Phvul.005G124400.1

Transcript Overview
NamePhvul.005G124400.1
Unique NamePhvul.005G124400.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05supercontigChr05:36141181..36143444 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL016Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL108Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuR472Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR481Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR493Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0052Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0289Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL075Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL043Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL233Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL621Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0908Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1032Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1033Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1113Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0334Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0665Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0780Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1168Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1224Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1378Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL156Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL533Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR469Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR483Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR485Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR481Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR523Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR534Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR478Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR520Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR529Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR455Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR457Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR408Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR417Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR429Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR535Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR556Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR582Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR599Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL037Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL215Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL604Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL090Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL669Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL053Cicer arietinum
carpvL223Cicer arietinum
carpvL336Cicer arietinum
carpvL598Cicer arietinum
ccapvL124Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL289Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL379Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL482Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR534Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR537Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR558Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR516Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR517Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR531Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR535Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR559Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR532Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR536Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR561Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR429Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR444Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR457Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR439Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Va05G048000.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan05g168800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun05g236800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr05.2247Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_23757.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.07G055500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_034644Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.07G073100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g236800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004487446.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_022779731.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_01308Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_01338.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_00703.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_07G00591.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.1000919Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.005G124400Phvul.005G124400_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124400.1Phvul.005G124400.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.005G124400.1_Pv_G19833_v2.1Phvul.005G124400.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124400.1.v2.1.five_prime_UTR.2Phvul.005G124400.1.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.005G124400.1.v2.1.five_prime_UTR.1Phvul.005G124400.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124400.1.v2.1.CDS.1Phvul.005G124400.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


Homology
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 448.358 bits (1152), Expect = 4.504e-149
Identity = 242/556 (43.53%), Postives = 342/556 (61.51%), Query Frame = 1
Query:  208 ALSCFHDMRGIEFF------VPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            A++ F++M   EF        P  LKAC K+  ++EGKQI G  LK     D FV ++LVRM +  G ++ AR +F                 Y    + DM      R    ++V  N MIDGY + G C+ A  +F  M  R VV+W +MIS + LN   K  + +FREM    +RP+   +VSVL AI+ LG +E G+W+H Y   + I  + + +GSALI+MY+KCG IE A HVF  +  R NV  W++MI+G A HG A +AI+ F +M +A ++P D+ ++ LL+AC+HGGL++EG+ YF  M     + P+I+HYGC+VDLLGRSG L++A E I NMP +PD +IWKA+L A     NV +G   A   +++ P DS  YV LSN+YA  G W +VS++R  M+++ +RK PGCS I +DG +H+F+V    +    + + S L E+  KL+  GY P   +V L++EE +KE+ L  HSEK+A AFGL S   G PI IVKNLRIC DCH+ ++L+SK+Y R+I +RD+ RFHHF  G CSC +YW
Sbjct:  111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF-----------------YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID-DVLGSALIDMYSKCGIIEKAIHVFERL-PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKE-INSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646          

HSP 2 Score: 89.3521 bits (220), Expect = 2.948e-17
Identity = 76/309 (24.60%), Postives = 135/309 (43.69%), Query Frame = 1
Query:  484 QIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLG-VRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVF-RSICHR-------------------------------------------RNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQF---YFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAIL 1266
             +D A ++F +MPQR+  S NT+I G+ +                      +    A +        + LF EM+S   V P+     SVL A A  G ++EGK IHG         +  F+ S L+ MY  CG +++A  +F ++I  +                                           R+V  WN+MISG + +G   +A+E+F+EM++  ++P+ +T + +L A +  G ++ G++   Y E   I+   V        ++D+  + G +E+A+ V   +P E +V+ W A++
Sbjct:   74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSE----------------------SDEDKALI-------AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD-EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG----SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMI 347          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 434.491 bits (1116), Expect = 1.088e-142
Identity = 239/616 (38.80%), Postives = 349/616 (56.66%), Query Frame = 1
Query:  241 EFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR-----DLVSCN----------------------------------TMIDGYGKHGLCELAEEVFMDMGVR-------------------------------DVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPE-------GVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            +F   P LKA  K  AL EG ++ G   K     DPFV    + M    G +  AR+VFD+M  RD+++WN+++  Y + G +D A ++FE M        +++ CN                                   ++  Y   G  ++A E F  M VR                               D+V WT+MISA+V +  P++ L +F EM   G++PD  ++ SV+SA A+LG +++ KW+H  I  N  L++   I +ALINMYAKCG ++    VF  +  RRNV  W+SMI+ L+ HG A +A+ LF  M++  ++P+++TF+G+L  C+H GL++EG+  F +M  ++ I PK++HYGC+VDL GR+  L +ALEVI +MP   +V+IW +++ A   H  + LG  AA R LEL P      VL+SNIYA+  RW+DV  +R +M ++ V K  G S I  +GK H+FL+G   +   N+ + +KL+EVVSKLK  GY PD   V +D+EE EK+  ++ HSEKLAL FGL +  +       GV I IVKNLR+C DCH F +LVSK+Y R+II+RD+ RFH +  G CSCR+YW
Sbjct:  111 QFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKM-PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE-IYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722          

HSP 2 Score: 58.5362 bits (140), Expect = 1.248e-7
Identity = 57/247 (23.08%), Postives = 103/247 (41.70%), Query Frame = 1
Query:  178 PYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRD-----------LVSCN-----------------------------TMIDGYGKHGLCELAEEVFMDMGV-RDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKW 795
            P +A+ VF     C   ++     +   + AC     L++ K +   I    L ++  + N+L+ M  + G ++  R VF+KMP R+++SW+S+++     G+   A  +F RM Q +           L  C+                              M+D +G+  L   A EV   M V  +VV W S++SA  ++ + + G    + +L L   PD    + ++S I    +  E +W
Sbjct:  325 PQEALRVFEEM--CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL--EPDHDGALVLMSNI----YAREQRW 563          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 436.417 bits (1121), Expect = 1.135e-142
Identity = 215/505 (42.57%), Postives = 318/505 (62.97%), Query Frame = 1
Query:  343 DPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            D F   ++V   ++  MVE AR +FDKMP R+ +SWN++L+GY++  +++MA+E+F+ MP R++ + NTMI GY + G    A+ +F  M  RD V+W +MI+ +  +    + L LF +M   G R +  +  S LS  AD+  +E GK +HG +      +   F+G+AL+ MY KCG IE A  +F+ +  + ++  WN+MI+G + HG    A+  F+ M+R  LKPDD T + +LSAC+H GL+D+G+ YF TM   + ++P  QHY C+VDLLGR+G LE A  ++ NMPFEPD  IW  +L AS  H N  L  TAA +   + P++S  YVLLSN+YA  GRW DV K+R  MR +GV+K+PG S I +  K H F VG   +   ++ + + LEE+  ++K  GY    + V  D+EE EKE  +  HSE+LA+A+G+  +  G PI ++KNLR+C DCH  ++ +++I  R II+RD NRFHHF  G CSC +YW
Sbjct:  280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE-IFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781          

HSP 2 Score: 131.339 bits (329), Expect = 1.698e-30
Identity = 85/305 (27.87%), Postives = 158/305 (51.80%), Query Frame = 1
Query:  358 NSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCA 1272
            N ++   L  G  ELAR +FD+MP RDL+SWN ++ GY++   +  ARE+FE MP+RD+ S NTM+ GY ++G  + A  VF  M  ++ V+W +++SA+V N + ++   LF+         +  A+VS    +   GFV++ K +    F + +        + +I  YA+ G+I+ A  +F      ++V  W +M+SG   + +  EA ELF +M     + +++++  +L+    G  M+  +  F+ M  +      +  +  ++    + G + +A  +   MP + D + W A++  
Sbjct:   99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWALVSWNCLLG--GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383          

HSP 3 Score: 63.1586 bits (152), Expect = 4.665e-9
Identity = 56/215 (26.05%), Postives = 98/215 (45.58%), Query Frame = 1
Query:  259 TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR----DLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLC--LFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQ 885
             L  C    ALE GKQ+ G ++K       FV N+L+ M  + G +E A  +F +M  +D++SWN++++GY + G  ++A   FE M +     D  +   ++      GL +   + F  M     V   S   A +++   + GL       M ++   PDA    ++L A    G  E  +     IF+ +  ++  ++   L N+YA  G+
Sbjct:  415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV--LLSNLYASSGR 627          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 8.512e-142
Identity = 239/609 (39.24%), Postives = 352/609 (57.80%), Query Frame = 1
Query:  244 FFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDK-------------------------------MPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQ---------------------------------------RDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSN-KILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            +  P  LK+C KS A +EG+QI G +LK     D +V  SL+ M ++ G +E A  VFDK                               +P +D++SWN+++SGY + G    A E+F+ M +                                        +L   N +ID Y K G  E A  +F  +  +DV++W ++I  +   +  K+ L LF+EML  G  P+   ++S+L A A LG ++ G+WIH YI    K + N + + ++LI+MYAKCG IE A+ VF SI H+ ++  WN+MI G A HG A  + +LF  M +  ++PDDITF+GLLSAC+H G++D G+  F TM   +K+ PK++HYGC++DLLG SG  ++A E+I+ M  EPD +IW ++L A   H NV LG + A   +++ P++   YVLLSNIYA  GRW++V+K R+++  +G++K+PGCSSI +D  VH+F++G   +   N+ +   LEE+   L+  G+ PD +EV  ++EE  KE  L  HSEKLA+AFGL S   G  + IVKNLR+C +CH   +L+SKIY R+II RD+ RFHHF  G CSC +YW
Sbjct:  135 YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH-PRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741          

HSP 2 Score: 99.3673 bits (246), Expect = 2.604e-20
Identity = 91/335 (27.16%), Postives = 154/335 (45.97%), Query Frame = 1
Query:  589 AEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKI-LDNYNFIGSALINMYAKCGQIENAYHVFRSICHR------------------------------RNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEG-QFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHN---NVVLGHTAALRALELAPQDSSCYVLL---SNIYA-KMGRWDDVSKVRSMMRKRGVRKIPGCSSILMD 1476
            A  VF  +   +++ W +M     L+  P   L L+  M+SLG+ P++     VL + A     +EG+ IHG++      LD Y  + ++LI+MY + G++E+A+ VF    HR                              ++V  WN+MISG A  G   EA+ELF++M +  ++PD+ T + ++SAC   G ++ G Q +       F    KI     ++DL  + G LE A  +   +P++ DV+ W  ++      N     +L     LR+ E  P D +   +L   +++ A  +GRW  V   +   R +GV       + L+D
Sbjct:   87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY--VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI--VNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK---RLKGVTNASSLRTSLID 412          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 8.704e-142
Identity = 235/611 (38.46%), Postives = 353/611 (57.77%), Query Frame = 1
Query:  241 EFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRD---------------------------------------LVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSM-------------------------------ISAFVLNHQPKKGLCLFREM-LSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECE-KESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            ++  P  +KA  +  +L  G+ + G  +K+ + +D FV NSL+      G ++ A  VF  +  +D++SWNS+++G+++ G  D A E+F++M   D                                       L   N M+D Y K G  E A+ +F  M  +D VTWT+M                               ISA+  N +P + L +F E+ L   ++ +   +VS LSA A +G +E G+WIH YI  + I  N++ + SALI+MY+KCG +E +  VF S+  +R+V  W++MI GLA HG   EA+++F +M+ A +KP+ +TF  +  AC+H GL+DE +  F  M+  + IVP+ +HY CIVD+LGRSG LE+A++ I  MP  P   +W A+L A   H N+ L   A  R LEL P++   +VLLSNIYAK+G+W++VS++R  MR  G++K PGCSSI +DG +H+FL G   +   ++ V  KL EV+ KLKS GYEP++++V   IEE E KE  L LHSEKLA+ +GL S      I ++KNLR+C DCH+  +L+S++Y+R+II+RD+ RFHHF  G CSC ++W
Sbjct:  131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH-VTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH-PMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738          

HSP 2 Score: 129.413 bits (324), Expect = 6.277e-30
Identity = 102/400 (25.50%), Postives = 178/400 (44.50%), Query Frame = 1
Query:  286 ALEEGKQIMGFILKTHLWNDPFVTNSLVRMCL--ELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQ--------IDMARE--------------------------------VFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVG------------------------------DWNSMISGLAFHGLAPEAIELFQEMERAK-LKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAIL 1266
            +L + KQ  G +++T  ++DP+  + L  M        +E AR VFD++P  +  +WN+L+  Y             +DM  E                                  +     D+   N++I  Y   G  + A +VF  +  +DVV+W SMI+ FV    P K L LF++M S  V+     +V VLSA A +  +E G+ +  YI  N++  N   + +A+++MY KCG IE+A  +F ++  + NV                                WN++IS    +G   EA+ +F E++  K +K + IT +  LSAC   G ++ G++    ++ K  I         ++ +  + G LE++ EV +++  + DV +W A++
Sbjct:   42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMI 438          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 2.125e-139
Identity = 220/535 (41.12%), Postives = 325/535 (60.75%), Query Frame = 1
Query:  259 TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGV-RPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMER-AKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            T  +  KSC+ + GK I   +LK  L  DP+V   LV +                               Y K G +  A++VF+RMP+R LVS   MI  Y K G  E A  +F  M  RD+V+W  MI  +  +  P   L LF+++L+ G  +PD   VV+ LSA + +G +E G+WIH ++ S++I  N   + + LI+MY+KCG +E A  VF     R+++  WN+MI+G A HG + +A+ LF EM+    L+P DITF+G L AC H GL++EG   FE+M  ++ I PKI+HYGC+V LLGR+G L++A E I NM  + D ++W ++L +   H + VLG   A   + L  ++S  YVLLSNIYA +G ++ V+KVR++M+++G+ K PG S+I ++ KVH+F  G   +   ++ + + L ++  ++KS GY P+ N V  D+EE EKE  L +HSE+LA+A+GL S   G P+ I KNLR+CSDCHT  +L+SKI  R+I++RD+NRFHHF  G CSC ++W
Sbjct:  132 TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDV-------------------------------YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK-VCTGLIDMYSKCGSLEEAVLVFND-TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH-SKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 2.641e-138
Identity = 220/531 (41.43%), Postives = 324/531 (61.02%), Query Frame = 1
Query:  298 GKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREML-----SLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYN-----FIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERA-KLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            G++    IL   L  DPFV  SL+ M    G +  A+ VFD   ++DL +WNS+++ Y KAG ID AR++F+ MP+R+++S + +I+GY                               V+  + K+ L LFREM         VRP+   + +VLSA   LG +E+GKW+H YI      D Y+      +G+ALI+MYAKCG +E A  VF ++  +++V  +++MI  LA +GL  E  +LF EM  +  + P+ +TF+G+L AC H GL++EG+ YF+ M  +F I P IQHYGC+VDL GRSG +++A   I +MP EPDVLIW ++L  S    ++     A  R +EL P +S  YVLLSN+YAK GRW +V  +R  M  +G+ K+PGCS + ++G VH+F+VG   +   ++ + + L+E++ +L+  GY  D  EV LD+ E +KE  L  HSEKLA+AF L     G P+ I+KNLRIC DCH  M+++SK+++R+I++RD NRFHHF  G CSCR++W
Sbjct:   81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGY-------------------------------VMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI------DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDE-SQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 4.090e-136
Identity = 204/488 (41.80%), Postives = 302/488 (61.89%), Query Frame = 1
Query:  394 VELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            V++AR +F+ MP +  +SW S+L GY  +G+I+ A E FE MP + +++CN MI G+G+ G    A  VF  M  RD  TW  MI A+       + L LF +M   GVRP  P+++S+LS  A L  ++ G+ +H ++   +  D+  ++ S L+ MY KCG++  A  VF     + ++  WNS+ISG A HGL  EA+++F EM  +   P+ +T + +L+AC++ G ++EG   FE+M+ KF + P ++HY C VD+LGR+G +++A+E+I +M  +PD  +W A+L A   H+ + L   AA +  E  P ++  YVLLS+I A   +W DV+ VR  MR   V K PGCS I +  KVH F  G   N      +L  LE+    L+  GY PD + V  D++E EK   L  HSE+LA+A+GL  +PEGVPI ++KNLR+C DCH  ++L+SK+  R+II+RD NRFHHFN G CSCR+YW
Sbjct:  219 VDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV-YVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704          

HSP 2 Score: 110.153 bits (274), Expect = 8.876e-24
Identity = 88/367 (23.98%), Postives = 158/367 (43.05%), Query Frame = 1
Query:  358 NSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIH-----------------------------------------------GYIFSNKILDNYNFIG----------SALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEG-QFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKH 1284
            NS+V      G+ + AR +FD+M  R+++SWN L+SGY+K   I  AR VFE MP+R++VS   M+ GY + G+   AE +F  M  R+ V+WT M    + + +  K   L+ +M+ +    D  A  +++  +   G V+E + I                                                GY  S +I D   F            +A+I  + + G+I  A  VF  +   R+   W  MI      G   EA++LF +M++  ++P   + + +LS C     +  G Q +   ++ +F     +     ++ +  + G L +A +++ +     D+++W +I+     H
Sbjct:   52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY-DMMPV---KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVF-DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNSIISGYASH 410          

HSP 3 Score: 100.138 bits (248), Expect = 1.269e-20
Identity = 76/298 (25.50%), Postives = 142/298 (47.65%), Query Frame = 1
Query:  385 LGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAV--VSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCA 1272
            +G +  AR  FD +  + + SWNS++SGY   G    AR++F+ M +R++VS N ++ GY K+ +   A  VF  M  R+VV+WT+M+  ++      +   LF  M      P+   V    +   + D G +++ + ++  +    ++ + N IG        + G+++ A  +F  +   RNV  W +MI+G   +     A +LF+ M     +  ++++  +L      G +++ + +FE M +K    P I     IV   G  G + +A  V   M  + D   W+ ++ A
Sbjct:   30 IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGG-----LCREGRVDEARLIFDEM-RERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVG-FGEVGEISKARRVFDLME-DRDNATWRGMIKA 305          

HSP 4 Score: 61.6178 bits (148), Expect = 1.494e-8
Identity = 50/199 (25.13%), Postives = 91/199 (45.73%), Query Frame = 1
Query:  205 HALSCFHDMR--GIEFFVPP---TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR----DLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVT-----WTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSA 759
             AL  F  M+  G+    P     L  C    +L+ G+Q+   +++    +D +V + L+ M ++ G +  A+ VFD+  ++D+I WNS++SGY   G  + A ++F  MP      + V+   ++      G  E   E+F  M  +  VT     ++  +       Q  K + L     S+ ++PDA    ++L A
Sbjct:  314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE---SMTIKPDATVWGALLGA 509          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 2.942e-134
Identity = 209/560 (37.32%), Postives = 324/560 (57.86%), Query Frame = 1
Query:  178 PYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            P  +   +   LS  +D++   + V   ++AC      E G Q+ G  ++    NDP V   L+ +  ELG ++    VF+ +P  D +   ++++   + G +  AR++FE MP+R                               D + W +MIS +    + ++ L +F  M   GV+ +  A++SVLSA   LG +++G+W H YI  NKI      + + L+++YAKCG +E A  VF  +   +NV  W+S ++GLA +G   + +ELF  M++  + P+ +TF+ +L  C+  G +DEGQ +F++M+ +F I P+++HYGC+VDL  R+G LE A+ +I  MP +P   +W ++L AS  + N+ LG  A+ + LEL   +   YVLLSNIYA    WD+VS VR  M+ +GVRK PGCS + ++G+VH+F VG   +  Y Q + +  +++  +L+  GY+ D   V  DI+E EKE  L LHSEK A+AFG+ S+ E VPI IVKNLR+C DCH    ++SKI+NR+II+RD+NRFHHF  G CSC  +W
Sbjct:   87 PEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPER-------------------------------DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVR-LATTLVDLYAKCGDMEKAMEVFWGM-EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQ-IDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612          
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 4.029e-134
Identity = 219/578 (37.89%), Postives = 329/578 (56.92%), Query Frame = 1
Query:  247 FVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERM------PQRDLVSC---------------------------------NTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSN--KILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857
            F    LK C     L +G+ +   IL++   +D  + N+L+ M  + G +E AR VF+KMP RD ++W +L+SGY +  +   A   F +M      P    +S                                  + ++D Y ++GL + A+ VF  +  R+ V+W ++I+        +K L LF+ ML  G RP   +  S+  A +  GF+E+GKW+H Y+  +  K++    F G+ L++MYAK G I +A  +F  +  +R+V  WNS+++  A HG   EA+  F+EM R  ++P++I+FL +L+AC+H GL+DEG  Y+E M+ K  IVP+  HY  +VDLLGR+G L +AL  I  MP EP   IWKA+L A   H N  LG  AA    EL P D   +V+L NIYA  GRW+D ++VR  M++ GV+K P CS + ++  +H F+     +    + +  K EEV++K+K  GY PD + V + +++ E+E  L  HSEK+ALAF L + P G  IHI KN+R+C DCHT ++L SK+  R+II+RD NRFHHF  G CSC++YW
Sbjct:   62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV---AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERH-PQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633          
The following BLAST results are available for this feature:
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP425_ARATH4.504e-14943.53Pentatricopeptide repeat-containing protein At5g48... [more]
PP311_ARATH1.088e-14238.80Pentatricopeptide repeat-containing protein At4g14... [more]
PP301_ARATH1.135e-14242.57Pentatricopeptide repeat-containing protein At4g02... [more]
PPR21_ARATH8.512e-14239.24Pentatricopeptide repeat-containing protein At1g08... [more]
PP175_ARATH8.704e-14238.46Pentatricopeptide repeat-containing protein At2g29... [more]
PP354_ARATH2.125e-13941.12Pentatricopeptide repeat-containing protein ELI1, ... [more]
PP295_ARATH2.641e-13841.43Pentatricopeptide repeat-containing protein At3g62... [more]
PPR84_ARATH4.090e-13641.80Pentatricopeptide repeat-containing protein At1g56... [more]
PP410_ARATH2.942e-13437.32Putative pentatricopeptide repeat-containing prote... [more]
PP252_ARATH4.029e-13437.89Pentatricopeptide repeat-containing protein At3g24... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 377..503
e-value: 2.8E-10
score: 42.3
coord: 278..376
e-value: 5.1E-22
score: 80.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 205..277
e-value: 1.9E-9
score: 39.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 67..204
e-value: 2.8E-26
score: 94.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 386..409
e-value: 0.74
score: 10.2
coord: 210..240
e-value: 6.7E-6
score: 26.0
coord: 179..206
e-value: 3.4E-7
score: 30.1
coord: 120..145
e-value: 0.016
score: 15.4
coord: 284..306
e-value: 0.075
score: 13.3
coord: 451..480
e-value: 0.05
score: 13.9
coord: 148..177
e-value: 8.4E-8
score: 32.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 315..346
e-value: 6.3E-5
score: 20.9
coord: 179..208
e-value: 7.2E-6
score: 23.9
coord: 148..178
e-value: 2.3E-7
score: 28.6
coord: 120..146
e-value: 0.002
score: 16.2
coord: 210..244
e-value: 2.0E-7
score: 28.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 311..357
e-value: 8.6E-10
score: 38.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..345
score: 11.213
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..180
score: 12.288
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..412
score: 6.401
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..207
score: 5.831
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..309
score: 6.215
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 11.63
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..482
score: 9.558
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..145
score: 8.331
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 346..376
score: 6.27
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 484..608
e-value: 5.9E-33
score: 113.5

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.005G124400.1_Pv_G19833_v2.1

>Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=620bp
MISSCIPVSVGANPTRLLSDERTTLSQVRQVHAYIIKTNLVTHVLSVTKL
VKVLSQSSVPYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEG
KQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISW
NSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEV
FMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSV
LSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAY
HVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITF
LGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLE
QALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSS
CYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLV
GKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLIL
HSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIR
DQNRFHHFNKGCCSCRNYW*
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mRNA from alignment at Chr05:36141181..36143444-

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1; organism=Phaseolus vulgaris; type=mRNA; length=2264bp; location=Sequence derived from: Chr05:36141181..36143444- (Phaseolus vulgaris
ATGAGTTGTGGTAGAAGAAGATATGGCACAACAAAGAGGGAGAAGAAACA GAGACCTTTGCTCTGGGATTCAGATTCATAAAATCAACACCCTTCATTTC TTGCAGGTCGCACTCTTTTTTCCATCTTCTTTTGCTTTCTTCCATGCCAC TTTATATTATTTACTTTCTTATTTCCTTGTTTTTTTCAATCTTATTCCAC CATCTTTGAAATGAATTTTTGTGCTCAGTCTCGTTTTTCTCTGATAATAA TTATCATATTCTCTCTTTTCCAGCATTGTATTATGTCTTAGAATTCAGTT TTTGCAATGGACCTTCAATAAGAATGAAAGAAATGAGAGTCATGGAAAGC ATAAAGTACCAAACGACGGTTGGAGAAACATAGCAAAGGTTGTTTGTTGT TAGGATGATATCAAGTTGTATTCCAGTTTCAGTTGGGGCAAACCCAACAA GGTTGTTGTCAGACGAACGCACTACATTGTCCCAAGTGCGCCAAGTTCAT GCCTACATCATTAAAACAAACCTCGTCACTCACGTGCTTTCTGTCACCAA ACTTGTTAAGGTTCTTTCTCAGAGCAGTGTTCCCTACGACGCCATTTCCG TTTTTGCTCATGCACTCTCTTGCTTCCATGACATGAGGGGAATTGAGTTT TTTGTTCCCCCCACACTCAAAGCTTGTGGCAAGTCGTGTGCATTGGAGGA AGGGAAACAAATAATGGGTTTCATTTTGAAAACCCATTTGTGGAATGATC CGTTTGTCACTAACTCCTTGGTTCGCATGTGTTTGGAGCTTGGCATGGTT GAACTTGCAAGGTCGGTGTTCGATAAAATGCCTACAAGAGACTTGATTTC TTGGAACTCGTTACTTTCAGGGTACTTGAAAGCTGGTCAAATTGACATGG CACGTGAAGTGTTTGAGAGAATGCCTCAAAGGGATCTAGTTTCGTGCAAT ACCATGATTGATGGGTACGGGAAGCATGGACTGTGCGAGCTTGCTGAGGA GGTTTTTATGGACATGGGTGTCAGGGATGTGGTGACTTGGACGAGTATGA TTTCAGCTTTTGTTCTTAATCATCAACCAAAGAAAGGGTTATGTTTGTTC AGAGAAATGTTAAGTTTAGGAGTTAGACCGGATGCTCCTGCTGTTGTCAG TGTCCTTTCAGCCATTGCTGACCTTGGTTTTGTTGAGGAAGGAAAATGGA TACACGGTTATATATTTTCTAATAAGATACTTGACAATTATAATTTTATT GGATCGGCTCTCATAAACATGTATGCTAAATGTGGTCAAATAGAAAATGC CTACCATGTATTTAGAAGCATTTGTCACCGACGAAATGTTGGCGATTGGA ATTCTATGATCTCTGGTTTAGCCTTCCATGGACTTGCCCCTGAAGCTATT GAGCTTTTTCAGGAAATGGAAAGGGCAAAACTTAAGCCTGATGATATCAC TTTCTTGGGGCTTTTAAGTGCTTGCAATCATGGAGGTCTTATGGATGAGG GTCAGTTTTACTTTGAAACCATGCAAATAAAGTTCAAGATAGTCCCTAAA ATTCAGCATTACGGATGCATTGTTGACCTTCTTGGGAGATCAGGTTGCTT AGAACAGGCCCTTGAGGTTATACACAATATGCCTTTTGAGCCTGATGTTT TAATTTGGAAGGCCATTCTTTGTGCCAGCATGAAGCACAATAATGTTGTG TTGGGACACACTGCTGCATTGAGAGCCTTAGAGTTGGCTCCACAAGATTC AAGCTGTTATGTTCTTCTCTCAAATATCTATGCCAAAATGGGAAGGTGGG ATGACGTGAGTAAAGTCAGATCGATGATGAGAAAAAGGGGAGTGAGAAAA ATTCCTGGATGTAGCTCTATTCTGATGGATGGTAAAGTGCATCAATTCCT TGTGGGGAAGGCCATGAATGTGGGGTACAACCAAAGTGTTTTGTCTAAGT TAGAGGAGGTTGTGTCTAAGCTGAAATCAGAGGGATATGAACCTGATCTC AATGAGGTTTTTCTAGATATTGAAGAGTGTGAAAAAGAAAGCCAACTAAT TCTTCACAGTGAAAAATTGGCTCTTGCTTTTGGATTGTCAAGTATCCCTG AGGGTGTTCCCATTCATATAGTGAAGAATTTAAGAATTTGTAGTGACTGT CACACGTTCATGCAACTGGTTTCAAAAATCTACAATCGTCAAATTATAAT CAGAGATCAAAACCGTTTTCATCATTTTAATAAAGGTTGTTGTTCCTGCA GAAATTATTGGTAA
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Coding sequence (CDS) from alignment at Chr05:36141181..36143444-

>Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1; organism=Phaseolus vulgaris; type=CDS; length=1860bp; location=Sequence derived from: Chr05:36141181..36143444- (Phaseolus vulgaris
ATGATATCAAGTTGTATTCCAGTTTCAGTTGGGGCAAACCCAACAAGGTT
GTTGTCAGACGAACGCACTACATTGTCCCAAGTGCGCCAAGTTCATGCCT
ACATCATTAAAACAAACCTCGTCACTCACGTGCTTTCTGTCACCAAACTT
GTTAAGGTTCTTTCTCAGAGCAGTGTTCCCTACGACGCCATTTCCGTTTT
TGCTCATGCACTCTCTTGCTTCCATGACATGAGGGGAATTGAGTTTTTTG
TTCCCCCCACACTCAAAGCTTGTGGCAAGTCGTGTGCATTGGAGGAAGGG
AAACAAATAATGGGTTTCATTTTGAAAACCCATTTGTGGAATGATCCGTT
TGTCACTAACTCCTTGGTTCGCATGTGTTTGGAGCTTGGCATGGTTGAAC
TTGCAAGGTCGGTGTTCGATAAAATGCCTACAAGAGACTTGATTTCTTGG
AACTCGTTACTTTCAGGGTACTTGAAAGCTGGTCAAATTGACATGGCACG
TGAAGTGTTTGAGAGAATGCCTCAAAGGGATCTAGTTTCGTGCAATACCA
TGATTGATGGGTACGGGAAGCATGGACTGTGCGAGCTTGCTGAGGAGGTT
TTTATGGACATGGGTGTCAGGGATGTGGTGACTTGGACGAGTATGATTTC
AGCTTTTGTTCTTAATCATCAACCAAAGAAAGGGTTATGTTTGTTCAGAG
AAATGTTAAGTTTAGGAGTTAGACCGGATGCTCCTGCTGTTGTCAGTGTC
CTTTCAGCCATTGCTGACCTTGGTTTTGTTGAGGAAGGAAAATGGATACA
CGGTTATATATTTTCTAATAAGATACTTGACAATTATAATTTTATTGGAT
CGGCTCTCATAAACATGTATGCTAAATGTGGTCAAATAGAAAATGCCTAC
CATGTATTTAGAAGCATTTGTCACCGACGAAATGTTGGCGATTGGAATTC
TATGATCTCTGGTTTAGCCTTCCATGGACTTGCCCCTGAAGCTATTGAGC
TTTTTCAGGAAATGGAAAGGGCAAAACTTAAGCCTGATGATATCACTTTC
TTGGGGCTTTTAAGTGCTTGCAATCATGGAGGTCTTATGGATGAGGGTCA
GTTTTACTTTGAAACCATGCAAATAAAGTTCAAGATAGTCCCTAAAATTC
AGCATTACGGATGCATTGTTGACCTTCTTGGGAGATCAGGTTGCTTAGAA
CAGGCCCTTGAGGTTATACACAATATGCCTTTTGAGCCTGATGTTTTAAT
TTGGAAGGCCATTCTTTGTGCCAGCATGAAGCACAATAATGTTGTGTTGG
GACACACTGCTGCATTGAGAGCCTTAGAGTTGGCTCCACAAGATTCAAGC
TGTTATGTTCTTCTCTCAAATATCTATGCCAAAATGGGAAGGTGGGATGA
CGTGAGTAAAGTCAGATCGATGATGAGAAAAAGGGGAGTGAGAAAAATTC
CTGGATGTAGCTCTATTCTGATGGATGGTAAAGTGCATCAATTCCTTGTG
GGGAAGGCCATGAATGTGGGGTACAACCAAAGTGTTTTGTCTAAGTTAGA
GGAGGTTGTGTCTAAGCTGAAATCAGAGGGATATGAACCTGATCTCAATG
AGGTTTTTCTAGATATTGAAGAGTGTGAAAAAGAAAGCCAACTAATTCTT
CACAGTGAAAAATTGGCTCTTGCTTTTGGATTGTCAAGTATCCCTGAGGG
TGTTCCCATTCATATAGTGAAGAATTTAAGAATTTGTAGTGACTGTCACA
CGTTCATGCAACTGGTTTCAAAAATCTACAATCGTCAAATTATAATCAGA
GATCAAAACCGTTTTCATCATTTTAATAAAGGTTGTTGTTCCTGCAGAAA
TTATTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_rpt
IPR032867DYW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding