Phvul.004G169000.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUC_ARATH (Probable lactoylglutathione lyase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g67280 PE=1 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 3.268e-110 Identity = 145/207 (70.05%), Postives = 177/207 (85.51%), Query Frame = 1 Query: 121 FGLKASKFLRHDDDCMTTKASMNTSSAAAQENALDWVKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPE 741 FGL + K LR +C+ S + A Q++ L WVK+DKRRMLH VYRVGD+D+TIKFY ECLGMKLLRKRD+PE+++TNAFLGYGPED+HF +ELTYNYG+DKYDIG GFGHFG+A DD+++ VELV+AKGGK++REP VKG +VIA+IEDPDGY+FELLER P+PEPL +VMLRVGDLDR+IKFY+KAFGMELLRT+D+PE Sbjct: 46 FGLTSHKLLRRSVNCLGVAESGKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPE 252 HSP 2 Score: 120.168 bits (300), Expect = 7.363e-31 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 250 MLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQ 603 + + RVGDLD+ IKFY++ GM+LLR RD PE ++T A +GYGPED +ELTYNYG+ +YD G+ + + DD+ + E ++ GGKITREP + G ++ I DPDG++ Sbjct: 219 LCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITACLDPDGWK 336
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera OX=178616 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 1.428e-86 Identity = 117/179 (65.36%), Postives = 148/179 (82.68%), Query Frame = 1 Query: 211 ENA--LDWVKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPE 741 ENA ++W K DKRR LH VYRVGDLD+TI+FY EC GMK+LRKRD+PE++++NAFLG+GPE ++F VELTYNYG+ YDIG GFGHF ++ D+S++VE VRAKGG +TREP VKG SVIA+++DPDGY FEL++R P+PEPL +VMLRVGDLDR++KF +KA GM LLR + PE Sbjct: 3 ENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181 HSP 2 Score: 88.9669 bits (219), Expect = 9.474e-20 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 250 MLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAK----GGKITREPMLVKGSNSVIAYIEDPDGYQFELLE 618 + + RVGDLD+ +KF ++ LGM+LLR+ + PE +T +GY E +ELTYNYG+ +Y G+ + + DD+ + E+V+ GGKITRE + G + I DPDG++ L++ Sbjct: 148 LCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEY-NTIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVD 273
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica OX=39947 GN=GLYI-11 PE=1 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 6.327e-86 Identity = 118/188 (62.77%), Postives = 154/188 (81.91%), Query Frame = 1 Query: 181 SMNTSSAAAQENALDWVKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAK-GGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPE 741 + + + + E L+W K DK+R+LHAVYRVGDLD+TIK Y EC GMKLLRKRD+PE+++TNAFLG+GPED +FA+ELTYNYG+DKYDIG GFGHF +A +D+ ++ E +++ KITREP VKG ++VIA+ +DPDGY FEL++R P+PEPL +VMLRVGDLDRSIKFY+KA GM+LLR +D P+ Sbjct: 2 ASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPD 189 HSP 2 Score: 114.005 bits (284), Expect = 4.761e-29 Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 250 MLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDI---SRIVELVRAK-GGKITREPMLVKGSNSVIAYIEDPDGYQFELLERA 624 + + RVGDLD++IKFY++ LGMKLLRK+D+P+ ++T A LGY ED +ELTYNYG+ +Y G+ + + +D+ + VELV + GGKI R+P + G N+ IA DPDG++ L++ A Sbjct: 156 LCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNA 284
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: GLX1_ARATH (Lactoylglutathione lyase GLX1 OS=Arabidopsis thaliana OX=3702 GN=GLX1 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.084e-85 Identity = 116/180 (64.44%), Postives = 145/180 (80.56%), Query Frame = 1 Query: 202 AAQENALDWVKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPE 741 A + L+W K D RR LH VYRVGDLD+TI+FY E GMKLLRKRD+PE++++NAFLG+GPE ++F VELTYNYG+ YDIG GFGHF ++ D+S++VE VRAKGG +TREP VKG SVIA+++DPDGY FEL++R P+PEP +VMLRVGDLDR+IKFY+KA GM LLR + PE Sbjct: 2 AEASDLLEWPKKDNRRFLHVVYRVGDLDRTIEFYTEVFGMKLLRKRDIPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKLVENVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELIQRGPTPEPFCQVMLRVGDLDRAIKFYEKALGMRLLRKIERPE 181 HSP 2 Score: 94.3597 bits (233), Expect = 1.175e-21 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 256 HAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAK----GGKITREPMLVKGSNSVIAYIEDPDGYQFELLE 618 + RVGDLD+ IKFY++ LGM+LLRK + PE ++T +GY E +ELTYNY + +Y G+ + + DD+ + E+++ GGKITRE + G + I DPDG++ L++ Sbjct: 150 QVMLRVGDLDRAIKFYEKALGMRLLRKIERPEYKYTIGMMGYAEEYESIVLELTYNYDVTEYTKGNAYAQIAIGTDDVYKSGEVIKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVD 274
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri OX=623 GN=gloA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.665e-43 Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLER 621 R+LH + RVGDL ++I FY + LGMKLLR + PE +++ AF+GYGPE +ELTYN+G+DKY++G +GH L+ D+ + E +R GG +TRE VKG +VIA++EDPDGY+ EL+E Sbjct: 2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 126
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) OX=83333 GN=gloA PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.665e-43 Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLER 621 R+LH + RVGDL ++I FY + LGMKLLR + PE +++ AF+GYGPE +ELTYN+G+DKY++G +GH L+ D+ + E +R GG +TRE VKG +VIA++EDPDGY+ EL+E Sbjct: 2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 126
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 OX=83334 GN=gloA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.665e-43 Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLER 621 R+LH + RVGDL ++I FY + LGMKLLR + PE +++ AF+GYGPE +ELTYN+G+DKY++G +GH L+ D+ + E +R GG +TRE VKG +VIA++EDPDGY+ EL+E Sbjct: 2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 126
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=gloA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 8.107e-43 Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLE 618 R+LH + RVGDL ++I FY LGMKLLR + PE +++ AF+GYGPE +ELTYN+G++ YD+G+ +GH L+ D+ + E +R GG +TRE VKG +++IA++EDPDGY+ EL+E Sbjct: 2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi OX=90370 GN=gloA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 8.107e-43 Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLE 618 R+LH + RVGDL ++I FY LGMKLLR + PE +++ AF+GYGPE +ELTYN+G++ YD+G+ +GH L+ D+ + E +R GG +TRE VKG +++IA++EDPDGY+ EL+E Sbjct: 2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=gloA PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.537e-42 Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 247 RMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPL 642 ++LH + RVGDLD++IKFY++ LGM+LLR + PE ++T AFLGY ++ +ELTYN+G+DKY+ G +GH + DDI E VRA GG +TRE VKG ++VIA++EDPDGY+ E +E + L Sbjct: 2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133 HSP 2 Score: 52.7582 bits (125), Expect = 1.517e-7 Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 1 Query: 649 VMLRVGDLDRSIKFYQKAFGMELLRTQDDPE 741 MLRVGDLDRSIKFYQ GM LLRT ++PE Sbjct: 6 TMLRVGDLDRSIKFYQDVLGMRLLRTSENPE 36 The following BLAST results are available for this feature:
BLAST of Phvul.004G169000.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.004G169000.2_Pv_G19833_v2.1 >Phvul.004G169000.2_Pv_G19833_v2.1 ID=Phvul.004G169000.2_Pv_G19833_v2.1; Name=Phvul.004G169000.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=250bpback to top mRNA from alignment at Chr04:47241177..47244740- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.004G169000.2_Pv_G19833_v2.1 ID=Phvul.004G169000.2_Pv_G19833_v2.1; Name=Phvul.004G169000.2; organism=Phaseolus vulgaris; type=mRNA; length=3564bp; location=Sequence derived from: Chr04:47241177..47244740- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr04:47241177..47244740- >Phvul.004G169000.2_Pv_G19833_v2.1 ID=Phvul.004G169000.2_Pv_G19833_v2.1; Name=Phvul.004G169000.2; organism=Phaseolus vulgaris; type=CDS; length=750bp; location=Sequence derived from: Chr04:47241177..47244740- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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