ++   ++HLV++LE  I  +  GQ+ ++ LID+        +  N+ I  +   ++++HILQ HYPERL  A L N P +   F K +  F+DP T +K+ F  P  K   +        + L S +GG     Y+H+ +   + E
Sbjct:   84 WLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVKYVPK--------NELDSLYGGDLKFKYNHDVYWPALVE 306          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.583e-22
Identity = 76/246 (30.89%), Postives = 116/246 (47.15%), Query Frame = 1
Query:   97 LSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWR----ATYRPEE---IRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDY-----TGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEFSRLMTE--DDVKTAKF 792
            LS     + +  C  RYL A  WN   A K L +TL WR     T+  E+   +   +VA E ETGK     F D   R +  ++ G QNT S+   ++ LVY++E A     +G E+++ L+D+      G+  +    +  AR  ++++Q+HYPERLA   L N P    AF K +  FLDP T  K  F  P         ++  +   L + + G     Y HE +   M +  DD++  +F
Sbjct:   82 LSDWEKFWLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------FENHIEPSQLDALYNGLLDFKYKHEVYWPDMVKKVDDLRLKRF 318          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=CSR1 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 8.288e-19
Identity = 67/241 (27.80%), Postives = 115/241 (47.72%), Query Frame = 1
Query:   67 VNELRAALGSLSGRRLLYC--TDACLRRYLEARNWNVDKAKKMLEETLKWRATY-RPEEI-----RWAE------VAHEGETGKVSRANFHDRHGRTVLILRPGMQNT---TSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYD 738
            + EL  A  S     +L C   D  L R++ AR W+++KA  M+  +L+WR    +PE+I     R A+      +  + E GK +   F D++G  ++ +RP + +    T AE +  + + ++E A L L E  +  + L D +G S+  N+     + +I   + HYPE L   F++  P IF   W  +K +LDP    K+ F      ++   ++     + +P E GGK    +D
Sbjct:  116 LKELDGAAVSKEFWSMLRCDYPDNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETS-EYSLLIIEQARLFLKEPCDTATILFDLSGFSM-ANMDYAPVKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKDEYNFD 348          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=SEC14 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.625e-19
Identity = 75/245 (30.61%), Postives = 124/245 (50.61%), Query Frame = 1
Query:   55 QDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSR---ANFH--DRHGRTVLILRPG------MQNTTSAEDNIRHLVYLLENAI-LNLSEGQEQMSWLI-------DYTGLSLNTNIS-LKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSL 729
            Q+  + +LR+ L +   +  L   D+ L R+L AR ++V  AK+M E   KWR  Y    I   +  H  E   V++     +H  D+ GR V     G      M+  T+ E  +++LV+  E+ +   L        +L+       D  G+S+++  S L   R+  +I QN+YPER+   +L N P  F   ++  K FLDP TV K+ F+  ++ +S EL++ +   +NLPS+FGGK+ +
Sbjct:   31 QEGALKQLRSELEAAGFKERL--DDSTLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTI--MQDFHYDEKPLVAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLVETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQS-ELLKQI-PAENLPSKFGGKSEV 268          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC3H8.02 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.118e-18
Identity = 64/222 (28.83%), Postives = 97/222 (43.69%), Query Frame = 1
Query:  127 DACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGE-------------TGKVSRANFHDRHGRTVLILRPGMQNT--TSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEE 747
            D  L R+L AR WNV+ A +M  +T+ WR+     E+   E+    +              GK       D+H R V  +R  +      S E   R  V+++E A L L    E  + + D T  S+ +N+     + +I   + HYPE L    ++  P +FQ  W  +K +LDP  V KVKF       +   +Q   + DN+  EFGG     Y + E
Sbjct:  124 DGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSM-SNMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_DROPS (Protein real-time OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=retm PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.798e-17
Identity = 72/262 (27.48%), Postives = 115/262 (43.89%), Query Frame = 1
Query:    4 FLLRKQGQNQLEIDSTKQDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRP----EEIRWAEVAHEGETGKVSRANFHDRHGRTVLILR------PGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQM-------SWLIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732
            F+ R  GQ      S  Q++K+ ELR  L  +     +      LR +L AR+W+V +A  ML ++L+WR  +R     EE     V  E   G     + HD+ GR + ILR       G+  +   E  +R  +++ E  I  ++E  E++       S L+D  GLS+       +K    II  ++ +YPE +    +   PR+F   W  V  F+D  T  K  F  P+ +   + +    D + +P   GG    M
Sbjct:  207 FIARNLGQL-----SPMQESKLLELRKMLDGVDDLERVPSYQTILR-FLSARDWHVSQAFAMLCDSLQWRKEHRMDSLLEEYTEPAVVVEHFPGG---WHHHDKDGRPIYILRLGHMDVKGLLKSLGMEGLLRLALHICEEGIQKINESAERLDKPVLNWSLLVDLEGLSMRHLWRPGIKALLYIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCEHMKDGLAQYIDEEIVPDFLGGPCKTM 459          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster OX=7227 GN=retm PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.038e-17
Identity = 69/260 (26.54%), Postives = 116/260 (44.62%), Query Frame = 1
Query:    4 FLLRKQGQNQLEIDSTKQDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFH--DRHGRTVLILR------PGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQM-------SWLIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732
            F+ R  GQ      S  Q++K+ ELR  L  +     +      LR +L AR+W+V +A  ML ++L+WR  +R + +  AE +      +     +H  D+ GR V ILR       G+  +   +  +R  +++ E  I  ++E  E++       S L+D  GLS+       +K   +II  ++ +YPE +    +   PR+F   W  V  F+D  T  K  F  P+     + +    D + +P   GG    M
Sbjct:  209 FIARSLGQL-----SPMQESKLLELRKMLDGVDDLERVPSYQTILR-FLAARDWHVSQAYAMLCDSLRWRREHRIDAL-LAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTM 461          
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae OX=7165 GN=retm PE=3 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 8.400e-17
Identity = 63/221 (28.51%), Postives = 105/221 (47.51%), Query Frame = 1
Query:  136 LRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANF------HDRHGRTVLILRPGMQNT-----TSAEDNIRHL-VYLLENAILNLSE-----GQEQMSW--LIDYTGLSLNT--NISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFV-YPNNKESVELMQSLFDLDNLPSEFGGKTSLM 732
            L R+L AR++++DKA  ML+E+L+WR     +E R   +  E +T  V    F      HD+ GR + ILR G  +      +  ED +  L +++ E  +  + E     G+   +W  L+D  GLS+       +K    II  ++ +YPE +    +   PR+F   W  V  F+D  T  K  F   P+   + + ++   D D +PS  GG  +++
Sbjct:  258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSCNVI 473          
The following BLAST results are available for this feature:
BLAST of Phvul.003G253300.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PITC_DICDI2.725e-3230.58Phosphatidylinositol transfer protein 3 OS=Dictyos... [more]
YJX4_SCHPO8.031e-3135.85CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
PDR16_YEAST5.611e-2430.17Phosphatidylinositol transfer protein PDR16 OS=Sac... [more]
PDR17_YEAST2.583e-2230.89Phosphatidylinositol transfer protein PDR17 OS=Sac... [more]
CSR1_ASHGO8.288e-1927.80Phosphatidylinositol transfer protein CSR1 OS=Ashb... [more]
SEC14_CANGA8.625e-1930.61SEC14 cytosolic factor OS=Candida glabrata (strain... [more]
YAS2_SCHPO7.118e-1828.83CRAL-TRIO domain-containing protein C3H8.02 OS=Sch... [more]
RETM_DROPS3.798e-1727.48Protein real-time OS=Drosophila pseudoobscura pseu... [more]
RETM_DROME5.038e-1726.54Protein real-time OS=Drosophila melanogaster OX=72... [more]
RETM_ANOGA8.400e-1728.51Protein real-time OS=Anopheles gambiae OX=7165 GN=... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00180CRETINALDHBPcoord: 45..67
score: 30.43
coord: 162..183
score: 19.32
coord: 231..240
score: 62.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..296
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 87..242
e-value: 1.1E-45
score: 167.8
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 89..240
e-value: 8.0E-36
score: 123.2
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 81..245
score: 21.159
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 99..240
e-value: 7.15595E-43
score: 142.524
IPR011074CRAL/TRIO, N-terminal domainSMARTSM01100CRAL_TRIO_N_2coord: 42..67
e-value: 1.5E-8
score: 44.4
IPR011074CRAL/TRIO, N-terminal domainPFAMPF03765CRAL_TRIO_Ncoord: 42..66
e-value: 1.6E-7
score: 31.4
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 3..270
e-value: 4.2E-79
score: 267.9
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 82..257
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 9..82

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.003G253300.2_Pv_G19833_v2.1

>Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=297bp
MFLLRKQGQNQLEIDSTKQDTKVNELRAALGSLSGRRLLYCTDACLRRYL
EARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHD
RHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDY
TGLSLNTNISLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKF
FLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEF
SRLMTEDDVKTAKFWGLDEKPFNPPKKGHAGAEVAPEPVSVQTVVS*
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mRNA from alignment at Chr03:49265162..49269407+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2; organism=Phaseolus vulgaris; type=mRNA; length=4246bp; location=Sequence derived from: Chr03:49265162..49269407+ (Phaseolus vulgaris
GCAAAATTAAAGTTAAGAAGAAGACATTAAAGAAGTGAAAGGGAAAGACA CTCTCTTTCTTTCTCGTTTCTGTGTTTAGGCAGACTCAAACAGAAGCGTC ATTAAATGAGACTCGCGTGAGCCAAATCACAAGAGACATGTCGCCAGAGT GTGCGTGATTGCGAATCCTACCATCCATCTCACTCATTCCCCACTCACTC ACTCAAACGCAACACAATGCAATGCACGCTCACTTCGTAATTCTCTTCTG GAAAACCTCTTCAACCACATAACATTACCCTTTCAGCTCCTTCTTTCTCA CCAGGTTTCTTTCATTTTCACTCTTCACTCTCTGGATCCGATTCTCGAAT ATTAATTTCTCTTTTCTTTTTCTTTTTCTATTTTATTCCTTTCACCTCTC TCCTGTTACTGCTTCATCAGATTCCAGGCCTTTATTCTAATTCATTTTAC GCTTTCTCCCTTTTCGTTTTCCTTTTGTCAGTCAACGCTGCCGTTTCACG CGAGCGTGTTAAACGGATCGGTTTCAGAAGAGAGAAAATCAAATTGAGGT TGAAAAGGTTGACCTTCTTCGTGTTGGACTCAGTGAAAACGAAAGAGAAT TGATGTCTTTTTACGCTTTTGCCTTTGCTCCAATAGATCGGTCGTCTGCT TATATTTTATGTTGTTAATTAGTTTTTGTATTCGGTCAACGGAGGGGCTT AGGGAAAGTGCTTAAATAATTGTTAGGTGTTTCGGTATGTAAGTGCGCCG TGTTTTGGTTTCATTGTGATTAAGGTGATGTAGGAACTTGTGATAGATTA CAGTGGTTTTTTATTTGATTGTTATTTCTATTTTGGGGAAATCGAAATGG AAACCTTGTTTTATTGAGGGGAGTTCTTCTTTACGAGGGTTTGATTGGTG CTAACTTCCGGTTATTTTGTTCTCTGTTTCAACTTTCATGATTTTGTATG GTTGTAGATTTTCGGTTTGAGGAGGAAGTGTAATCTTGAAGTTTTGTGTT GCAGGTGGAAGCCGGTGCGTTTGGTGGACACCATGTTCCTTCTTAGAAAG CAAGGCCAGAATCAGCTGGAGATTGATTCCACAAAACAAGATACAAAGGT ATGCCTATTTGTTAACTCAGAAGTTCCATATCAGATTTTGAAAAATCCTA AACAACAGTTCTAATGATACACTTTCTGCTATACATCTTTCTTGTTTATT ATTTTTTTTTTAAAACTACAAAATTATATGTGGGGTTCCGTAAATATGAA GTGGATCCCTCACGATTCTGTGGTTTTCAACAACTTTTAGCAAATAATAG AGACTACATCAGAGAACGTGTTAGAGAAAGCGAACCTTTATGAAATTGCA AATAGAAATTATTTGAGTCTATTATTCCCTTCATGGAAATTGGCATCCTC TAAGGATGATGGGAAATTATTAATACTTGTCTGTAAGAAAAGACATCCAT GAATGCTAGCTTTTATGAGGACCAAGTGTAACACATATGCAAACAGGTGA ATGAACTCAGGGCTGCTCTTGGGTCCCTCTCTGGTCGTCGACTACTGTAT TGCACAGATGCATGTCTAAGGAGATATTTAGAAGCAAGGAATTGGAATGT TGATAAAGCAAAGAAAATGCTGGAGGAAACACTCAAGTGGAGGGCAACTT ATAGGCCAGAAGAAATCCGTTGGGTTAGTTTGATTTAACTGACTTTGATC CCCACGTGCTCAATTTGGTGATGCCAAAAATGAAATTGACAATGATGGTT TCATACTTATAACACTGATCCATGTTGTAAACAATTTGACAAATAAATGA TGATCGATCAACATATCAGTTACTTGTTCTAACCTGTCTTGAGCTGACAT AAAGTCTGTGTGTTGTGTTGTTTTTACTTGTGGCAGAAGCAATTCGTTTA TATTGTCCTTTTACTGTTTGATCATCTGCAAGATACTTCTCTGTAGTCTT TACTGCAAACATATCAAGTACTTTTTTTCTTGGAGCAGCATAATTCTTAA ATTATAAATCAATACTTCAGTACTAGATTACTCAATATAAGGCCAAAAAC ATATACATCTAAATTTTAAAATGTTAAGATTGAGTTGTGTCTTTTGAAAT CAATTAAGATCATACATTAGCATCGTAATACATTTAGTTCCAAAATTATG ATACGGTACCTTCTACATGTGTGTAGTATCTGCTTAGTTTGTGAGGACTA AGCCTCTCTTTGTTTCCACTGAAATATGAAAGAAGGGAATTGAAGCAACT GAAATGGGAAGGATAAATAAAATTTCATTCGTTTGTTTGGACTTTAAAAG GAGTGGGAACTATAAAATTTCATGGACTCCACATGTAAGGCGTGGAATCA TACATGTACAGTACAAACACCTGTAATTTTGCTCCTGCATTTCAGATTAT GTCCGTTACTACTACTTGTTTGAAGAATAAATTATATTATCTCATTTCAT TCCATCTTTCAACCAAACAATACATTTTCTCTTTGTCTTAATTCTATTTT CTATTCTCTTATTTATTTATTTACTATTTCATACTCCATCCAAACAGAGC ATTAATGAAACCATCATCAAGTGACAGCCTGTTTATGGATATTGCCCTTT CATGTACTATATATACCCTGTATTTACAATTGAATAACTTCCTACATCCA GGCTGAAGTAGCACATGAGGGTGAGACAGGTAAAGTCTCCAGGGCTAACT TTCATGATCGACATGGGAGGACTGTGCTTATTTTGAGGCCAGGAATGCAG GTTTGTGCAAACATGTATTTTTAATAGGCTTCTCCGTTCACGACTGGCTA ACTTAATCTGTCTAATCTGTTTTCTTTTGTTAGAACACAACTTCAGCTGA AGATAATATCAGGCATTTAGTCTATCTATTGGAAAATGCTATCCTAAATC TTTCCGAAGGTCAAGAACAAATGTCGTGGTTGATAGACTACACAGGATTA TCACTTAATACGAATATTTCTCTTAAAACAGCTCGCGATATTATTCACAT TTTACAAAACCACTATCCAGAAAGGCTTGCTATTGCTTTTCTGTACAATC CACCAAGAATATTTCAGGCTTTCTGGAAGGTTTGTTCTCCTTCCCTGCAA GTTATACTTGGTCTGCTTTTGCATGGCTTTATTTATAGTTTCTAATTGGA AGTTTGCATTGCGTAGTAGTGGTTTCTTTCATTTATATTTTACTTTTAAA GATCAGGTAATACTTGGCTGAGCCTTTTTGCTTATGTTAATGTTATTATG TTCTGTATCTTTATATAATTGAATAGTCAAATCATATAATGTCTGTAAGT TAGGGAAATTTTAGTCGGTTTCCAGCAAAATAAACTCATTTAGAATTATA TTCTGTAGTATTCTTGAAAATCAGCCGTGTAGGTAGTGTTGGCCTTTAAT GTGTTTTTCTTCTCAAGTTCTTGAGGATGGGTTCTGGGATCATGTAGAAG GATGTATGAAGTATCTTAGTTTCTTATGCCCCCACCCTTCTCTTCTTTAA TATATTTCTTCTTCACCTTGATTTAAATTTTTTTATGTTTGTTGACTTCT ATGATTGTACTCTATTTGTGGTTGGATTTGAGCTTTTAATAGTTACCTCT TCCATTTGACAAATTTGAAGTTGGTCTTATTTTGATAGGCCGTCAAGTTC TTCCTGGACCCCAAGACAGTCCAGAAGGTGAAGTTTGTTTATCCCAATAA TAAGGAGAGTGTGGAGCTAATGCAATCACTCTTCGACCTAGATAACCTTC CAAGTGAATTTGGGGGGAAAACAAGTTTAATGTATGATCACGAAGAGTTC TCACGGTTGATGACTGAGGATGATGTGAAAACTGCAAAGTTCTGGGGACT TGACGAGAAGCCTTTCAACCCTCCTAAAAAAGGCCATGCTGGAGCAGAGG TGGCACCAGAACCCGTGTCTGTTCAGACAGTAGTTAGTTAGTTGATCTAG TTTCAAAATGTTGTCACTTATAAACTGAAGTGATTACATATCTGAATTCA GTGGCTAATTTAAGGAGCCGAATAAGCGTTATTTTGTATTTTTCAACTTT TAACCATTTATGGCAATAGCTGCCATATAGTCCTCTCCTTCTAGGTAAGC GAACTTAAATTCTGATTGGATATTCCGACTATATATGTCAATTCTCCAAG CCTGTGCAAAGTCAATTTCTTGTTGTTAGAACTGTCCTTGTGCCTAATAA AGCTAATGCAAACTATGAAAATTGGTCCCAGAGAAATAAATGGCAT
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Coding sequence (CDS) from alignment at Chr03:49265162..49269407+

>Phvul.003G253300.2_Pv_G19833_v2.1 ID=Phvul.003G253300.2_Pv_G19833_v2.1; Name=Phvul.003G253300.2; organism=Phaseolus vulgaris; type=CDS; length=891bp; location=Sequence derived from: Chr03:49265162..49269407+ (Phaseolus vulgaris
ATGTTCCTTCTTAGAAAGCAAGGCCAGAATCAGCTGGAGATTGATTCCAC
AAAACAAGATACAAAGGTGAATGAACTCAGGGCTGCTCTTGGGTCCCTCT
CTGGTCGTCGACTACTGTATTGCACAGATGCATGTCTAAGGAGATATTTA
GAAGCAAGGAATTGGAATGTTGATAAAGCAAAGAAAATGCTGGAGGAAAC
ACTCAAGTGGAGGGCAACTTATAGGCCAGAAGAAATCCGTTGGGCTGAAG
TAGCACATGAGGGTGAGACAGGTAAAGTCTCCAGGGCTAACTTTCATGAT
CGACATGGGAGGACTGTGCTTATTTTGAGGCCAGGAATGCAGAACACAAC
TTCAGCTGAAGATAATATCAGGCATTTAGTCTATCTATTGGAAAATGCTA
TCCTAAATCTTTCCGAAGGTCAAGAACAAATGTCGTGGTTGATAGACTAC
ACAGGATTATCACTTAATACGAATATTTCTCTTAAAACAGCTCGCGATAT
TATTCACATTTTACAAAACCACTATCCAGAAAGGCTTGCTATTGCTTTTC
TGTACAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCCGTCAAGTTC
TTCCTGGACCCCAAGACAGTCCAGAAGGTGAAGTTTGTTTATCCCAATAA
TAAGGAGAGTGTGGAGCTAATGCAATCACTCTTCGACCTAGATAACCTTC
CAAGTGAATTTGGGGGGAAAACAAGTTTAATGTATGATCACGAAGAGTTC
TCACGGTTGATGACTGAGGATGATGTGAAAACTGCAAAGTTCTGGGGACT
TGACGAGAAGCCTTTCAACCCTCCTAAAAAAGGCCATGCTGGAGCAGAGG
TGGCACCAGAACCCGTGTCTGTTCAGACAGTAGTTAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR011074CRAL/TRIO_N_dom
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf