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Transcript Overview
Name | Phvul.004G060500.1 |
Unique Name | Phvul.004G060500.1_Pv_G19833_v2.1 |
Type | mRNA |
Organism | Phaseolus vulgaris (Common bean) |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Phvul.004G060500.1 | Phvul.004G060500.1_Pv_G19833_v2.1-protein | Phaseolus vulgaris | polypeptide |
Phvul.004G060500.1_Pv_G19833_v2.1 | Phvul.004G060500.1_Pv_G19833_v2.1 | Phaseolus vulgaris | polypeptide |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Phvul.004G060500.1.v2.1.CDS.2 | Phvul.004G060500.1.v2.1.CDS.2_Pv_G19833_v2.1 | Phaseolus vulgaris | CDS |
Phvul.004G060500.1.v2.1.CDS.1 | Phvul.004G060500.1.v2.1.CDS.1_Pv_G19833_v2.1 | Phaseolus vulgaris | CDS |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.004G060500.1_Pv_G19833_v2.1 >Phvul.004G060500.1_Pv_G19833_v2.1 ID=Phvul.004G060500.1_Pv_G19833_v2.1; Name=Phvul.004G060500.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=313bp MSDSEESLERKTWIQKQENGSCKITLKHISNEKFRKTTFLRRKRGLMKKI SEFSKKCGGEHCLIVFDDDNGDVGPMTSPQNPVEVHSMIQKYYKSEIKNE RPHKTYGIEEFLENRKNMIETEISKVDKHISSIKYPTWDPSMIIMEEDQL RAFCAHVDAKIEACDRGIKLLKDQPQGFVSNMAQENAVATTSHPTQANYL QNISQSETLLDDFLKQLNDKSYGMVDFSSPVDVPLNSTNELSDLEFEELM MELSSWDWPYQACDDLVGCNNKVDESVLPSICVEYQGGGDLHALPPSLDV SDDYCNMFFLNV* back to topmRNA from alignment at Chr04:8481737..8483114- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Phvul.004G060500.1_Pv_G19833_v2.1 ID=Phvul.004G060500.1_Pv_G19833_v2.1; Name=Phvul.004G060500.1; organism=Phaseolus vulgaris; type=mRNA; length=1378bp; location=Sequence derived from: Chr04:8481737..8483114- (Phaseolus vulgaris ATGTCAGATTCAGAGGAAAGTTTAGAAAGGAAGACTTGGATTCAAAAACA
AGGTATGACACTGGACTATGAGATGCCACCCTGTTATGCTATTTGGAGTC
GGTGAAAGGGGGAAGTGAGTAGATAATATTCAATAAGGTAGGAGAAGTTT
TGTTTTCGGTGGCTTCTGCAACATAGATATTCTTAAAAACTGCAGATTGG
GCTTTTTGTGACAGCACATGCTGTTTTCTATCCAGGTGTAGGTATCTCTG
TTTTTCTAGGATACATGCGATGCTTCATGCTGATGTTTTTCTAGCTAAAC
TTTGTATTGTTTTTTCTATTGCTTTATTTTATGCATTGTATCTTAGATGA
CTTTCTTTGTATAAGGGTTGGGACACCCCTGAAGTGTCCCTTTTATTACA
TTAATTTGTTGCTGATAAAAAAAAAATTAAGTTGAATTTCTTTGTTTATT
GTTTCTTCTTGAATTTTTTTTGCCATATTTTGTTTTCTTAGAAAATGGGT
CGTGCAAAATAACCTTAAAACACATCTCAAATGAAAAATTTCGCAAGACA
ACTTTCTTGCGAAGAAAGAGAGGGCTAATGAAGAAGATCTCTGAATTTTC
CAAGAAGTGTGGTGGTGAACACTGTTTGATTGTGTTTGATGATGATAATG
GGGATGTTGGGCCAATGACTTCACCCCAAAACCCTGTAGAGGTACACTCC
ATGATTCAAAAGTATTATAAAAGTGAAATAAAGAATGAGAGACCTCACAA
GACTTATGGTATTGAAGAGTTTCTTGAGAATAGGAAAAACATGATTGAGA
CTGAGATTTCCAAAGTGGATAAACATATTAGCAGCATCAAGTATCCAACT
TGGGATCCAAGTATGATAATCATGGAAGAGGATCAATTGAGGGCCTTTTG
TGCTCATGTGGATGCCAAAATTGAAGCTTGTGATCGGGGAATTAAATTGT
TGAAGGATCAACCTCAAGGTTTTGTGTCAAACATGGCTCAAGAAAATGCT
GTTGCTACCACTTCACATCCAACCCAAGCCAATTACTTGCAAAACATCTC
TCAAAGCGAAACCCTTCTTGATGATTTCTTGAAGCAACTTAATGATAAGA
GTTATGGAATGGTAGATTTTAGTAGTCCAGTTGATGTGCCACTAAATTCA
ACCAATGAACTTAGTGACCTGGAGTTTGAGGAATTGATGATGGAACTTAG
TAGCTGGGATTGGCCTTATCAAGCATGTGATGATCTTGTGGGTTGTAACA
ATAAAGTTGATGAATCTGTCTTGCCAAGTATTTGTGTTGAATATCAAGGA
GGAGGAGATTTGCATGCCTTACCACCATCACTAGATGTATCAGATGATTA
TTGTAACATGTTTTTTCTGAATGTTTAA back to topCoding sequence (CDS) from alignment at Chr04:8481737..8483114- >Phvul.004G060500.1_Pv_G19833_v2.1 ID=Phvul.004G060500.1_Pv_G19833_v2.1; Name=Phvul.004G060500.1; organism=Phaseolus vulgaris; type=CDS; length=939bp; location=Sequence derived from: Chr04:8481737..8483114- (Phaseolus vulgaris ATGTCAGATTCAGAGGAAAGTTTAGAAAGGAAGACTTGGATTCAAAAACA AGAAAATGGGTCGTGCAAAATAACCTTAAAACACATCTCAAATGAAAAAT TTCGCAAGACAACTTTCTTGCGAAGAAAGAGAGGGCTAATGAAGAAGATC TCTGAATTTTCCAAGAAGTGTGGTGGTGAACACTGTTTGATTGTGTTTGA TGATGATAATGGGGATGTTGGGCCAATGACTTCACCCCAAAACCCTGTAG AGGTACACTCCATGATTCAAAAGTATTATAAAAGTGAAATAAAGAATGAG AGACCTCACAAGACTTATGGTATTGAAGAGTTTCTTGAGAATAGGAAAAA CATGATTGAGACTGAGATTTCCAAAGTGGATAAACATATTAGCAGCATCA AGTATCCAACTTGGGATCCAAGTATGATAATCATGGAAGAGGATCAATTG AGGGCCTTTTGTGCTCATGTGGATGCCAAAATTGAAGCTTGTGATCGGGG AATTAAATTGTTGAAGGATCAACCTCAAGGTTTTGTGTCAAACATGGCTC AAGAAAATGCTGTTGCTACCACTTCACATCCAACCCAAGCCAATTACTTG CAAAACATCTCTCAAAGCGAAACCCTTCTTGATGATTTCTTGAAGCAACT TAATGATAAGAGTTATGGAATGGTAGATTTTAGTAGTCCAGTTGATGTGC CACTAAATTCAACCAATGAACTTAGTGACCTGGAGTTTGAGGAATTGATG ATGGAACTTAGTAGCTGGGATTGGCCTTATCAAGCATGTGATGATCTTGT GGGTTGTAACAATAAAGTTGATGAATCTGTCTTGCCAAGTATTTGTGTTG AATATCAAGGAGGAGGAGATTTGCATGCCTTACCACCATCACTAGATGTA TCAGATGATTATTGTAACATGTTTTTTCTGAATGTTTAA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0046983 | protein dimerization activity |
GO:0003677 | DNA binding |
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