Phvul.005G124400.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 448.358 bits (1152), Expect = 4.504e-149 Identity = 242/556 (43.53%), Postives = 342/556 (61.51%), Query Frame = 1 Query: 208 ALSCFHDMRGIEFF------VPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 A++ F++M EF P LKAC K+ ++EGKQI G LK D FV ++LVRM + G ++ AR +F Y + DM R ++V N MIDGY + G C+ A +F M R VV+W +MIS + LN K + +FREM +RP+ +VSVL AI+ LG +E G+W+H Y + I + + +GSALI+MY+KCG IE A HVF + R NV W++MI+G A HG A +AI+ F +M +A ++P D+ ++ LL+AC+HGGL++EG+ YF M + P+I+HYGC+VDLLGRSG L++A E I NMP +PD +IWKA+L A NV +G A +++ P DS YV LSN+YA G W +VS++R M+++ +RK PGCS I +DG +H+F+V + + + S L E+ KL+ GY P +V L++EE +KE+ L HSEK+A AFGL S G PI IVKNLRIC DCH+ ++L+SK+Y R+I +RD+ RFHHF G CSC +YW Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF-----------------YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID-DVLGSALIDMYSKCGIIEKAIHVFERL-PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKE-INSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646 HSP 2 Score: 89.3521 bits (220), Expect = 2.948e-17 Identity = 76/309 (24.60%), Postives = 135/309 (43.69%), Query Frame = 1 Query: 484 QIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLG-VRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVF-RSICHR-------------------------------------------RNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQF---YFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAIL 1266 +D A ++F +MPQR+ S NT+I G+ + + A + + LF EM+S V P+ SVL A A G ++EGK IHG + F+ S L+ MY CG +++A +F ++I + R+V WN+MISG + +G +A+E+F+EM++ ++P+ +T + +L A + G ++ G++ Y E I+ V ++D+ + G +E+A+ V +P E +V+ W A++ Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSE----------------------SDEDKALI-------AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD-EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG----SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMI 347
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 434.491 bits (1116), Expect = 1.088e-142 Identity = 239/616 (38.80%), Postives = 349/616 (56.66%), Query Frame = 1 Query: 241 EFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR-----DLVSCN----------------------------------TMIDGYGKHGLCELAEEVFMDMGVR-------------------------------DVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPE-------GVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 +F P LKA K AL EG ++ G K DPFV + M G + AR+VFD+M RD+++WN+++ Y + G +D A ++FE M +++ CN ++ Y G ++A E F M VR D+V WT+MISA+V + P++ L +F EM G++PD ++ SV+SA A+LG +++ KW+H I N L++ I +ALINMYAKCG ++ VF + RRNV W+SMI+ L+ HG A +A+ LF M++ ++P+++TF+G+L C+H GL++EG+ F +M ++ I PK++HYGC+VDL GR+ L +ALEVI +MP +V+IW +++ A H + LG AA R LEL P VL+SNIYA+ RW+DV +R +M ++ V K G S I +GK H+FL+G + N+ + +KL+EVVSKLK GY PD V +D+EE EK+ ++ HSEKLAL FGL + + GV I IVKNLR+C DCH F +LVSK+Y R+II+RD+ RFH + G CSCR+YW Sbjct: 111 QFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKM-PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE-IYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722 HSP 2 Score: 58.5362 bits (140), Expect = 1.248e-7 Identity = 57/247 (23.08%), Postives = 103/247 (41.70%), Query Frame = 1 Query: 178 PYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRD-----------LVSCN-----------------------------TMIDGYGKHGLCELAEEVFMDMGV-RDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKW 795 P +A+ VF C ++ + + AC L++ K + I L ++ + N+L+ M + G ++ R VF+KMP R+++SW+S+++ G+ A +F RM Q + L C+ M+D +G+ L A EV M V +VV W S++SA ++ + + G + +L L PD + ++S I + E +W Sbjct: 325 PQEALRVFEEM--CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL--EPDHDGALVLMSNI----YAREQRW 563
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 436.417 bits (1121), Expect = 1.135e-142 Identity = 215/505 (42.57%), Postives = 318/505 (62.97%), Query Frame = 1 Query: 343 DPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 D F ++V ++ MVE AR +FDKMP R+ +SWN++L+GY++ +++MA+E+F+ MP R++ + NTMI GY + G A+ +F M RD V+W +MI+ + + + L LF +M G R + + S LS AD+ +E GK +HG + + F+G+AL+ MY KCG IE A +F+ + + ++ WN+MI+G + HG A+ F+ M+R LKPDD T + +LSAC+H GL+D+G+ YF TM + ++P QHY C+VDLLGR+G LE A ++ NMPFEPD IW +L AS H N L TAA + + P++S YVLLSN+YA GRW DV K+R MR +GV+K+PG S I + K H F VG + ++ + + LEE+ ++K GY + V D+EE EKE + HSE+LA+A+G+ + G PI ++KNLR+C DCH ++ +++I R II+RD NRFHHF G CSC +YW Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE-IFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 131.339 bits (329), Expect = 1.698e-30 Identity = 85/305 (27.87%), Postives = 158/305 (51.80%), Query Frame = 1 Query: 358 NSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCA 1272 N ++ L G ELAR +FD+MP RDL+SWN ++ GY++ + ARE+FE MP+RD+ S NTM+ GY ++G + A VF M ++ V+W +++SA+V N + ++ LF+ + A+VS + GFV++ K + F + + + +I YA+ G+I+ A +F ++V W +M+SG + + EA ELF +M + +++++ +L+ G M+ + F+ M + + + ++ + G + +A + MP + D + W A++ Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWALVSWNCLLG--GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383 HSP 3 Score: 63.1586 bits (152), Expect = 4.665e-9 Identity = 56/215 (26.05%), Postives = 98/215 (45.58%), Query Frame = 1 Query: 259 TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR----DLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLC--LFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQ 885 L C ALE GKQ+ G ++K FV N+L+ M + G +E A +F +M +D++SWN++++GY + G ++A FE M + D + ++ GL + + F M V S A +++ + GL M ++ PDA ++L A G E + IF+ + ++ ++ L N+YA G+ Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV--LLSNLYASSGR 627
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 432.95 bits (1112), Expect = 8.512e-142 Identity = 239/609 (39.24%), Postives = 352/609 (57.80%), Query Frame = 1 Query: 244 FFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDK-------------------------------MPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQ---------------------------------------RDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSN-KILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 + P LK+C KS A +EG+QI G +LK D +V SL+ M ++ G +E A VFDK +P +D++SWN+++SGY + G A E+F+ M + +L N +ID Y K G E A +F + +DV++W ++I + + K+ L LF+EML G P+ ++S+L A A LG ++ G+WIH YI K + N + + ++LI+MYAKCG IE A+ VF SI H+ ++ WN+MI G A HG A + +LF M + ++PDDITF+GLLSAC+H G++D G+ F TM +K+ PK++HYGC++DLLG SG ++A E+I+ M EPD +IW ++L A H NV LG + A +++ P++ YVLLSNIYA GRW++V+K R+++ +G++K+PGCSSI +D VH+F++G + N+ + LEE+ L+ G+ PD +EV ++EE KE L HSEKLA+AFGL S G + IVKNLR+C +CH +L+SKIY R+II RD+ RFHHF G CSC +YW Sbjct: 135 YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH-PRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741 HSP 2 Score: 99.3673 bits (246), Expect = 2.604e-20 Identity = 91/335 (27.16%), Postives = 154/335 (45.97%), Query Frame = 1 Query: 589 AEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKI-LDNYNFIGSALINMYAKCGQIENAYHVFRSICHR------------------------------RNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEG-QFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHN---NVVLGHTAALRALELAPQDSSCYVLL---SNIYA-KMGRWDDVSKVRSMMRKRGVRKIPGCSSILMD 1476 A VF + +++ W +M L+ P L L+ M+SLG+ P++ VL + A +EG+ IHG++ LD Y + ++LI+MY + G++E+A+ VF HR ++V WN+MISG A G EA+ELF++M + ++PD+ T + ++SAC G ++ G Q + F KI ++DL + G LE A + +P++ DV+ W ++ N +L LR+ E P D + +L +++ A +GRW V + R +GV + L+D Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY--VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI--VNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK---RLKGVTNASSLRTSLID 412
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 432.565 bits (1111), Expect = 8.704e-142 Identity = 235/611 (38.46%), Postives = 353/611 (57.77%), Query Frame = 1 Query: 241 EFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRD---------------------------------------LVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSM-------------------------------ISAFVLNHQPKKGLCLFREM-LSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECE-KESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 ++ P +KA + +L G+ + G +K+ + +D FV NSL+ G ++ A VF + +D++SWNS+++G+++ G D A E+F++M D L N M+D Y K G E A+ +F M +D VTWT+M ISA+ N +P + L +F E+ L ++ + +VS LSA A +G +E G+WIH YI + I N++ + SALI+MY+KCG +E + VF S+ +R+V W++MI GLA HG EA+++F +M+ A +KP+ +TF + AC+H GL+DE + F M+ + IVP+ +HY CIVD+LGRSG LE+A++ I MP P +W A+L A H N+ L A R LEL P++ +VLLSNIYAK+G+W++VS++R MR G++K PGCSSI +DG +H+FL G + ++ V KL EV+ KLKS GYEP++++V IEE E KE L LHSEKLA+ +GL S I ++KNLR+C DCH+ +L+S++Y+R+II+RD+ RFHHF G CSC ++W Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH-VTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH-PMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738 HSP 2 Score: 129.413 bits (324), Expect = 6.277e-30 Identity = 102/400 (25.50%), Postives = 178/400 (44.50%), Query Frame = 1 Query: 286 ALEEGKQIMGFILKTHLWNDPFVTNSLVRMCL--ELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQ--------IDMARE--------------------------------VFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVG------------------------------DWNSMISGLAFHGLAPEAIELFQEMERAK-LKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAIL 1266 +L + KQ G +++T ++DP+ + L M +E AR VFD++P + +WN+L+ Y +DM E + D+ N++I Y G + A +VF + +DVV+W SMI+ FV P K L LF++M S V+ +V VLSA A + +E G+ + YI N++ N + +A+++MY KCG IE+A +F ++ + NV WN++IS +G EA+ +F E++ K +K + IT + LSAC G ++ G++ ++ K I ++ + + G LE++ EV +++ + DV +W A++ Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMI 438
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1) HSP 1 Score: 422.935 bits (1086), Expect = 2.125e-139 Identity = 220/535 (41.12%), Postives = 325/535 (60.75%), Query Frame = 1 Query: 259 TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGV-RPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMER-AKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 T + KSC+ + GK I +LK L DP+V LV + Y K G + A++VF+RMP+R LVS MI Y K G E A +F M RD+V+W MI + + P L LF+++L+ G +PD VV+ LSA + +G +E G+WIH ++ S++I N + + LI+MY+KCG +E A VF R+++ WN+MI+G A HG + +A+ LF EM+ L+P DITF+G L AC H GL++EG FE+M ++ I PKI+HYGC+V LLGR+G L++A E I NM + D ++W ++L + H + VLG A + L ++S YVLLSNIYA +G ++ V+KVR++M+++G+ K PG S+I ++ KVH+F G + ++ + + L ++ ++KS GY P+ N V D+EE EKE L +HSE+LA+A+GL S G P+ I KNLR+CSDCHT +L+SKI R+I++RD+NRFHHF G CSC ++W Sbjct: 132 TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDV-------------------------------YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK-VCTGLIDMYSKCGSLEEAVLVFND-TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH-SKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 2.641e-138 Identity = 220/531 (41.43%), Postives = 324/531 (61.02%), Query Frame = 1 Query: 298 GKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREML-----SLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYN-----FIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERA-KLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 G++ IL L DPFV SL+ M G + A+ VFD ++DL +WNS+++ Y KAG ID AR++F+ MP+R+++S + +I+GY V+ + K+ L LFREM VRP+ + +VLSA LG +E+GKW+H YI D Y+ +G+ALI+MYAKCG +E A VF ++ +++V +++MI LA +GL E +LF EM + + P+ +TF+G+L AC H GL++EG+ YF+ M +F I P IQHYGC+VDL GRSG +++A I +MP EPDVLIW ++L S ++ A R +EL P +S YVLLSN+YAK GRW +V +R M +G+ K+PGCS + ++G VH+F+VG + ++ + + L+E++ +L+ GY D EV LD+ E +KE L HSEKLA+AF L G P+ I+KNLRIC DCH M+++SK+++R+I++RD NRFHHF G CSCR++W Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGY-------------------------------VMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI------DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDE-SQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 4.090e-136 Identity = 204/488 (41.80%), Postives = 302/488 (61.89%), Query Frame = 1 Query: 394 VELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 V++AR +F+ MP + +SW S+L GY +G+I+ A E FE MP + +++CN MI G+G+ G A VF M RD TW MI A+ + L LF +M GVRP P+++S+LS A L ++ G+ +H ++ + D+ ++ S L+ MY KCG++ A VF + ++ WNS+ISG A HGL EA+++F EM + P+ +T + +L+AC++ G ++EG FE+M+ KF + P ++HY C VD+LGR+G +++A+E+I +M +PD +W A+L A H+ + L AA + E P ++ YVLLS+I A +W DV+ VR MR V K PGCS I + KVH F G N +L LE+ L+ GY PD + V D++E EK L HSE+LA+A+GL +PEGVPI ++KNLR+C DCH ++L+SK+ R+II+RD NRFHHFN G CSCR+YW Sbjct: 219 VDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV-YVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704 HSP 2 Score: 110.153 bits (274), Expect = 8.876e-24 Identity = 88/367 (23.98%), Postives = 158/367 (43.05%), Query Frame = 1 Query: 358 NSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIH-----------------------------------------------GYIFSNKILDNYNFIG----------SALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEG-QFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKH 1284 NS+V G+ + AR +FD+M R+++SWN L+SGY+K I AR VFE MP+R++VS M+ GY + G+ AE +F M R+ V+WT M + + + K L+ +M+ + D A +++ + G V+E + I GY S +I D F +A+I + + G+I A VF + R+ W MI G EA++LF +M++ ++P + + +LS C + G Q + ++ +F + ++ + + G L +A +++ + D+++W +I+ H Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY-DMMPV---KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVF-DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNSIISGYASH 410 HSP 3 Score: 100.138 bits (248), Expect = 1.269e-20 Identity = 76/298 (25.50%), Postives = 142/298 (47.65%), Query Frame = 1 Query: 385 LGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAV--VSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCA 1272 +G + AR FD + + + SWNS++SGY G AR++F+ M +R++VS N ++ GY K+ + A VF M R+VV+WT+M+ ++ + LF M P+ V + + D G +++ + ++ + ++ + N IG + G+++ A +F + RNV W +MI+G + A +LF+ M + ++++ +L G +++ + +FE M +K P I IV G G + +A V M + D W+ ++ A Sbjct: 30 IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGG-----LCREGRVDEARLIFDEM-RERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVG-FGEVGEISKARRVFDLME-DRDNATWRGMIKA 305 HSP 4 Score: 61.6178 bits (148), Expect = 1.494e-8 Identity = 50/199 (25.13%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 205 HALSCFHDMR--GIEFFVPP---TLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQR----DLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVT-----WTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSA 759 AL F M+ G+ P L C +L+ G+Q+ +++ +D +V + L+ M ++ G + A+ VFD+ ++D+I WNS++SGY G + A ++F MP + V+ ++ G E E+F M + VT ++ + Q K + L S+ ++PDA ++L A Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE---SMTIKPDATVWGALLGA 509
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 2.942e-134 Identity = 209/560 (37.32%), Postives = 324/560 (57.86%), Query Frame = 1 Query: 178 PYDAISVFAHALSCFHDMRGIEFFVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERMPQRDLVSCNTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSNKILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 P + + LS +D++ + V ++AC E G Q+ G ++ NDP V L+ + ELG ++ VF+ +P D + ++++ + G + AR++FE MP+R D + W +MIS + + ++ L +F M GV+ + A++SVLSA LG +++G+W H YI NKI + + L+++YAKCG +E A VF + +NV W+S ++GLA +G + +ELF M++ + P+ +TF+ +L C+ G +DEGQ +F++M+ +F I P+++HYGC+VDL R+G LE A+ +I MP +P +W ++L AS + N+ LG A+ + LEL + YVLLSNIYA WD+VS VR M+ +GVRK PGCS + ++G+VH+F VG + Y Q + + +++ +L+ GY+ D V DI+E EKE L LHSEK A+AFG+ S+ E VPI IVKNLR+C DCH ++SKI+NR+II+RD+NRFHHF G CSC +W Sbjct: 87 PEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPER-------------------------------DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVR-LATTLVDLYAKCGDMEKAMEVFWGM-EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQ-IDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1) HSP 1 Score: 409.453 bits (1051), Expect = 4.029e-134 Identity = 219/578 (37.89%), Postives = 329/578 (56.92%), Query Frame = 1 Query: 247 FVPPTLKACGKSCALEEGKQIMGFILKTHLWNDPFVTNSLVRMCLELGMVELARSVFDKMPTRDLISWNSLLSGYLKAGQIDMAREVFERM------PQRDLVSC---------------------------------NTMIDGYGKHGLCELAEEVFMDMGVRDVVTWTSMISAFVLNHQPKKGLCLFREMLSLGVRPDAPAVVSVLSAIADLGFVEEGKWIHGYIFSN--KILDNYNFIGSALINMYAKCGQIENAYHVFRSICHRRNVGDWNSMISGLAFHGLAPEAIELFQEMERAKLKPDDITFLGLLSACNHGGLMDEGQFYFETMQIKFKIVPKIQHYGCIVDLLGRSGCLEQALEVIHNMPFEPDVLIWKAILCASMKHNNVVLGHTAALRALELAPQDSSCYVLLSNIYAKMGRWDDVSKVRSMMRKRGVRKIPGCSSILMDGKVHQFLVGKAMNVGYNQSVLSKLEEVVSKLKSEGYEPDLNEVFLDIEECEKESQLILHSEKLALAFGLSSIPEGVPIHIVKNLRICSDCHTFMQLVSKIYNRQIIIRDQNRFHHFNKGCCSCRNYW 1857 F LK C L +G+ + IL++ +D + N+L+ M + G +E AR VF+KMP RD ++W +L+SGY + + A F +M P +S + ++D Y ++GL + A+ VF + R+ V+W ++I+ +K L LF+ ML G RP + S+ A + GF+E+GKW+H Y+ + K++ F G+ L++MYAK G I +A +F + +R+V WNS+++ A HG EA+ F+EM R ++P++I+FL +L+AC+H GL+DEG Y+E M+ K IVP+ HY +VDLLGR+G L +AL I MP EP IWKA+L A H N LG AA EL P D +V+L NIYA GRW+D ++VR M++ GV+K P CS + ++ +H F+ + + + K EEV++K+K GY PD + V + +++ E+E L HSEK+ALAF L + P G IHI KN+R+C DCHT ++L SK+ R+II+RD NRFHHF G CSC++YW Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV---AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERH-PQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633 The following BLAST results are available for this feature:
BLAST of Phvul.005G124400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.005G124400.1_Pv_G19833_v2.1 >Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=620bpback to top mRNA from alignment at Chr05:36141181..36143444- Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1; organism=Phaseolus vulgaris; type=mRNA; length=2264bp; location=Sequence derived from: Chr05:36141181..36143444- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr05:36141181..36143444- >Phvul.005G124400.1_Pv_G19833_v2.1 ID=Phvul.005G124400.1_Pv_G19833_v2.1; Name=Phvul.005G124400.1; organism=Phaseolus vulgaris; type=CDS; length=1860bp; location=Sequence derived from: Chr05:36141181..36143444- (Phaseolus vulgarisback to top |