Phvul.004G056900.1

Transcript Overview
NamePhvul.004G056900.1
Unique NamePhvul.004G056900.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr04supercontigChr04:7799745..7803395 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pspvL049Pisum sativum Cameor genome v1aPisum sativum
pvvuR416Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0179Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL141Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL520Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL737Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL456Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL665Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0036Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0313Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0143Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0776Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1164Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1298Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL295Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR405Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR425Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR424Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR427Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR369Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR478Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR488Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL434Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL028Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL503Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL131Cicer arietinum
carpvL445Cicer arietinum
ccapvL684Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL825Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR483Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR467Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR482Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR477Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR505Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR390Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR419Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR426Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR381Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan10g211600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_01577Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun04g084100.3Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_20805.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr04.740.2.6211316cVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_11G00533.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.11G042800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun04g084100.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014655211.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va10G051890.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.11G082600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr04.1000332Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.004G056900Phvul.004G056900_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G056900.1Phvul.004G056900.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.004G056900.1_Pv_G19833_v2.1Phvul.004G056900.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G056900.1.v2.1.CDS.2Phvul.004G056900.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.004G056900.1.v2.1.CDS.1Phvul.004G056900.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G056900.1.v2.1.three_prime_UTR.1Phvul.004G056900.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G056900.1.v2.1.five_prime_UTR.1Phvul.004G056900.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
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BLAST of Phvul.004G056900.1 vs. DB:Swiss
Match: SKI14_ARATH (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.599e-79
Identity = 161/405 (39.75%), Postives = 226/405 (55.80%), Query Frame = 1 
Query:  259 FELDIESTLAAFSDWIEDIEWDF-------RPEDVEFGVGETHEMRGDRDHLHFLGLSWAWNGPENLQPQGVSSRENEM---SVSGDIFKTYQ---------NFDGVFXXXXXXXXXXXXXLTVKHDDNLVLSTEAVQNGTKI----ECDAERGDP--HDALFFVLGYLGVQDLLSVERVCRSLRDAVKGDPLLWRTVQINQQLNEKITDDTLVKLTNRAQGTLQCLILVNCLWITDSGLRSVLQSNTGLIKLSVPDCIRITMEGILFNLRALKSSGKSGIKHLRIGGLAGMCHVTDQQFEELKELLDAGKHLQQREQKPQFYCREYSHILCDDGRQIDIDVCPKCKKVRPIYDCPAESCQQKHLAAQLCRGCTVCITRCVHCGRCIKDI-YEETFCLDSLCLNC 1395
            F +DI +T  A + W+ED+E D+       R +D+  G G   ++        F GLS+ WN     Q  G S     +   +  G +F T +          F G   G     G+     +V      VLS E  +NG  +     C+    D   H A+ F L +L  +DLLSV  VC+SL   V  D LLW+ + I + LNEKIT++ L+ LT RAQGT+QCL +V+C  ITD  L+ V+  N  ++K+ VP C RIT++GIL  LR LKS+GK  +KHL++ GL G   VT   ++EL +LL+    ++Q  QKP+FY R  + + CDD R +DI++CPKC+  + +YDCPAE C+ K   ++ CR C++CI RC HCGRCI D  YEE FCL+ LC  C
Sbjct:   55 FGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIGDGNRQQL--------FAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFSTCKFPESSGENNGFGGALDGDGSCHGAFISASSVDE----VLSHENARNGEVVGSSDRCNNGEEDAYVHPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQVKHLQLRGLFG---VTKDHYDELIDLLNIDNKVKQTIQKPRFYHRGEACVSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLCAVC 444
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BLAST of Phvul.004G056900.1 vs. DB:Swiss
Match: FB327_ARATH (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.580e-57
Identity = 104/255 (40.78%), Postives = 154/255 (60.39%), Query Frame = 1 
Query:  652 DPHDALFFVLGYLGVQDLLSVERVCRSLRDAVKGDPLLWRTVQINQQ-LNEKITDDTLVKLTNRAQGTLQCLILVNCLWITDSGLRSVLQSNTGLIKLSVPDCIRITMEGILFNLRALKSSGKSGIKHLRIGGLAGMCHVTDQQFEELKELLDAGKHLQQREQKPQFYCREYSHILCDDGRQIDIDVCPKCKKVRPIYDCPAESCQ---QKHLAAQLCRGCTVCITRCVHCGRCIKDIYEETFCLDSLCLNCLDQ 1404
            + HDA   VL YL ++++L+VE VCRSLRD+V  +P  W ++ +N   L  ++TD++L+KLT RA G ++CL L  C+ ITD GL+ VL SN  L KLSV  C+R++  G++  LR LKSS + G+K L  GG     + T +QF+EL  LL     +  +E+K +FY    S    +D R  D+++CP C+K   ++DCPA++C    Q   +   CR C VCI RC  CG C+ D   + FC    C+ C+++
Sbjct:  126 EAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSNRLGVKSLITGGAL---YFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYLEDDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCENKPFCFAFSCVVCIEK 377
[Close]
BLAST of Phvul.004G056900.1 vs. DB:Swiss
Match: SKI28_ARATH (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.438e-32
Identity = 83/230 (36.09%), Postives = 121/230 (52.61%), Query Frame = 1 
Query:  658 HDALFFVLGYL-GVQDLLSVERVCRSLRDAVKGDPLLWRTVQINQQLNEKITDDTLVKLTNRAQGTLQCLILVNCLWITDSGLRSVLQSNTGLIKLSVPDCIRITMEGILFNLRALKSSGKSGIKHLRIGGLAGMCHVTDQQFEELKELLDAGKHLQQREQKPQFYCREYSHILCDDGRQIDIDVCPKCKKVRPIYDCPAESCQQKHLAAQLCRGCTVCITRCVHCGRCI 1344
            H+ L  VL YL  + +LLS+ RV RSLRDA++ +  LW  + I   L+ ++TDD L + ++++ G L+ LIL  CL +T+ GLR V+ +N  + K+ VP C  +T EGI+  + +L S     ++ L I G+ G    T Q    L   L +                        +G  ID++VCPKC +VR I  C  ESC QK    + CRGC +CI RC  C  C+
Sbjct:   17 HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFSSKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESL-SKNNHKLETLHINGVNGF---TKQHLSALYTYLSS------------------------EG-TIDLEVCPKCDEVRMIPSCSRESCNQKQ---RKCRGCWLCIPRCAECAVCL 214
The following BLAST results are available for this feature:
BLAST of Phvul.004G056900.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SKI14_ARATH1.599e-7939.75F-box protein SKIP14 OS=Arabidopsis thaliana OX=37... [more]
FB327_ARATH2.580e-5740.78F-box protein At3g27290 OS=Arabidopsis thaliana OX... [more]
SKI28_ARATH1.438e-3236.09F-box protein SKIP28 OS=Arabidopsis thaliana OX=37... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 257..369
e-value: 3.5E-6
score: 28.5
NoneNo IPR availableGENE3D1.20.1280.50coord: 219..256
e-value: 3.7E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 268..334
IPR001810F-box domainPFAMPF12937F-box-likecoord: 219..260
e-value: 9.1E-8
score: 31.9
IPR001810F-box domainPROSITEPS50181FBOXcoord: 219..259
score: 9.63
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 219..262

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.004G056900.1_Pv_G19833_v2.1

>Phvul.004G056900.1_Pv_G19833_v2.1 ID=Phvul.004G056900.1_Pv_G19833_v2.1; Name=Phvul.004G056900.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=499bp
MAFDSSKESRFLIPQEKNLCPSNGSVLDDHLIDSCGCFGSSCCLCCFNGN
LEGETCFDLDYVKGVVDDDEEEEDDDDVLDRLPVDPFELDIESTLAAFSD
WIEDIEWDFRPEDVEFGVGETHEMRGDRDHLHFLGLSWAWNGPENLQPQG
VSSRENEMSVSGDIFKTYQNFDGVFGGGIVAEGSAGGVLTVKHDDNLVLS
TEAVQNGTKIECDAERGDPHDALFFVLGYLGVQDLLSVERVCRSLRDAVK
GDPLLWRTVQINQQLNEKITDDTLVKLTNRAQGTLQCLILVNCLWITDSG
LRSVLQSNTGLIKLSVPDCIRITMEGILFNLRALKSSGKSGIKHLRIGGL
AGMCHVTDQQFEELKELLDAGKHLQQREQKPQFYCREYSHILCDDGRQID
IDVCPKCKKVRPIYDCPAESCQQKHLAAQLCRGCTVCITRCVHCGRCIKD
IYEETFCLDSLCLNCLDQFLHYPGKGEKEGAECTIIRERTMYQFCLYG*
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mRNA from alignment at Chr04:7799745..7803395-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.004G056900.1_Pv_G19833_v2.1 ID=Phvul.004G056900.1_Pv_G19833_v2.1; Name=Phvul.004G056900.1; organism=Phaseolus vulgaris; type=mRNA; length=3651bp; location=Sequence derived from: Chr04:7799745..7803395- (Phaseolus vulgaris
GTCATCAATTTGGGCTTTGATGGTGCGTGTTTTTATGATTCCTTTCAACT
CAATTGAGAAAAAGAGAGAGGAATTAGGCATTGTAGATTGATGGGGTTGG
TATTTTGAGTCTCGGTTATTCTTTGTTGCAGGGGTTGTGTTTTATTGTTA
CAGTGACTGCTAAAAGGAAAAGCAATGGCTTTTGATTCTTCTAAAGAATC
TAGATTTTTGATTCCGCAAGAGAAGAATTTGTGCCCCTCAAATGGGTCGG
TGTTGGATGACCATTTGATCGACAGTTGTGGTTGTTTTGGCAGTTCTTGT
TGTCTGTGTTGTTTCAACGGTAATTTAGAAGGAGAGACATGTTTTGATTT
GGATTATGTAAAGGGAGTTGTTGATGATGATGAGGAGGAGGAGGATGATG
ATGATGTTCTTGATCGGTTGCCAGTGGACCCTTTTGAACTAGATATAGAA
TCTACATTGGCAGCATTCTCAGATTGGATTGAGGATATTGAATGGGATTT
CCGACCAGAGGATGTAGAGTTTGGGGTGGGTGAAACACATGAAATGCGTG
GTGATCGTGATCATCTTCACTTTTTAGGTCTGAGTTGGGCTTGGAATGGC
CCTGAGAATTTGCAACCTCAGGGGGTTAGTTCTAGGGAGAATGAGATGTC
TGTTTCAGGTGATATTTTCAAAACGTATCAAAATTTTGATGGGGTATTTG
GTGGGGGCATTGTTGCTGAGGGAAGTGCAGGGGGGGTTCTGACGGTTAAG
CATGATGACAATTTGGTTTTAAGCACTGAAGCAGTGCAAAACGGCACCAA
AATTGAATGTGATGCTGAAAGAGGTGATCCACATGATGCTTTATTTTTTG
TGTTGGGTTATCTAGGTGTGCAGGACCTTCTCTCTGTTGAACGGGTCTGC
AGATCATTGCGTGATGCTGTTAAAGGTGATCCTTTGTTATGGAGAACTGT
GCAAATTAATCAGCAATTGAACGAAAAGATTACGGATGATACACTTGTAA
AGTTAACCAACAGAGCTCAAGGTACCCTTCAATGCCTGATCCTGGTGAAC
TGTTTATGGATCACTGATAGTGGTCTGCGAAGTGTCTTACAAAGCAACAC
TGGATTGATTAAGGTTAGTATTTGTAACATCATCGAAAACATAACATGTG
CACATATAATTTATTACTTGTTGACGATGCTTAAAACAAACATTGTAACC
CTGTTTTGCAATGCCTGCCACTATTGTAGTATCATTGGAATCATTTGTCT
GCAATTTCCCATAAAATCAAGGTCCACGACAAAAGTGACTTACACCTCCT
TTTAAAACCTTGCTTGAAGCTAACCCTACATCACTACCTTGCAGATTTGG
TGTTGTTTTTACTTAAGAACTTATGCTAACCTGTTGAATCTTGTTTAGTT
ATTTTAACTTTTCTTATACATAAAAACTTTCTCAAAAATATATCTTTTTG
GAACTATGGATTTTTCAAGTTGGTGCCTTGTATATTTTAGATTTCATGCT
GGCAGTATTTTGTATTATTTGTTGTAAATATATAATGATGTCAATGTACA
ATATCTTATGCCCTGGCCAATAAAAGCTAAGCTTTATTTTAATGTTTTCT
TACATCTTTGTAAGAAACATAAATTTTGAGGGGAACAATTGATGCATATA
TAACAATTTTATTCTGCTAGGAATCAAATTCTTCTATTGTGATTTGGCCT
CCTAGCCTACATCACACAATATTAGGAATCAAACTCCATGACAGTGATTC
TGAAACTAATTGTTTATCACTAGGCCAAGACGCAAAGTGTTGTAGTCAGA
GCGTTATAATTTGATTGTTACTTAACTCACATTGTTGCACATGCAATAAT
AAAGATGAATGTGCTCTACCATGCAAATGTACTCTTCAGCTGCTGGTCTG
TAATCAGAAGTGAATTGATGTAAAGCAGCCTACCATTTCATTTGCATGTT
TATGATAAAACATATTGTTGTCTATGTACATGATGTTTTGATAGCTTAAT
TTATATTGAAATGACATATTGTAGATATGTATGTGTATGTTTTGAAACTA
ACAAATTTGCGTACGTATCTTTTTCAGCTTAGTGTCCCAGATTGTATTAG
AATCACAATGGAGGGCATCTTATTCAACCTCAGGGCTCTTAAGTCATCTG
GAAAATCTGGTATAAAGCATTTACGAATTGGTGGGCTTGCTGGTATGTGT
CATGTGACTGACCAGCAGTTTGAAGAGTTAAAGGAATTACTGGATGCTGG
CAAGCATTTGCAACAGAGAGAACAGAAGCCGCAATTCTACTGTAGAGAGT
ATTCACATATCTTATGTGATGATGGCCGTCAAATTGACATAGATGTGTGT
CCAAAATGTAAGAAAGTGAGACCTATTTATGATTGTCCTGCTGAGAGTTG
TCAGCAGAAGCATCTGGCTGCTCAGCTCTGTAGAGGTTGCACTGTATGCA
TAACACGTTGCGTTCACTGTGGAAGATGCATTAAGGACATTTATGAAGAG
ACATTTTGTTTGGACTCTCTTTGTTTGAATTGTTTGGATCAGTTCCTGCA
TTATCCAGGGAAAGGGGAAAAAGAAGGTGCAGAATGTACTATTATTAGGG
AGAGGACCATGTATCAGTTTTGTCTCTATGGCTAGTGTCTGACATTCATG
ATCTTTTGACAAGACATTGGACCAGAATCTACACATTTGGCTCTGGTTTT
CTCTGTGCAAAGTTGAGGTGAGTGTGTGCACTATATCATTCGGTTGGGGA
AGTATTGTAATTCCTCAATAGCTGAGCAGTTGCATATCACAGAACTAATT
TTTCTTAAACAGTGATAAGGAACAAGAAAAAAGAGTTATGGAGGGGAAAG
TTAATTCAGATTGAATTTGAAAAACAGCAAAGTTAAAAAAAATACTCAGT
GTCGTATGTAGGTGGATCAAAGGAAAAGGAGGGGGAACTCTCATGTCCAA
GAGAAGTTTCATGATGTGATGCCTTCTGTGGTGAAATTGTTGTCCAAGTT
TATTGAAGTGAAGCAGATGCAGATTTTGCATATATGCAGATTTTTTATTC
AAAGCTGGGGTGAAAGACTCAGTTATTCTTGATTCAACAATGTGAGCTTA
TATGCAGATTTTTTATTCAATGCTGTGGTGAAAGACTCAGTTTTTTTGAT
TCAACTATGTGAGCTTGTATGCAGATTTTTCCTAACATGAGTGGCTTTGT
GGCATGGTGTCACCACCAAACTGTAGTGAAAATGGTGATGCTAAAGAAGG
GCAAGTGCTGGTACTTGCCATGGATCTTTTATCTGGATTTGTTTCATGGA
AGAAAAGGCCATTTTTTGTTAGTGTACTATGCTGCTTGTAACAAACCATC
ATCTTAGAGAGAAGAAACTACAATGTCAAGCAGAGTGATCTGGCATAACT
GGGGTTCTGAGAGAAATTGAAGGTTCTCCTGCAGCTTTGAATGCTGAAGC
AATAAATTCAACCATTGCCCTGCATGCAATGAGTCAGTTGTTTCAATGAT
GAAACCCTTCAATAAAAGAGTACCTTTTCCTCATTTTTTTGAATCAATGT
AACTTCCAGTTTCTGGAAATTGAGAAATTATCATTGTTGGTAGAAACAAT
TGATTTTATGAAAAAGAAAAGAGGAAGAGAAATTCCAAATTTATTAGTGG
T
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Coding sequence (CDS) from alignment at Chr04:7799745..7803395-

>Phvul.004G056900.1_Pv_G19833_v2.1 ID=Phvul.004G056900.1_Pv_G19833_v2.1; Name=Phvul.004G056900.1; organism=Phaseolus vulgaris; type=CDS; length=1497bp; location=Sequence derived from: Chr04:7799745..7803395- (Phaseolus vulgaris
ATGGCTTTTGATTCTTCTAAAGAATCTAGATTTTTGATTCCGCAAGAGAA
GAATTTGTGCCCCTCAAATGGGTCGGTGTTGGATGACCATTTGATCGACA
GTTGTGGTTGTTTTGGCAGTTCTTGTTGTCTGTGTTGTTTCAACGGTAAT
TTAGAAGGAGAGACATGTTTTGATTTGGATTATGTAAAGGGAGTTGTTGA
TGATGATGAGGAGGAGGAGGATGATGATGATGTTCTTGATCGGTTGCCAG
TGGACCCTTTTGAACTAGATATAGAATCTACATTGGCAGCATTCTCAGAT
TGGATTGAGGATATTGAATGGGATTTCCGACCAGAGGATGTAGAGTTTGG
GGTGGGTGAAACACATGAAATGCGTGGTGATCGTGATCATCTTCACTTTT
TAGGTCTGAGTTGGGCTTGGAATGGCCCTGAGAATTTGCAACCTCAGGGG
GTTAGTTCTAGGGAGAATGAGATGTCTGTTTCAGGTGATATTTTCAAAAC
GTATCAAAATTTTGATGGGGTATTTGGTGGGGGCATTGTTGCTGAGGGAA
GTGCAGGGGGGGTTCTGACGGTTAAGCATGATGACAATTTGGTTTTAAGC
ACTGAAGCAGTGCAAAACGGCACCAAAATTGAATGTGATGCTGAAAGAGG
TGATCCACATGATGCTTTATTTTTTGTGTTGGGTTATCTAGGTGTGCAGG
ACCTTCTCTCTGTTGAACGGGTCTGCAGATCATTGCGTGATGCTGTTAAA
GGTGATCCTTTGTTATGGAGAACTGTGCAAATTAATCAGCAATTGAACGA
AAAGATTACGGATGATACACTTGTAAAGTTAACCAACAGAGCTCAAGGTA
CCCTTCAATGCCTGATCCTGGTGAACTGTTTATGGATCACTGATAGTGGT
CTGCGAAGTGTCTTACAAAGCAACACTGGATTGATTAAGCTTAGTGTCCC
AGATTGTATTAGAATCACAATGGAGGGCATCTTATTCAACCTCAGGGCTC
TTAAGTCATCTGGAAAATCTGGTATAAAGCATTTACGAATTGGTGGGCTT
GCTGGTATGTGTCATGTGACTGACCAGCAGTTTGAAGAGTTAAAGGAATT
ACTGGATGCTGGCAAGCATTTGCAACAGAGAGAACAGAAGCCGCAATTCT
ACTGTAGAGAGTATTCACATATCTTATGTGATGATGGCCGTCAAATTGAC
ATAGATGTGTGTCCAAAATGTAAGAAAGTGAGACCTATTTATGATTGTCC
TGCTGAGAGTTGTCAGCAGAAGCATCTGGCTGCTCAGCTCTGTAGAGGTT
GCACTGTATGCATAACACGTTGCGTTCACTGTGGAAGATGCATTAAGGAC
ATTTATGAAGAGACATTTTGTTTGGACTCTCTTTGTTTGAATTGTTTGGA
TCAGTTCCTGCATTATCCAGGGAAAGGGGAAAAAGAAGGTGCAGAATGTA
CTATTATTAGGGAGAGGACCATGTATCAGTTTTGTCTCTATGGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001810F-box_dom
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding