Phvul.005G117866.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: Y2179_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282179 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.961e-16 Identity = 41/136 (30.15%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 34 LLCLFILTLSFAHAQATTFGYC-ADVNYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYF---GFVVHKEIH-DFCEEVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITF 426
+L L I + + YC ++N K++ + + PDP + + VT + + E I G + VA+F G+ H D C+ +SCPV+ G F + + K+P F P G Y ++TL ++ N+ +TC+TF
Sbjct: 5 ILLLLINFMLILIVNGDIWNYCDGNINPTFKINKLTLLPDPPLVGKEVTISLEGSLNEQITSGSSIFNVAFFINGGWRQLPTFHNDICKVLSCPVSAGPFTYSTSIKVPIFTPHGQYKGQLTLTDQSNRNVTCLTF 140
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_ARTBC (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01325 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.210e-12 Identity = 35/127 (27.56%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 94 YCADVNYDV-KVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV--VHKEIHDFCEE-----VSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCIT----FNLKI 438
YCAD + ++ ++ V+++P+P + +P+ K S T + I G V + +GF+ +++E+ D C++ + CP+ G V+ + +P PPG Y V + + + +P+TC+T F +K+
Sbjct: 49 YCADPSENLLQIERVDLSPNPPLPGQPLVIKASGITAKEIKKGATVQLQVTYGFLQLINQEM-DLCDQTEKVGLDCPLEKGKMVLKKSVDIPPQVPPGKYIVRADVSSAEGEPITCLTATVVFEIKV 174
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_ASPOR (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pltp PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.661e-11 Identity = 31/116 (26.72%), Postives = 57/116 (49.14%), Query Frame = 1
Query: 94 YCADVNYDV-KVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV-VHKEIHDFCE-----EVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCI 420
YC D + D+ + V+++P+P + + + S E I G +V++ +G + + ++ D CE E+ CP+ G + LP PPG YTV+ + N + +TC+
Sbjct: 49 YCNDPSGDILDIKQVDLSPNPPLPGKTLAITASGTLREKIEDGAYVLLEVKYGLITLVRQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPKQIPPGKYTVQADVFNSDGEHITCL 164
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_NEUCR (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=npc-2 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.478e-10 Identity = 36/116 (31.03%), Postives = 57/116 (49.14%), Query Frame = 1
Query: 97 CADVNYD-VKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV-VHKEIHDFCEE-----VSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCIT 423
AD D V + V +TP+P + +T + S EAI G +V + +G++ + D C+E + CP+ G + +LP PPG YTVE + N +K +TC+T
Sbjct: 46 AADRKDDIVTIEEVILTPNPPEAGQTLTIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMKNVELECPIKKGRLSITKNVELPKEIPPGKYTVEADVYNSDDKHITCLT 161
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_USTMA (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=NPC2 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.514e-10 Identity = 30/131 (22.90%), Postives = 59/131 (45.04%), Query Frame = 1
Query: 73 AQATTFGYCADVNYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV-VHKEIHDFCE-------EVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNLKIG 441
Q + C + V V + ++PDP V + +T + + + G + ++ G + + D CE ++ CP++ G + + HT LP PPG + V +T +N+ L C+ +++ G
Sbjct: 60 GQGWQWSSCGTGDEVVNVESIVVSPDPPVPGQNLTVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQARESNADLQCPLSAGEYELEHTVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFG 190
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: Y2107_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282107 PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.856e-9 Identity = 36/146 (24.66%), Postives = 62/146 (42.47%), Query Frame = 1
Query: 22 KLNHLLCLFILTLSFAHAQATTFG----YCADVNYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFVVHKEIHDFCEEVS---CPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNLKI 438
K LL +F + + A+A F C ++ V I+PDP VR + V+ S + I GG I + + + +E C + CP+ G + + +P AP G Y+ L ++ N + CI N+++
Sbjct: 2 KQKLLLFIFSILILLIAAEAKMFKDIWKSCGKSTDTFQIKNVTISPDPPVRGQTVSIYASGELKDTISGGDVNIQIKFGIITIIRETKPICSSDNPFPCPIQPGDYTHSVDIAIPDNAPRGKYSGNFVLTDQANDEIACINVNMQL 147
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_ASPFU (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=npc2 PE=3 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 3.197e-9 Identity = 28/116 (24.14%), Postives = 57/116 (49.14%), Query Frame = 1
Query: 94 YCADVNYDV-KVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV-VHKEIHDFCEEV-----SCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCI 420
YC+D + ++ ++ V++ P+P + + ++ S E + G +V + +G + + K+ D CE++ CP+ G + LP+ PPG Y V + + K +TC+
Sbjct: 49 YCSDPSGNILQIESVDLVPNPPLPGQTLSINASGNLKERVEEGAYVALEVKYGLITLIKQTADLCEQIKNVDLECPLEKGEMTLTKQVDLPSHIPPGKYNVHADVYTKDGKKITCL 164
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_EMENI (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=npc2 PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 1.486e-8 Identity = 33/118 (27.97%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 94 YCADVNYDV-KVSGVEITPDPVVRSRPVTFKISAATG--EAIYGGKWVIIVAYFGFV-VHKEIHDFCEEVS-----CPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCI 420
YC++ + D+ +++ V++ P+P T KI AA E I G +V++ +G + + ++ D C +++ CP+ G V+ LP+ P G YTV + + NK +TC+
Sbjct: 47 YCSEPSGDILEINSVDLAPNPPKAG--TTLKIRAAGNLHERIEAGAYVVLEVKYGLITLLRDTADLCAQLTNVDLQCPLEEGPMVLTKEVDLPSQIPRGRYTVHADVYTKDNKRITCL 162
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC2_ASHGO (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=NPC2 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.245e-8 Identity = 30/118 (25.42%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 103 DVNYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFV-VHKEIHDFCEEV-------SCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNL 432
D ++ + V +EITP+P R + +T + + G +V + G++ + E D C+E+ CP+ G + ++ T ++P PPG Y V ++P+TC+T ++
Sbjct: 53 DEDHLLDVQEIEITPNPPHRGKNLTVEARGDLFGPVEDGAYVTVEVRLGYIKLLSETFDLCKELEENDLGLQCPLEEGEYELSKTVEIPQQVPPGRYHVVARAYTVDDEPITCLTGDV 170
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Match: NPC22_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282109 PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 2.297e-8 Identity = 30/114 (26.32%), Postives = 52/114 (45.61%), Query Frame = 1
Query: 109 NYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFVVHKEIHDFC----EEVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNLKI 438
N K++ V I PDP V+ + +T S GE + G+ I+V + + E D C CP+ G + +P AP G YT +++ ++++ + CI L +
Sbjct: 29 NEKFKITSVSIVPDPPVKGKLITISGSGVLGENLTSGQVAILVKFGLITLINEKKDICTLPGSPYKCPIKEGEYSHTINFTIPEAAPNGKYTGHVSVTDQESSEIACIDVTLTL 142 The following BLAST results are available for this feature:
BLAST of Phvul.005G117866.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.005G117866.1_Pv_G19833_v2.1 >Phvul.005G117866.1_Pv_G19833_v2.1 ID=Phvul.005G117866.1_Pv_G19833_v2.1; Name=Phvul.005G117866.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=173bpback to top mRNA from alignment at Chr05:35296932..35299686- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.005G117866.1_Pv_G19833_v2.1 ID=Phvul.005G117866.1_Pv_G19833_v2.1; Name=Phvul.005G117866.1; organism=Phaseolus vulgaris; type=mRNA; length=2755bp; location=Sequence derived from: Chr05:35296932..35299686- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr05:35296932..35299686- >Phvul.005G117866.1_Pv_G19833_v2.1 ID=Phvul.005G117866.1_Pv_G19833_v2.1; Name=Phvul.005G117866.1; organism=Phaseolus vulgaris; type=CDS; length=519bp; location=Sequence derived from: Chr05:35296932..35299686- (Phaseolus vulgarisback to top |