Phvul.005G109600.1

Transcript Overview
NamePhvul.005G109600.1
Unique NamePhvul.005G109600.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05supercontigChr05:33252292..33254387 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL109Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvR247Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL467Pisum sativum Cameor genome v1aPisum sativum
pspvL483Pisum sativum Cameor genome v1aPisum sativum
pvvuR481Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR493Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0048Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL073Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL043Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL064Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL526Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL754Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL618Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0366Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1034Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0666Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0868Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1224Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL160Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL212Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL699Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR469Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR490Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR481Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR528Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR475Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR478Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR524Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR445Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR449Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR417Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR429Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR437Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR447Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR535Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR566Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL037Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL064Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL066Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL599Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL090Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL130Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL669Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL679Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL048Cicer arietinum
carpvL053Cicer arietinum
carpvL065Cicer arietinum
carpvL598Cicer arietinum
ccapvL124Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL139Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL482Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL778Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR516Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR536Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR537Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR558Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR528Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR523Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR533Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR535Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR559Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR524Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR534Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR536Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR561Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR444Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR452Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR457Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR460Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR469Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014638079.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan09g252000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_00226Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.06G141600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_022787276.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_03078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg43931.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_09708.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun05g221200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_022446Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_06G00929.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan05g154300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_014175Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_00806.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.07G068300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va05G044810.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun05g221200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr05.2122.1.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_14124Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va08G053600.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va09G061460.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_05G00258.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g052080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_27373Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_19981.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.07G091200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va05G037870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr06.2100Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan08g123300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.05G033100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004487291.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_07G00735.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.06G135700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058924006.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.05G025900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun11g111200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan05g129900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004487589.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Tiffany.R1.1g034960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_09036Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_23912.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun11g111200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr11.1084Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat05G0744200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.728Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.011G110000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr11.1000697Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.005G109600Phvul.005G109600_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G109600.1Phvul.005G109600.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.005G109600.1_Pv_G19833_v2.1Phvul.005G109600.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G109600.1.v2.1.five_prime_UTR.1Phvul.005G109600.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G109600.1.v2.1.CDS.1Phvul.005G109600.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G109600.1.v2.1.CDS.2Phvul.005G109600.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G109600.1.v2.1.CDS.3Phvul.005G109600.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G109600.1.v2.1.CDS.4Phvul.005G109600.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G109600.1.v2.1.CDS.5Phvul.005G109600.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G109600.1.v2.1.CDS.6Phvul.005G109600.1.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G109600.1.v2.1.three_prime_UTR.1Phvul.005G109600.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD61_ARATH (Putative cyclin-D6-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD6-1 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.310e-82
Identity = 141/310 (45.48%), Postives = 200/310 (64.52%), Query Frame = 1
Query:    1 MDFNLENPLG------NFHD-LPWDALP-SLFLIESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLSCTFD-PVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLK--DPAF-RQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQ--DIAREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKIT 888
            M+F+LE+PL       NF+D   ++ LP SLFL+E  H+P  +Y  +LK+S F +S R   +S I+Q S  FD P L YLA+NYLDRFL+++ + Q KPW  KL+++SC SL+AKM K + S +D+ V       G  F+ Q ++RME ++LGAL+WRMRS+TPFSF+ FF+ LF LK  DP   +  LK + S++    Q +I  LEFKPS++A +ALL+AS EL P Q+PCF   I+ C+YVNK+ +++CY  IQ  DI   E E       +++T VNVLD+ F S ES+K+  +      KRRK +
Sbjct:    1 MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMSVSDLPV------EGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYVNKDELMECYKAIQERDIIVGENE------GSTETAVNVLDQQFSSCESDKSITITASSSPKRRKTS 298          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD61_ORYSJ (Cyclin-D6-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD6-1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.806e-36
Identity = 109/304 (35.86%), Postives = 162/304 (53.29%), Query Frame = 1
Query:    4 DFNLENPLGNFHDLPWDALPSLFLIESDHIPPPNYCQTLKASDFDISVRRNVVSLISQL----SCTFDPVLPYLAINYLDRFLANQGI-LQPKPWANKLLAISCFSLAAKMLKAEY-SATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLF--RLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQDIAREEYESVLNINSTSDTPVNVLDEH-FLSLESEKTNGV---IQEQEFKRR 879
            +F+LENP  +  D P   + SL   E  H P          S    + RR     IS++         P + YLA+NY+DR+L+ + +  +  PWA +LLAISC +LAAKM +A   SA D+Q     GE   +F+   +QRME +VL AL+WR RS+TP +F+ FF+     + + PA    +K RA +++L+ Q E+K+ EF PS+ AA+ALL A+ E+       F   ++ C +VN E + +C  V+   A     S     ++++TPV VL  H   S ESE+T  V       + KRR
Sbjct:   19 EFDLENPFTSPADEP---IASLLDAEGHHSP--------SVSAAASAARREAAGFISKVRYDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ----RGEE-FMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLRECGEVMA-AACGVGPSWAAAATSAETPVTVLGHHRSASSESERTTTVGSAANSADAKRR 305          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.320e-33
Identity = 85/248 (34.27%), Postives = 134/248 (54.03%), Query Frame = 1
Query:   46 PWDALPSLFLIESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLSC--TFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGV--VFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPA--FRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHEL-------FPFQYPCFLRAISDCSYVNKETVVQCYNVIQDIARE 750
            P D++      E   +P  +Y    +    D S R + V+ I ++     F P+  YLA+NY+DRFL  + + +   W  +LLA++C SLAAKM         V  L +    GV  +FE +T++RME +VL  L WR+RS+TPF FI FF   +++ DP+  F       A+EIIL + +E   LE+ PS +AA+A+L  ++EL        P + P      + C  ++KE +V+CY +++ +A E
Sbjct:   48 PGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKM-----EEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFA--YKI-DPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESP-----ETWCDGLSKEKIVRCYRLMKAMAIE 282          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.372e-33
Identity = 86/231 (37.23%), Postives = 130/231 (56.28%), Query Frame = 1
Query:   67 LFLIESDHIPPPNYCQTLKAS----DFDISVRRNVVSLISQLSC--TFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSAT-DVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKD-PAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQ 735
            L   E+DH+P  +Y + L+A     D D+ VR + +  I ++    +F P+   LA+NYLDRFL+   +   K W  +LLA++C SLAAKM + +   + D+QV    GE   VFE +T+QRME +VL  L+WRM+++TPFS++ +F+      D P+ R  L   +SE+IL   R  + L F+PS +AA+       E    ++  F       S+VNKE +  C  VIQ
Sbjct:   72 LVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQV----GEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALL--SSELILCIARGTECLGFRPSEIAAAVAAAVVGE----EHAAF-------SHVNKERMSHCQEVIQ 285          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.138e-33
Identity = 90/288 (31.25%), Postives = 153/288 (53.12%), Query Frame = 1
Query:   79 ESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLSC--TFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSY-VNKETVVQCYNVIQDIAREEYESVLNINSTSD---TPVNVLDEHFLSLESEKTN-GVIQEQEFKRRKITDYGNKHTVPFS 921
            E DH P   Y + L+    + S R++ +  I ++     F P+  YLA+NYLDRFL++  +   + W  +LL++SC SLA KM   E +   + + L   +   VFE + ++RME IV+  L+WR++++TPFSFI +F+D F    P     L    S++ + + ++ + L F+PS +AA+ +L    E    Q+  F  A+ +    VNKE V++CY ++  + +   + + N N++S    +P+ VLD    S  S+ T  G  Q     +    DY ++ + P S
Sbjct:   72 EMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKM---EETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPP-SYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAE---NQFLVFNSALGESEIPVNKEMVMRCYELM--VEKALVKKIRNSNASSSVPHSPITVLDAACFSFRSDDTTLGSSQSNSNNK----DYNSQDSAPAS 346          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.348e-32
Identity = 76/193 (39.38%), Postives = 115/193 (59.59%), Query Frame = 1
Query:   79 ESDHIPPPNYCQTLKASDFDISV-RRNVVSLISQLSC---TFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSA-TDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHEL 642
            E  H+P  +Y + L++ D D++V RR+ ++ I + +C    F P+   LA+NYLDRFL+   +   K W  +LLA++C SLAAK+ + E     D+QV    G+   VFE ++VQRME +VL  L+WR+R+ITP S+I +F+      D      L  R+ ++I  + + I  LEF+PS VAA+  L  S EL
Sbjct:   54 EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWK-ACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQV----GDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGEL 241          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.134e-31
Identity = 95/301 (31.56%), Postives = 146/301 (48.50%), Query Frame = 1
Query:   52 DALPSLFLIESDHIPPPNYCQTLKAS--DFDISVRRNVVSLISQLSC--TFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQDIAREEYESVLNINSTSDTPVN-------------------VLDEHFLSLESEKTN-GVIQEQEFKRRK 882
            + + SL   E  H+P  +Y + L+    D D+ VR   +  I ++     F  V  YLA+NYLDRFL+   + + + W  +LL+++C S+AAKM   E +     + L  GE   +FE +T+ RME +VL  L WRM+++TPFS+I +F+      + A R  L  R+SE+IL+       LEF+PS +AA+     + E           A    ++V+K  V+QC   IQD     + S+  IN+    P +                   VLD   LS +S+ T+   I      RRK
Sbjct:   76 ECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKM---EETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLL-RSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAF---THVDKGRVLQCQEAIQD----HHYSMATINTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSYKSDDTDAATIASHGGGRRK 365          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.423e-30
Identity = 87/277 (31.41%), Postives = 145/277 (52.35%), Query Frame = 1
Query:   52 DALPSLFLIESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLSCT--FDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEY-SATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCF--LRAISDCSYVNKETVVQCYNVIQDIAREE---------YESVLNINSTSDTPVNVLDEHFLSLESEK 840
            D +  + + E +  P  +Y + L + D D+SVR   +  I ++     F  +   L++NYLDRFL +  + + K WA +LLA+SC SLA+KM + +     D+QV     +   VFE +T++RME +V+  L WR++++TPFSFI +FVD          + L  R+S  IL + + I+ L+F+PS     A   A       +  C    +A+S   YV +E V +C N+++ +  EE          ++ + + +   +PV VL+   LS  SE+
Sbjct:   65 DRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQV----EDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI---SGHVSENLIYRSSRFILNTTKAIEFLDFRPS---EIAAAAAVSVSISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEATCLSYRSEE 331          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.104e-28
Identity = 74/224 (33.04%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   79 ESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLS--CTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEY-SATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQDI 741
            E+++ P  +Y   L++   D + R   VS I ++     F P+  YLA+NY+DRFL+ + + + + WA +LLA++C SLAAKM +    S  D+QV  +      VFE +T+ RME ++L AL WR+RS+TPF+FI FF               K  ++ ++  +  +I+ L+  PS +AA+A+L A+ E     +     A++ C  + +E +  CY ++Q +
Sbjct:   59 EAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSR----YVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFF-------------ACKHISNAMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQL 265          
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.769e-28
Identity = 91/267 (34.08%), Postives = 140/267 (52.43%), Query Frame = 1
Query:   79 ESDHIPPPNYCQTL--KASDFD-ISVRRNVVSLISQLS--CTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQD------IAREEYESVLNINSTSDTPVNVLD-EHFLSLESEKT 843
            E  HIP   Y Q L  +    D ++VR + +  I ++     F P+   L++NYLDRFL+   + Q +    +LLA++  SLAAKM   E +     + L   +   VFET+T++RME  VL AL+WRM+++T  SFI +++  F   D      L  R+ ++IL + +  + L F+PS +AAS  L A  E    +   F R  +    + KE V++CY +IQD      I R+   SV +I     +P+ VLD    +S +SE T
Sbjct:   64 EQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKM---EETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALS-RSVDLILSTCKVAEFLVFRPSEIAASVALVALEE---HETSMFERVATCYKNLKKERVLRCYEMIQDKIIMRNIMRQSAGSVFSIPK---SPIGVLDAAACISQQSEDT 320          
The following BLAST results are available for this feature:
BLAST of Phvul.005G109600.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CCD61_ARATH3.310e-8245.48Putative cyclin-D6-1 OS=Arabidopsis thaliana OX=37... [more]
CCD61_ORYSJ1.806e-3635.86Cyclin-D6-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCD11_ARATH1.320e-3334.27Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCD41_ORYSJ2.372e-3337.23Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCD22_ORYSJ3.138e-3331.25Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=399... [more]
CCD41_ARATH3.348e-3239.38Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCD42_ORYSJ1.134e-3131.56Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=399... [more]
CCD21_ARATH1.423e-3031.41Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCD21_ORYSJ2.104e-2833.04Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCD31_ORYSJ2.769e-2834.08Cyclin-D3-1 OS=Oryza sativa subsp. japonica OX=399... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 51..144
e-value: 0.0047
score: 26.1
coord: 157..246
e-value: 4.7
score: 3.8
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 153..244
e-value: 0.00149891
score: 34.9069
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 50..143
e-value: 1.95369E-7
score: 46.0777
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 153..268
e-value: 7.7E-4
score: 28.8
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 153..251
e-value: 1.6E-10
score: 41.1
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 27..150
e-value: 1.0E-14
score: 54.4
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 68..250
e-value: 6.1E-8
score: 30.1
NoneNo IPR availableGENE3D1.10.472.10coord: 20..242
e-value: 2.4E-34
score: 120.6
NoneNo IPR availableGENE3D1.10.472.10coord: 33..151
e-value: 2.4E-34
score: 120.6
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 13..150
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 134..249

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.005G109600.1_Pv_G19833_v2.1

>Phvul.005G109600.1_Pv_G19833_v2.1 ID=Phvul.005G109600.1_Pv_G19833_v2.1; Name=Phvul.005G109600.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=313bp
MDFNLENPLGNFHDLPWDALPSLFLIESDHIPPPNYCQTLKASDFDISVR
RNVVSLISQLSCTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISC
FSLAAKMLKAEYSATDVQVLLNHGEGGVVFETQTVQRMEGIVLGALQWRM
RSITPFSFIPFFVDLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPS
IVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQDIARE
EYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKITDYGN
KHTVPFSHFHQC*
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mRNA from alignment at Chr05:33252292..33254387+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.005G109600.1_Pv_G19833_v2.1 ID=Phvul.005G109600.1_Pv_G19833_v2.1; Name=Phvul.005G109600.1; organism=Phaseolus vulgaris; type=mRNA; length=2096bp; location=Sequence derived from: Chr05:33252292..33254387+ (Phaseolus vulgaris
CCTTTAACCAAGACCAACTTCACAAAACAGACTTGTTTCGAGTCCATGGA TTTTAACCTCGAAAACCCTCTTGGAAACTTCCACGACCTTCCATGGGATG CTCTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCACCCAAT TACTGTCAAACTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAAA TGTTGTCTCTTTGATTTCACAGGTAATCCAGCACCAACGAAATTCACTTT CTTTGACAAAGACAAATATCCAGTTTTGGTGTTTTGTTTCTCAACGTGGT TTCTTGCTTGTTTCGTTTCTCTTCAGTTGTCCTGCACTTTCGATCCAGTT CTTCCTTACCTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAGG AATATTGGTAACTAGCTAAACCAAACAGCTTGTTCATAATTTACCCCACT TTGTTTAATGCTTAGTTTCAAAGGGTATGTAACTGGAGTATCAATCTTTT TGGAAATACCACAGAAATTGTGGTCACATTTGTTTACAATATCGACATGA TTTCTTGCAATTTCAAGGATTGTAATGAAATTGTTAAGGCAAAGGAAATT TAAAACATTAGTTTTGTACCAATAAAAAAAAAGTATGCCCTCTTAAGATG TAACGAAAACTGGGTTTGTGCAACAGCAACCAAAGCCATGGGCAAACAAG CTTCTTGCAATATCTTGCTTTTCTTTAGCGGCCAAGATGTTGAAAGCAGA ATACTCTGCCACTGACGTCCAGGTAAACTGTTTGAGCATCCTAAGGCTTT GAATCTTTTTCTTGAATTGAAATTAACTAGTATTGCTTGTGACCAGGTTC TGCTGAATCATGGTGAAGGAGGTGTAGTTTTTGAGACACAAACAGTTCAA AGAATGGAGGGCATTGTCTTGGGGGCTCTCCAGTGGCGAATGCGTTCGAT CACCCCCTTTTCTTTCATTCCCTTCTTCGTGGATTTGTTCAGGCTCAAAG ACCCGGCATTTAGGCAGGTTTTGAAGGATCGAGCATCTGAAATCATTCTA AAGTCACAAAGAGGTATAACCATAGTTAATGCTGAATTGACTAGAACATT GTAAGTTAAATGAGTTAATTTGATTGCTAATCCAGGATTAGAGTTAAATA ATGTTTGATATTTCACTTTACTTTTCAGAGATAAAGGTCTTGGAATTCAA GCCATCTATAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGT TTCCCTTTCAATATCCATGCTTCTTAAGAGCAATATCCGACTGTTCGTAT GTTAACAAAGTACACATCTTTCATTCTTTTCATTTTTCTTTTATCGACAT ATATGGTAAAATGAATGGTGAAAAACAAAATTTTTTATACCATTATTGAT ACTATTATGTGGATAACAGAGGGTACGATGATTTTACTGTAGGAAACTGT GGTGCAATGTTATAATGTGATACAGGACATAGCCAGGGAGGAGTACGAAT CTGTGTTGAATATAAATTCAACTTCAGACACACCGGTTAATGTGTTAGAC GAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGGGTGATACAAGA GCAGGAGTTCAAAAGAAGGAAAATCACCGATTATGGCAACAAACACACGG TCCCGTTTTCTCATTTTCATCAATGCTGAAGTACCAGAAGAAGAACACAT TTAATCCTCTGGTCCATCCAACAGCGATTAATGTCGTTGGAAATATCACA TTGTCCTGGCTTAACAAAAAAAAAACGAGGAAAACCAATGGAGAACACAA TAATAGGAAGAGACACTGATGGACTCAGAATGAGAAGAGAAGAATTCGAT GATCCGTAGTTAGTGGACAAAATCACTGTAACGTGATCCGGTACGGCCTT CATTAAATCTGTTGGTTGTGTAAAGGAACATCGTGATAAGATGGGATTTT TTTTTTGTTTCCTAGGAGAAAAAAAAACAAAACGACAAAACATGACTTTG AATTGTAGGGTTGAGGTTTTGTTTTTTGTTTTTTTTTTCATGTTTAAGCA ACCAATCTTCTTAAAAAAAATAAAATATAGCACTTTTATTAATGTA
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Coding sequence (CDS) from alignment at Chr05:33252292..33254387+

>Phvul.005G109600.1_Pv_G19833_v2.1 ID=Phvul.005G109600.1_Pv_G19833_v2.1; Name=Phvul.005G109600.1; organism=Phaseolus vulgaris; type=CDS; length=939bp; location=Sequence derived from: Chr05:33252292..33254387+ (Phaseolus vulgaris
ATGGATTTTAACCTCGAAAACCCTCTTGGAAACTTCCACGACCTTCCATG
GGATGCTCTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCAC
CCAATTACTGTCAAACTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGA
AGAAATGTTGTCTCTTTGATTTCACAGTTGTCCTGCACTTTCGATCCAGT
TCTTCCTTACCTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAG
GAATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAATATCTTGC
TTTTCTTTAGCGGCCAAGATGTTGAAAGCAGAATACTCTGCCACTGACGT
CCAGGTTCTGCTGAATCATGGTGAAGGAGGTGTAGTTTTTGAGACACAAA
CAGTTCAAAGAATGGAGGGCATTGTCTTGGGGGCTCTCCAGTGGCGAATG
CGTTCGATCACCCCCTTTTCTTTCATTCCCTTCTTCGTGGATTTGTTCAG
GCTCAAAGACCCGGCATTTAGGCAGGTTTTGAAGGATCGAGCATCTGAAA
TCATTCTAAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCT
ATAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTT
TCAATATCCATGCTTCTTAAGAGCAATATCCGACTGTTCGTATGTTAACA
AAGAAACTGTGGTGCAATGTTATAATGTGATACAGGACATAGCCAGGGAG
GAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACACCGGTTAA
TGTGTTAGACGAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGGG
TGATACAAGAGCAGGAGTTCAAAAGAAGGAAAATCACCGATTATGGCAAC
AAACACACGGTCCCGTTTTCTCATTTTCATCAATGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR006670Cyclin
IPR036915Cyclin-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus