Phvul.004G102800.2
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Match: SLAH3_ARATH (S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1) HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0 Identity = 350/633 (55.29%), Postives = 432/633 (68.25%), Query Frame = 1
Query: 1 MENNTNIEIVEQGSPEVPSLIKYISSSEVAGFDT---SDFQFPSPSTK-----GSGAISQGRQN--------------NAPVVINHQRKYSISMPLSSEEVELPPLDTKTNRIPVSSSESGPATSNHPQASKCYSQPMPKGHVLQ-EAANRENI----------------------NNHPGIKAFKDKRFDSFKTWSGTLERQLTILRGKSPRATAQDGNDNPRSTERPLPVDRYFDALEGPELETLRASEETVLPQDRQWPFLLRFPISCFGVCLGVTSQAILWKALATSPSTQFLHISLKINLILWIISIALVAIIFTTYLLKMIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKDLHHALWYILMIPIFCLEIKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDNASRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATIRYSNQVTNGVTKXXXXXXXXXXXXXXXXXXXXXXXHAFVFKNLFPNDLVIAISDR---KRRPQRKWLGLYRSHESKEIENYLKFVNQDKF---DLEA 1746
ME N I Q E+P+L++ ++ E+ GFD + FP ++ S G++ N HQRK SISMP S + + T SSE+ + + ++ K SQPM K L E+ N ++ N + KD R++SFKTWSG LERQ T + S A + N+ +T +PVDRY+DALEGPELETLR EE VLP D++WPFLLR+PIS FG+CLGV+SQAI+WK LAT+ T+FLH+ L IN LW IS+AL+ I T YLLK+I +FEAVRREYYHPIR+NFFFAP+I+LLFLALGVPPS+ DL H LWY+LM P CLE+KIYGQWMSGGQRRLS+VANP+NHLSVVGNFVGALLGASMGL+EGPIFF+A+G+AHY+VLFVTLYQRLPTNETLPK+LHPVFFLFVAAPSVASMAWA + GSFD S++ YFIA+FLYFSLAVRINFFRG FSL+WWAYTFPMTGAAIATIRY+ V + +T+ +CV+L I+TL+V ALLV+TI+HAFV ++LFPNDL IAIS+R K+ Q +WL R+ S+ IENYLKF + D D+EA
Sbjct: 1 MEEKPNYVI--QVEEELPTLLRKATTEEMVGFDNYKENGHPFPHSISRFHPSHASTTTLNGQETSRSIDTMEAHHHNYNETTPWTHQRKPSISMPTSPNVLMISDPTTSL------SSENHKNSGSTGKSVKFLSQPMTKVSSLYIESGNGDDDRRQSHDNHHHHLHRQHQSGHHQNQNQAANKLKDNRYNSFKTWSGKLERQFT-RKPASVEPEAPNRNNQNLNTNEAMPVDRYYDALEGPELETLRPQEEIVLPNDKKWPFLLRYPISTFGMCLGVSSQAIMWKTLATAEPTKFLHVPLWINQGLWFISVALILTIATIYLLKIILFFEAVRREYYHPIRINFFFAPFISLLFLALGVPPSIITDLPHFLWYLLMFPFICLELKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALLGASMGLREGPIFFYAVGMAHYLVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASMAWAKVTGSFDYGSKVCYFIAIFLYFSLAVRINFFRGIKFSLSWWAYTFPMTGAAIATIRYATVVKSTMTQIMCVVLCAIATLVVFALLVTTIIHAFVLRDLFPNDLAIAISNRPRPKQNSQHRWLDQLRNVSSENIENYLKFTDSDSSQSNDVEA 624
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Match: SLAH2_ARATH (S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 296/490 (60.41%), Postives = 365/490 (74.49%), Query Frame = 1
Query: 328 KCYSQPMPKGHV-LQEAANRENINNHPGIKAFKDKRFDSFKTWSGTLERQLTILRGKSPRATAQDGNDNPRSTERPLPVDRYFDALEGPELETLRASEETVLPQDRQWPFLLRFPISCFGVCLGVTSQAILWKALATSPSTQFLHISLKINLILWIISIALVAIIFTTYLLKMIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKDLHHALWYILMIPIFCLEIKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDNASRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATIRYSNQVTNGVTKXXXXXXXXXXXXXXXXXXXXXXXHAFVFKNLFPNDLVIAISDRKRRPQRKWLGLYRSHESKEIENYLKFVN--QDKFDLEASTPLPNVTEDSPSI 1788
K +S+ MP+G + L + A+R F DKR+D F+T SG LERQ++ LRGK ++ QD + S L DRYFDAL+GPELETL+ E+ VLP+D+ WPFLLRFPI+ +G+CLGV+SQAI+WK LAT+ + +FLH++ IN +LW IS+ L+ + TYL K I +FEAVRRE+ HPIRVNFFFAP I++LFLALG+P S+ L LWY LM PI LE+KIYGQWMSGGQRRLSKVANP+NHLS+VGNF GALLGASMGLKEGPIFFFAIGLA+Y+VLFVTLYQRLPTNETLPKELHPVFFLFVAAP+VASMAW I SFD SR+AYFI+LFLYFSL RIN FRGF FSLAWWAYTFPMT A ATI+YS++VT TK L V++S +TL V+A+L T++HAFV ++LFPND+VIAIS + + Q++W E K ++ ++ DLE S PL NV DS ++
Sbjct: 44 KFHSKSMPRGAMFLDQEASRN----------FHDKRYDLFRTMSGKLERQISNLRGKPTESSLQDHKEITES----LTADRYFDALQGPELETLKEKEKIVLPEDKTWPFLLRFPITSYGMCLGVSSQAIMWKTLATTEAEKFLHVTQVINHVLWWISLLLLLAVSITYLFKTILFFEAVRREFRHPIRVNFFFAPLISILFLALGIPHSIISHLPSTLWYFLMAPILFLEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALLGASMGLKEGPIFFFAIGLAYYLVLFVTLYQRLPTNETLPKELHPVFFLFVAAPAVASMAWTKISASFDLGSRLAYFISLFLYFSLVCRINLFRGFKFSLAWWAYTFPMTAVASATIKYSDEVTGVATKILSVVMSGAATLTVIAVLGLTVMHAFVQRDLFPNDVVIAISAEQPK-QKRWFKHLTKESYGNNERCPKILDPEDNQIDLE-SPPLVNV--DSSTV 515
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Match: SLAC1_ARATH (Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 1.689e-149 Identity = 245/469 (52.24%), Postives = 322/469 (68.66%), Query Frame = 1
Query: 283 SSESGPATSNHPQASKCYSQPMPK-GHVLQEAANRENINNHPGIKAFKDKRFDSFKTWSGTLERQLTIL------RGKSPRATAQDGNDNPRSTERPLPVDRYFDALEGPELETLRASEETVLPQDRQWPFLLRFPISCFGVCLGVTSQAILWKALATSPSTQFLHISLKINLILWIISIALVAIIFTTYLLKMIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVT---KDLHHALWYILMIPIFCLEIKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDNASRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATIRYSNQVTNGVTKXXXXXXXXXXXXXXXXXXXXXXXHAFVFKNLFPNDLVIAISDRKRRPQRK 1659
S E+G + N + + +P+ G + IN G K F F+T S TL +Q ++L R +DG S + RYF AL GPEL+ ++ +E+ +LP++ QWPFLLRFPI CFG+CLG++SQA+LW ALA SP+T FLHI+ INL++W+ S+ ++ + TY+LK IFYFEAV+REY+HP+RVNFFFAPW+ +FLA+ VPP + K LH A+W + M P F LE+KIYGQW+SGG+RRL KVANPS+HLSVVGNFVGA+L + +G E F +A+G AHY+V+FVTLYQRLPT+E LPKELHPV+ +F+AAPS AS+AW I G FD SR +FIALFLY SL RINFF GF FS+AWW+YTFPMT A++ATI+Y+ V ++ L + LS IST +V L VST+LHAFV++ LFPNDL IAI+ RK ++K
Sbjct: 59 SLETGFSVLNRESRERDDKKSLPRSGRSFGGFESGGIINGGDGRKT----DFSMFRTKS-TLSKQKSLLPSIIRERDIENSLRTEDGETKDDSINENVSAGRYFAALRGPELDEVKDNEDILLPKEEQWPFLLRFPIGCFGICLGLSSQAVLWLALAKSPATNFLHITPLINLVVWLFSLVVLVSVSFTYILKCIFYFEAVKREYFHPVRVNFFFAPWVVCMFLAISVPPMFSPNRKYLHPAIWCVFMGPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWDEVAKFLWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAASIAWNTIYGQFDGCSRTCFFIALFLYISLVARINFFTGFKFSVAWWSYTFPMTTASVATIKYAEAVPGYPSRALALTLSFISTAMVCVLFVSTLLHAFVWQTLFPNDLAIAITKRKLTREKK 522
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Match: SLAH1_ARATH (S-type anion channel SLAH1 OS=Arabidopsis thaliana OX=3702 GN=SLAH1 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.536e-65 Identity = 113/283 (39.93%), Postives = 181/283 (63.96%), Query Frame = 1
Query: 679 FGVCLGVTSQAILWKALAT--SPSTQFLHI---SLKINLILWIISIALVAIIFTTYLLKMIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKD-LHHALWYILMIPIFCLEIKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDNASRIAYFIALFLYFSLAVRINFFRGFT--FSLAWWAYTFPMTGAAIATIRYSNQVTNGV 1503
F + L + SQA+LWK + SPS +H S+ +L+ ++ + V++ F Y LK IF+F+ V+ E+ H I VN+ +AP I+ L + P L+ L++I +P+ L+IK+YGQW + +R LS +ANP++ +SV+ N V A A MG E + F++G+ HY+V+FVTLYQRLP P +L P+FFLFVAAP++AS+AW +I G+FD +++ +F++LF++ SL R N F+ F++AWWAY+FP+T A+ +++Y+ +V + V
Sbjct: 46 FRISLSLCSQALLWKIMIAPESPSMSHMHSKLPSMAFHLLWYLALVTQVSLCFL-YALKCIFFFDKVKEEFLHYIGVNYLYAPSISWLLMLQSAPMMEPNSVLYQTLFWIFAVPVLTLDIKLYGQWFTTEKRFLSMLANPASQVSVIANLVAARGAAEMGWNECALCMFSLGMVHYLVIFVTLYQRLPGGNNFPAKLRPIFFLFVAAPAMASLAWNSICGTFDAVAKMLFFLSLFIFMSLVCRPNLFKKSMKRFNVAWWAYSFPLTFLALDSVQYAQEVKDPV 327
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Match: SLAH4_ARATH (S-type anion channel SLAH4 OS=Arabidopsis thaliana OX=3702 GN=SLAH4 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 5.404e-60 Identity = 109/282 (38.65%), Postives = 170/282 (60.28%), Query Frame = 1
Query: 679 FGVCLGVTSQAILWKAL----ATSPSTQFLHISLKINLILWIISIALVAIIFTTYLLKMIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKD-LHHALWYILMIPIFCLEIKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPIFFFAIGLAHYIVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDNASRIAYFIALFLYFSLAVRINFFRGFT--FSLAWWAYTFPMTGAAIATIRYSNQVTNGV 1503
F + L + SQA+LWK + + PS + +LW +++A + Y K IF F+ V+ E+ H I VN+ +AP I+ L L P L+ L++I +P+ L+ K+YGQW + +R LS +ANP++ +SV+ N V A A MG KE + F++G+ HY+V+FVTLYQRLP P L PVFFLF AAP+ AS+AW +I G+FD +++ +F++LF++ SL R N + F++AWWAY+FP+T A+ +++Y+ +V + V
Sbjct: 46 FRISLSLCSQALLWKIMVHLHSELPSMAYY--------LLWYLALATQVSLCFLYAFKCIFLFDMVKEEFSHYIGVNYLYAPSISCLLLLQSAPMIEPHSVLYQTLFWIFAVPVLTLDTKLYGQWFTTEKRFLSIMANPASQVSVIANLVAARGAAEMGWKECALCLFSLGMVHYLVIFVTLYQRLPGGNNFPTTLRPVFFLFFAAPATASLAWNSICGNFDTIAKMLFFLSLFIFISLVCRPNLLKKSIKRFNVAWWAYSFPITFLALNSVQYAQEVKDHV 319 The following BLAST results are available for this feature:
BLAST of Phvul.004G102800.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 5
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.004G102800.2_Pv_G19833_v2.1 >Phvul.004G102800.2_Pv_G19833_v2.1 ID=Phvul.004G102800.2_Pv_G19833_v2.1; Name=Phvul.004G102800.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=597bpback to top mRNA from alignment at Chr04:36269288..36273362- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.004G102800.2_Pv_G19833_v2.1 ID=Phvul.004G102800.2_Pv_G19833_v2.1; Name=Phvul.004G102800.2; organism=Phaseolus vulgaris; type=mRNA; length=4075bp; location=Sequence derived from: Chr04:36269288..36273362- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr04:36269288..36273362- >Phvul.004G102800.2_Pv_G19833_v2.1 ID=Phvul.004G102800.2_Pv_G19833_v2.1; Name=Phvul.004G102800.2; organism=Phaseolus vulgaris; type=CDS; length=1791bp; location=Sequence derived from: Chr04:36269288..36273362- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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