Phvul.004G169200.1

Transcript Overview
NamePhvul.004G169200.1
Unique NamePhvul.004G169200.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr04supercontigChr04:47253324..47254877 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL152Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR243Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL029Pisum sativum Cameor genome v1aPisum sativum
pspvL451Pisum sativum Cameor genome v1aPisum sativum
pspvL826Pisum sativum Cameor genome v1aPisum sativum
pvvuR408Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR436Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL175Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL1054Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL738Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL609Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL792Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0086Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1209Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0140Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0141Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0866Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1155Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1159Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1162Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL294Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL372Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR425Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR435Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR436Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR451Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR472Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR434Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR448Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR468Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR402Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR426Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR428Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR366Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR381Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR404Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR493Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR523Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR524Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL435Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL589Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL764Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL027Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL305Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL444Cicer arietinum
carpvL592Cicer arietinum
carpvL788Cicer arietinum
ccapvL110Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL768Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL824Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR463Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR482Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR507Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR482Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR496Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR505Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR470Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR481Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR503Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR466Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR476Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR502Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR382Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR389Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR425Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR402Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR429Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun04g009700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat01G0116700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_013245Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g193100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan10g010100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.11G250500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004512969.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg55629.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_17532.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat1g045400.1Pisum sativum Cameor genome v1aPisum sativum
Psat5g022080.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.2g156880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigst.02G077100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.11G137300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.2g193600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Hedin2.R1.1g154760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_04506Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014653463.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr09.1767Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.02G100400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.1g119920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_11G01664.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun04g009700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_02G00825.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va10G001300.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg46856.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014645022.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr04.83Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004501109.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat05G0073900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun09g193100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr04.1013Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.009G109000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.004G169200Phvul.004G169200_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G169200.1Phvul.004G169200.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.004G169200.1_Pv_G19833_v2.1Phvul.004G169200.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G169200.1.v2.1.five_prime_UTR.1Phvul.004G169200.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G169200.1.v2.1.CDS.1Phvul.004G169200.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G169200.1.v2.1.three_prime_UTR.1Phvul.004G169200.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 1.145e-100
Identity = 203/439 (46.24%), Postives = 270/439 (61.50%), Query Frame = 1
Query:   16 VILFVLSILFLQVRAQSTAP--SGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRGSSASLGNQENLPT------FVRSRS---RFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVN-PEDHTTFTYSNSLRRLANQSGLGEESNLDIFVQREEEXXXXXXXXXXXXX--------XKMGKGVKEEELLIQKGAEDSDGNQKGYHKHNHMITISDVVFKHRWSNVSSSDLMFLNSEMLNATSSNRFSNFESNADLMSTPREVVENEQIK--NIKEEMERKISFESKVSALNNIKSVSEKDPPFTSDSAGNSSHAPKYVNPGEKRSISEITGVSRF-----GDLGMKMRVFKDSSSVQN--NLKEERMRQIWFPIAKRTAQWFVNRETRSQ 1245
            +  F L +L     AQ+  P  +GD V+NF+PSLAVV G+L +MF LTF LL+YAK C     S S   + +         F RS +   RFSG+DKT IESLP FRFS+LKGSK+GL+C+VCLSKFE VE+LRLLPKC+HAFHI CID WLE+H++CP+CR +V+  ED +  T  NS R L NQS + E+S+L+++++REEE     R  +  S         RK+ K   +E+ L+ +   D D  +K  HK NH I +SDVVFK+RWSNVSSSDLMFLNSEM+N+ SS RFS+ +         +   E +QI    IKEEME K   E+K++++  + S    D    S S          + PG +RS+S+IT V R      GD        + +S++QN  N  EER R++W PIA++TAQWF NRE RSQ
Sbjct:    4 IFFFFLPLLHSYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFL-NQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEKTLLDEHVNDKD-EKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFSSLDH-------VKRGDEEDQIGILRIKEEMEAKRMLENKLTSMTTMFSSENGDSGSKSRSV--------MIEPG-RRSVSDITAVPRLSISIHGDCSGS--AAETASALQNGGNETEERRRRLWLPIARKTAQWFANREKRSQ 422          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL12_ARATH (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 8.534e-91
Identity = 183/410 (44.63%), Postives = 240/410 (58.54%), Query Frame = 1
Query:   52 VRAQSTAPSGDAVSN--FQPSLAVVIGILGVMFLLTFFLLMYAKFCQH---RGSSASLGNQ---ENL--PTFVRSRSRFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNPEDHTTF--TYSNSLRRLANQSGLGEESNLDIFVQREEEXXXXXXXXXXXXXXKMGKGVKEEELLIQKGAEDSDGNQKGYHKHNHMITISDVVFKHRWSNVSSSDLMFLNSEMLNATSSNRFSNFESNADLMSTPREVVENEQIKNIKEEMERKISFESKVSALNNIKSVSEKDPPFTSDSAGNSSHAPKYVNPGEKRSISEITGVSRFGDLGMKMRVFKDSSSVQN----NLKEERMRQIWFPIAKRTAQWFVNRE 1233
            V AQS  P     ++  F+PSLA++ G+  ++F LTF LL+YAK C H   R  + S G +   + L    F RS SRFSG+DK  IESLPFFRFS+LKG K+GLEC+VCLSKFEDVE+LRLLPKC+HAFHI CID WLE+H++CP+CR++VN ED  +     S SLR L       E+S L+I+++REE           S F    K +K+  LL ++G E+ D  +K  HK NH I +SD VFK+RWSN++SSDL FL SEMLN+ SS+RFS+ +            V    +++ KE+ME K               +  KD                      +R++SEIT VSR   +G   R    S+S QN       EER R++W PIA+RTAQWFVNRE
Sbjct:   20 VSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAK-CFHNDLRSETDSDGERIRHDRLWQGLFNRS-SRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIYIEREE-----GTNDGSSRFSSFRKILKKSLLLEREGNENID-EKKLMHKFNHRIVVSDAVFKNRWSNITSSDLTFLTSEMLNSVSSDRFSSVDR-----------VHRGNLRD-KEDMEMKRML------------IKHKD--------------------SSRRTVSEITTVSREKAVGGSYRGSTASTS-QNYAVTATTEERRRRLWLPIARRTAQWFVNRE 376          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL43_ARATH (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.898e-38
Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1
Query:   88 VSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRGSSASLGNQENLP-----------TFVRSRSRFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNPED 489
             S+  P +AVVI +L   F LTF LL+Y K C+ R  S  + + +                V    + SGID++VIESLP FRF +L G K+GLECAVCL++FE  EVLRLLPKCKHAFH++C+D WL+ HS+CP+CR++V+PED
Sbjct:   51 TSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 195          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 9.710e-31
Identity = 67/160 (41.88%), Postives = 91/160 (56.88%), Query Frame = 1
Query:   16 VILFVLSILFLQVRAQSTAPSG-DAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRGSSASLGNQENLPTFVRSR-----SRFSGIDKTVIESLPFFRFSSLKGSKEG---LECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICR 468
            +IL V  I+  +  AQS +PS  D  +   PS   V  +L  +F LT  L +Y + C          N ++   + R+R     SR  G+D  V+ES P F +SS+K SK G   LECA+CL++ ED E +RLLP C H FHIDCID WL  H++CP+CR
Sbjct:   14 IILHVAIIIQSKANAQSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCAR-------SNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCR 166          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.941e-28
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = 1
Query:   76 SGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRGSSASLGNQENLPTFVRS-RSRFSGIDKTVIESLPFFRFSSLKG---SKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNP 483
            SGD+ S F P++A+++ +L  +F    F  +Y + C  R      GN  +   ++ + R +  G+D ++IE+ P F++S++K     KE LEC+VCL++FED E LRL+PKC H FH  CID WL  H++CP+CR  + P
Sbjct:   53 SGDS-SRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIP 191          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL34_ARATH (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.528e-25
Identity = 70/169 (41.42%), Postives = 91/169 (53.85%), Query Frame = 1
Query:   19 ILFVLSILFLQVRAQ----STAPSGDAVSNFQPSLAVVIGILGVMFLLTFFLLM------YAKFCQHRGSSASLGNQENLPTFVRSRSRFSGIDKTVIESLPFFRFSSLKG---SKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNPE 486
            ++F+L +L LQV  Q    +TAP   A    Q   AV+I +L  MF L F +L       Y     H  SS +         F R  SR  G+ K VI S P F +S +KG    K G+ECA+CL++FED E LRL+P C HAFH  CID WL   S+CP+CR  + P+
Sbjct:   14 VIFLL-LLVLQVSGQHQPRTTAPPYIAQRPNQVP-AVIIAML--MFTLLFSMLACCVCYKYTNTSPHGTSSDTEEGGHGEVAFTRRTSR--GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPK 176          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.161e-25
Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 1
Query:  115 VVIGILGVMFLLTFFLLMYAKFCQHR----GSSASLGNQENLPTFVRSRSRFS----GIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNPEDHTTFTYSNSLR-RLANQS 540
             +IGIL    +L  +  + +K+C HR     SS +L    N   F  S  R S    G+++++I+S+  +++ S  G  +G +C+VCLS+FE+ E LRLLPKC HAFH+ CID WL+ HS+CP+CR  V   ++ T +   ++   +ANQS
Sbjct:   60 ALIGILTSALILVSYYTLISKYC-HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQS 209          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.255e-24
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   16 VILFVLSILFLQVRAQSTAPSGDAV--SNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQ---HRGSSASLGNQENLPTFVRSRSRFSGIDKTVIESLPFFRFSSLKGSKEG---LECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICR 468
            V L +LS   L        P+          P++AV++ IL        F  +Y + C      G S + G +        +R    G+D +V+E+ P F +S +K  K G   LECA+CL++FED E LRLLPKC H FH  CID WLE H +CP+CR
Sbjct:   16 VFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAAR----GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.888e-24
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  118 VIGILGVMFLLTFFLLMYAKFCQH------RGSSASLGNQENLPTFVRSRSRFS-GIDKTVIESLPFFRFSSLKG---SKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICR-----HKVNPEDHTTFTYSNS 516
            V+ ++ V+FL+ FF++  + FC+       R S     + +     VR R   + G+D   IE+ P F +S +K     K G+ECAVCL +FED E LRL+P C H FH DC+D WL  HS+CP+CR     ++   +D +T +YS +
Sbjct:   51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGT 198          
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Match: ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.713e-23
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   91 SNFQPSLAVVIGILGVMFLLTFFLLMYAKFC-QHR---GSSASLGNQENLPTFVRSRSRFSGIDKTVIESLPFFRFSSLKG---SKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHSSCPICRHKVNP 483
            ++F P+ A+++ +L  +F     + +Y + C QH     S    GN  N    VR  +   G+D +VIE+ P F +S++K     KE LEC VCL++FED E LRL+P+C H FH  CID WL   ++CP+CR  + P
Sbjct:   33 TSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLN----VRQTTE-PGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVP 165          
The following BLAST results are available for this feature:
BLAST of Phvul.004G169200.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ATL42_ARATH1.145e-10046.24E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis t... [more]
ATL12_ARATH8.534e-9144.63Putative RING-H2 finger protein ATL12 OS=Arabidops... [more]
ATL43_ARATH1.898e-3850.34RING-H2 finger protein ATL43 OS=Arabidopsis thalia... [more]
ATL32_ARATH9.710e-3141.88RING-H2 finger protein ATL32 OS=Arabidopsis thalia... [more]
ATL11_ARATH1.941e-2840.00RING-H2 finger protein ATL11 OS=Arabidopsis thalia... [more]
ATL34_ARATH3.528e-2541.42RING-H2 finger protein ATL34 OS=Arabidopsis thalia... [more]
ATL52_ARATH6.161e-2539.07RING-H2 finger protein ATL52 OS=Arabidopsis thalia... [more]
ATL6_ARATH1.255e-2437.11E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis th... [more]
ATL9_ARATH6.888e-2437.84E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis th... [more]
ATL15_ARATH3.713e-2339.13E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 114..155
e-value: 3.8E-7
score: 39.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 113..156
e-value: 1.2E-12
score: 48.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 114..156
score: 12.622
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 88..165
e-value: 3.9E-22
score: 79.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..346
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 113..156
e-value: 1.25805E-21
score: 85.0461
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 93..162

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.004G169200.1_Pv_G19833_v2.1

>Phvul.004G169200.1_Pv_G19833_v2.1 ID=Phvul.004G169200.1_Pv_G19833_v2.1; Name=Phvul.004G169200.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=427bp
MNQLGVILFVLSILFLQVRAQSTAPSGDAVSNFQPSLAVVIGILGVMFLL
TFFLLMYAKFCQHRGSSASLGNQENLPTFVRSRSRFSGIDKTVIESLPFF
RFSSLKGSKEGLECAVCLSKFEDVEVLRLLPKCKHAFHIDCIDHWLERHS
SCPICRHKVNPEDHTTFTYSNSLRRLANQSGLGEESNLDIFVQREEEHHG
SSRFSVGSSFRKMGKGVKEEELLIQKGAEDSDGNQKGYHKHNHMITISDV
VFKHRWSNVSSSDLMFLNSEMLNATSSNRFSNFESNADLMSTPREVVENE
QIKNIKEEMERKISFESKVSALNNIKSVSEKDPPFTSDSAGNSSHAPKYV
NPGEKRSISEITGVSRFGDLGMKMRVFKDSSSVQNNLKEERMRQIWFPIA
KRTAQWFVNRETRSQQSLDKQLPLDL*
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mRNA from alignment at Chr04:47253324..47254877+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.004G169200.1_Pv_G19833_v2.1 ID=Phvul.004G169200.1_Pv_G19833_v2.1; Name=Phvul.004G169200.1; organism=Phaseolus vulgaris; type=mRNA; length=1554bp; location=Sequence derived from: Chr04:47253324..47254877+ (Phaseolus vulgaris
CAAAACGTAACCTGAGAAGAAACCAAGAAAACTGACATAAGGAAAGGTTG CCATTTGGGGAAGAATCATTGAATAATGTCCATGCACAACAACCCCATTA TAAATCCATAAGTCTTCAACTCATCAATTGTGAAACTTCTGCTGCAGAAT GCAAGAGGAGAACAAGAACTATGAATCAGCTTGGTGTTATCCTTTTTGTT CTTTCAATCTTGTTCCTACAAGTTAGAGCACAGAGTACTGCACCTTCAGG AGATGCTGTGTCCAATTTCCAGCCAAGCCTTGCTGTTGTCATAGGAATCC TTGGTGTCATGTTTCTACTGACATTCTTTCTTCTCATGTATGCAAAATTC TGTCAACACCGCGGCTCTTCAGCTTCTCTTGGGAACCAAGAAAATCTACC AACTTTTGTGAGATCAAGGTCTAGATTTTCAGGAATTGACAAGACTGTCA TAGAATCACTCCCCTTCTTTAGATTCTCTTCACTCAAAGGGTCAAAGGAA GGGCTGGAGTGTGCAGTGTGCTTATCAAAGTTTGAAGATGTTGAAGTTCT CAGACTTCTACCAAAGTGCAAGCATGCTTTTCATATTGATTGCATAGACC ACTGGCTTGAAAGGCACTCTAGCTGTCCTATTTGCAGGCACAAGGTCAAC CCTGAGGACCACACTACCTTCACATATTCAAACAGTTTAAGGAGGCTAGC AAACCAATCAGGTCTAGGTGAAGAATCTAACTTAGACATCTTTGTCCAGA GAGAAGAAGAGCATCATGGTTCATCAAGATTCAGTGTTGGAAGCAGCTTT CGGAAAATGGGAAAGGGTGTCAAGGAAGAAGAATTGCTCATCCAAAAAGG GGCAGAAGATAGTGATGGTAACCAGAAGGGGTATCATAAACACAACCACA TGATTACTATATCTGATGTTGTGTTCAAGCACAGGTGGAGCAACGTGAGT TCTTCAGACCTTATGTTTTTGAATTCAGAGATGCTGAATGCTACATCAAG CAACAGATTCAGCAACTTCGAATCAAATGCAGACTTGATGTCAACCCCCA GAGAGGTGGTAGAAAATGAGCAAATTAAGAACATCAAGGAGGAGATGGAG AGGAAAATTTCCTTCGAGAGCAAAGTTAGTGCACTAAACAACATCAAATC AGTTTCAGAAAAGGATCCTCCTTTTACATCAGATTCTGCAGGAAACTCAA GTCATGCACCAAAGTATGTGAACCCTGGTGAGAAAAGGTCAATATCAGAA ATCACTGGTGTCTCTAGATTTGGAGACTTAGGCATGAAAATGAGGGTCTT CAAGGACTCTTCTTCTGTTCAAAACAACCTTAAAGAGGAAAGAATGAGGC AGATTTGGTTTCCAATAGCTAAAAGAACAGCTCAATGGTTTGTGAATAGA GAAACAAGGTCTCAGCAATCTCTGGATAAACAACTACCATTAGATCTATA ACTCAATACAAATGTTTGGTTTCGGTCCTTGTTCAACAACTTCGTATAGA TTTTAGATTTTTTTGTTGAATAGTACACAGTTAAGCAAAGCAAGTACAGG TTCC
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Coding sequence (CDS) from alignment at Chr04:47253324..47254877+

>Phvul.004G169200.1_Pv_G19833_v2.1 ID=Phvul.004G169200.1_Pv_G19833_v2.1; Name=Phvul.004G169200.1; organism=Phaseolus vulgaris; type=CDS; length=1281bp; location=Sequence derived from: Chr04:47253324..47254877+ (Phaseolus vulgaris
ATGAATCAGCTTGGTGTTATCCTTTTTGTTCTTTCAATCTTGTTCCTACA
AGTTAGAGCACAGAGTACTGCACCTTCAGGAGATGCTGTGTCCAATTTCC
AGCCAAGCCTTGCTGTTGTCATAGGAATCCTTGGTGTCATGTTTCTACTG
ACATTCTTTCTTCTCATGTATGCAAAATTCTGTCAACACCGCGGCTCTTC
AGCTTCTCTTGGGAACCAAGAAAATCTACCAACTTTTGTGAGATCAAGGT
CTAGATTTTCAGGAATTGACAAGACTGTCATAGAATCACTCCCCTTCTTT
AGATTCTCTTCACTCAAAGGGTCAAAGGAAGGGCTGGAGTGTGCAGTGTG
CTTATCAAAGTTTGAAGATGTTGAAGTTCTCAGACTTCTACCAAAGTGCA
AGCATGCTTTTCATATTGATTGCATAGACCACTGGCTTGAAAGGCACTCT
AGCTGTCCTATTTGCAGGCACAAGGTCAACCCTGAGGACCACACTACCTT
CACATATTCAAACAGTTTAAGGAGGCTAGCAAACCAATCAGGTCTAGGTG
AAGAATCTAACTTAGACATCTTTGTCCAGAGAGAAGAAGAGCATCATGGT
TCATCAAGATTCAGTGTTGGAAGCAGCTTTCGGAAAATGGGAAAGGGTGT
CAAGGAAGAAGAATTGCTCATCCAAAAAGGGGCAGAAGATAGTGATGGTA
ACCAGAAGGGGTATCATAAACACAACCACATGATTACTATATCTGATGTT
GTGTTCAAGCACAGGTGGAGCAACGTGAGTTCTTCAGACCTTATGTTTTT
GAATTCAGAGATGCTGAATGCTACATCAAGCAACAGATTCAGCAACTTCG
AATCAAATGCAGACTTGATGTCAACCCCCAGAGAGGTGGTAGAAAATGAG
CAAATTAAGAACATCAAGGAGGAGATGGAGAGGAAAATTTCCTTCGAGAG
CAAAGTTAGTGCACTAAACAACATCAAATCAGTTTCAGAAAAGGATCCTC
CTTTTACATCAGATTCTGCAGGAAACTCAAGTCATGCACCAAAGTATGTG
AACCCTGGTGAGAAAAGGTCAATATCAGAAATCACTGGTGTCTCTAGATT
TGGAGACTTAGGCATGAAAATGAGGGTCTTCAAGGACTCTTCTTCTGTTC
AAAACAACCTTAAAGAGGAAAGAATGAGGCAGATTTGGTTTCCAATAGCT
AAAAGAACAGCTCAATGGTTTGTGAATAGAGAAACAAGGTCTCAGCAATC
TCTGGATAAACAACTACCATTAGATCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD