Phvul.004G057800.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB20_ARATH (Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.947e-70 Identity = 101/141 (71.63%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPIEQKEKSGADKVK 423 MGRQPCCDKVGLK+GPWT EED KL+NFIL NG CWRAVPKL+GLLRCGKSCRLRW NYLRPDLKRG ++ EE +I LHS GNRWSKIASH PGRTDNEIKNHWNT IKK+L+ +G+DP T P+ EK + +K Sbjct: 1 MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPLTHKPLSIVEKEDEEPLK 141
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus OX=4151 GN=MYB315 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.321e-69 Identity = 125/267 (46.82%), Postives = 164/267 (61.42%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPIEQKEKSGADKVKTDMQPKSTSNGSDQGVENNKSLDMHATVXXXXXXXXXXXSRVKWDDTTGFFNNYEVLCSQLDLGSWMSQETKAXXXXXXXXXXXXXXXXXXXVDESSY---LQENSLQQWVEGLDSILSWDNFSPL 792 M RQPC +K GLKRGPWT EED KL +++L NGIQ WR +PKLAGL RCGKSCRLRW+NYLRPDLK+G TE+EE+QII+LH+ GNRWSKIA H PGRTDNEIKN+WNT IKK+LKLLG+DP P E K K+++D + SN D + ++ + + +K + T ++Y L DL S ++S S S S+ S ++S+ + E S++QWV+ +DS L WD F+ L Sbjct: 1 MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLKLLGIDPNNHQPFEHKGNVDETKIESDTK---ESNSQDM----KQIVNEVSRQGNNDQITESTSPEIKDEIVTSCQSDY--LMHNNDLMS-----NRSSNYYSPSFSMEESLSNPKSTGQTSFAVSIHEESMKQWVQSVDSKLPWDCFNQL 253
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.352e-66 Identity = 93/130 (71.54%), Postives = 112/130 (86.15%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPIE 390 MGR+PCC+KVGL+RGPWT EED KL++ I NNG+ CWRA+PKLAGLLRCGKSCRLRW NYLRPDLKRG F+E EE+ I+ LH+ GNRWS+IA+ PGRTDNEIKN+WNT++KKRL+ GLDP T +P+E Sbjct: 1 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQGLDPNTHLPLE 130
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.373e-65 Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPIEQKEKSGADKVKTDMQPKSTSNGSDQGVEN 477 MGRQPCCDK+G+K+GPWT EED KL++FIL NG CWRAVPKLAGL RCGKSCRLRW NYLRPDLKRG ++ EE +I LHS GNRWSKIA+ PGRTDNEIKNHWNT IKK+L +G+DP T P+ +KE + +D+ T+ SDQ EN Sbjct: 1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPL-KKEANLSDQPTTE---------SDQNKEN 149
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB17_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 6.736e-59 Identity = 87/129 (67.44%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPI 387 MGR PCCDK+GLK+GPWT EED L+ I NG WR +PKLAGLLRCGKSCRLRW NYLRPD+KRG FT EE +IQLH+ GNRW+ IA+ PGRTDNEIKN WNT +KKRL +GLDP T P+ Sbjct: 1 MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRTHEPL 129
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB41_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 7.386e-58 Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMP 384 MGR PCCDK G+K+GPWT EED KL+++I +G WR +PK AGL RCGKSCRLRW NYLRPD+KRG F+ EE+ IIQLHS GN+WS IA+ PGRTDNEIKNHWNT I+KRL G+DP T P Sbjct: 1 MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSGIDPVTHSP 128
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.146e-57 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMP 384 MGR PCCDK+GLK+GPWT EED KL+ +I +G WR++P+ AGL RCGKSCRLRW NYLRPD+KRG F EE IIQLH+ GNRWS IA+H P RTDNEIKN+WNT +KKRL +G+DP T P Sbjct: 1 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDPVTHKP 128
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.445e-57 Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFT 375 MGR PCCDK GLK+GPWT EED KL+ +I +G WR++P+ AGL RCGKSCRLRW NYLRPD+KRG FT EE IIQLH+ GNRWS IA+H P RTDNEIKN+WNT +KKRL +G+DP T Sbjct: 1 MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVT 125
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB15_ARATH (Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.573e-57 Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLK 351 MGR PCC+K+GLKRGPWT EED L++FILN+G WRA+PK AGLLRCGKSCRLRW+NYL+PD+KRG FT+ EED II LH GNRWS IA+ PGRTDNEIKN W+T +KKRL+ Sbjct: 1 MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNYLKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLE 117
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana OX=3702 GN=MYB4 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.257e-56 Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 1 Query: 1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIQCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEVEEDQIIQLHSCFGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPFTLMPIEQKEKSGADKVKTDMQPKSTS 450 MGR PCC+K +G WT EED +L+ +I +G CWR++PK AGLLRCGKSCRLRWINYLRPDLKRG FTE E++ II+LHS GN+WS IA PGRTDNEIKN+WNT I+++L G+DP + PI Q+ + D T ++P +++ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRGIDPTSHRPI-QESSASQDSKPTQLEPVTSN 149 The following BLAST results are available for this feature:
BLAST of Phvul.004G057800.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.004G057800.1_Pv_G19833_v2.1 >Phvul.004G057800.1_Pv_G19833_v2.1 ID=Phvul.004G057800.1_Pv_G19833_v2.1; Name=Phvul.004G057800.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=276bpback to top mRNA from alignment at Chr04:8031897..8033253+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.004G057800.1_Pv_G19833_v2.1 ID=Phvul.004G057800.1_Pv_G19833_v2.1; Name=Phvul.004G057800.1; organism=Phaseolus vulgaris; type=mRNA; length=1357bp; location=Sequence derived from: Chr04:8031897..8033253+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr04:8031897..8033253+ >Phvul.004G057800.1_Pv_G19833_v2.1 ID=Phvul.004G057800.1_Pv_G19833_v2.1; Name=Phvul.004G057800.1; organism=Phaseolus vulgaris; type=CDS; length=828bp; location=Sequence derived from: Chr04:8031897..8033253+ (Phaseolus vulgarisback to top |