Phvul.005G109100.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MY102_ARATH (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 6.523e-91 Identity = 129/174 (74.14%), Postives = 143/174 (82.18%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSILRSAIGNVTPSFMNLQGLL--------GAQALMNPE 498 M R+PCC KNGLKKGPWT EED L +YI +G GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS +GNKWSAIAARLPGRTDNEIKN+WNTHIRK+LLRMGIDPVTH+PRLDLLD+SSIL S++ N + MN+ L+ L+NPE Sbjct: 1 MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLLRMGIDPVTHSPRLDLLDISSILASSLYNSSSHHMNMSRLMMDTNRRHHQQHPLVNPE 174
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB41_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.059e-83 Identity = 141/217 (64.98%), Postives = 167/217 (76.96%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSILRSAIGNVTPSFMNLQGLLGAQALMNPEFXXXXXXXXXXXXXNDHNPSNLVSQVQQINNNTGNCQMQNQ--VVPGQFQT 645 MGR+PCC+KNG+KKGPWT EED L +YI +GPGNWR LPKNAGL RCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS+MGNKWSAIAARLPGRTDNEIKN+WNTHIRKRL+R GIDPVTH+PRLDLLD+SS+L + P+F + A +L+NP+ L+LA+ L N PSNL +Q N ++ + Q Q + VP ++T Sbjct: 1 MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSGIDPVTHSPRLDLLDLSSLLSALFNQ--PNFSAVA--THASSLLNPDVLRLASLLLPLQNPNPVYPSNLDQNLQTPNTSSESSQPQAETSTVPTNYET 213
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB74_ARATH (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.860e-81 Identity = 116/130 (89.23%), Postives = 121/130 (93.08%), Query Frame = 1 Query: 1 MGRAPCC-NKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPR 387 MGR+PCC KNGLKKGPWTPEED L +YI+ +G GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLL+MGIDPVTH PR Sbjct: 1 MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKMGIDPVTHTPR 130
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB93_ARATH (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 2.521e-72 Identity = 100/133 (75.19%), Postives = 116/133 (87.22%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLL 399 MGR+PCC++NGLKKGPWTPEED L +YIH +G G+WR LPK A L RCGKSCRLRWTNYLRPDIKRG+FS EEE+TI+ LHSI+GNKWSAIA L GRTDNEIKN+WNTH++K+L++MGIDPVTH PR DL Sbjct: 1 MGRSPCCDENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLRWTNYLRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKLIQMGIDPVTHQPRTDLF 133
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.408e-70 Identity = 97/137 (70.80%), Postives = 118/137 (86.13%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSS 411 MGR+PCC+K GLKKGPWTPEED L YI +G G+WR+LP+ AGLQRCGKSCRLRWTNYLRPDIKRG+F+ +EE+TIIQLH+++GN+WSAIA LP RTDNEIKNYWNTH++KRL++MGIDPVTH + + L S+ Sbjct: 1 MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSST 137
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.139e-70 Identity = 95/129 (73.64%), Postives = 114/129 (88.37%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPR 387 MGR+PCC+K GLKKGPWTPEED L YI +G G+WR+LP+ AGL RCGKSCRLRWTNYLRPDIKRG+F+ +EE+TIIQLH+++GN+WSAIA LP RTDNEIKNYWNTH++KRL++MGIDPVTH P+ Sbjct: 1 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDPVTHKPK 129
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana OX=3702 GN=MYB39 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 2.632e-69 Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 1 Query: 1 MGRAPCCNKN-GLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLD----LLDMSSILRSAIGN 435 MGR+PCC+++ G+KKGPW PEED LT YI+ NG GNWR+LPK AGL RCGKSCRLRW NYLRPDI+RG+FS EE TI++LH+++GNKWS IA LPGRTDNEIKNYWNTH+RK+LL+MGIDPVTH PR + +LD+S +L +AI N Sbjct: 1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQMGIDPVTHEPRTNDLSPILDVSQMLAAAINN 150
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB92_ARATH (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 1.289e-67 Identity = 98/154 (63.64%), Postives = 122/154 (79.22%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSILRSAIGNVTPSFMNLQ 462 MGR+P + +GLKKGPWTP+ED L NY+ +G +WR LPK AGL RCGKSCRLRWTNYLRPDIKRGRFS +EE+TI+ LHS++GNKWS IA +LPGRTDNEIKN+WNTH++K+L++MG DP+TH PR D+ S L S N+ F++LQ Sbjct: 1 MGRSPISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHRPRTDIFSGLSQLMSLSSNLR-GFVDLQ 153
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB17_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.385e-67 Identity = 94/128 (73.44%), Postives = 110/128 (85.94%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAP 384 MGR PCC+K GLKKGPWTPEED +L +I NG G+WR LPK AGL RCGKSCRLRWTNYLRPDIKRG F+ +EE+ +IQLH+I+GN+W+AIAA+LPGRTDNEIKN WNTH++KRLL MG+DP TH P Sbjct: 1 MGRTPCCDKIGLKKGPWTPEEDEVLVAHIKKNGHGSWRTLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRTHEP 128
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Match: MYB53_ARATH (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.415e-66 Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 1 Query: 1 MGRAPCCNKNGLKKGPWTPEEDLILTNYIHTNGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLD 393 MGR+P ++ GLKKGPW PEED L NYIH +G +W LPK AGL RCGKSCRLRWTNYLRPDIKRG+FS EEEETI+ LH+++GNKWS IA+ LPGRTDNEIKN+WNTH++K+L++MG DP+TH PR D Sbjct: 1 MGRSPSSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTD 131 The following BLAST results are available for this feature:
BLAST of Phvul.005G109100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.005G109100.1_Pv_G19833_v2.1 >Phvul.005G109100.1_Pv_G19833_v2.1 ID=Phvul.005G109100.1_Pv_G19833_v2.1; Name=Phvul.005G109100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=324bpback to top mRNA from alignment at Chr05:33128767..33130082+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.005G109100.1_Pv_G19833_v2.1 ID=Phvul.005G109100.1_Pv_G19833_v2.1; Name=Phvul.005G109100.1; organism=Phaseolus vulgaris; type=mRNA; length=1316bp; location=Sequence derived from: Chr05:33128767..33130082+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr05:33128767..33130082+ >Phvul.005G109100.1_Pv_G19833_v2.1 ID=Phvul.005G109100.1_Pv_G19833_v2.1; Name=Phvul.005G109100.1; organism=Phaseolus vulgaris; type=CDS; length=972bp; location=Sequence derived from: Chr05:33128767..33130082+ (Phaseolus vulgarisback to top |