Phvul.005G124800.1

Transcript Overview
NamePhvul.005G124800.1
Unique NamePhvul.005G124800.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05supercontigChr05:36197512..36201222 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL016Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL108Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL467Pisum sativum Cameor genome v1aPisum sativum
pspvL477Pisum sativum Cameor genome v1aPisum sativum
pspvL832Pisum sativum Cameor genome v1aPisum sativum
pvvuR472Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR481Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR493Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0050Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0289Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL075Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL043Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL233Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL621Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0908Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1032Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1033Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1113Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0334Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0665Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0780Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1224Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1378Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL156Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL533Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR469Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR483Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR485Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR481Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR523Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR534Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR478Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR520Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR529Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR455Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR457Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR408Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR417Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR429Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR535Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR556Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR582Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR599Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL037Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL215Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL604Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL090Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL669Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL053Cicer arietinum
carpvL223Cicer arietinum
carpvL336Cicer arietinum
carpvL598Cicer arietinum
ccapvL124Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL289Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL379Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL482Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR534Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR537Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR558Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR516Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR517Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR531Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR535Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR559Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR532Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR536Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR561Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR429Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR444Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR457Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR439Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_06G01091.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0719400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_00787.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Hedin2.R1.6g018960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g043760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004487449.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058878959.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_23755.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_17090Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun11g127500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014637848.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_034646Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.07G055300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00589.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr05.2249Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_09550.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.07G072800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va05G048080.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_07051Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.1g063320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan05g169100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat07G0443800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan08g138500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun05g237000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_03178Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g256840.1Pisum sativum Cameor genome v1aPisum sativum
jg7760.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_01335.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004506110.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_23652Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_022382Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_16482Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014641994.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va08G059160.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun11g127500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr11.1223Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.6g013960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.06G166800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g237000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058917719.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.06G149300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg44212.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.819Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.011G093300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr11.1000591Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.005G124800Phvul.005G124800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124800.1Phvul.005G124800.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.005G124800.1_Pv_G19833_v2.1Phvul.005G124800.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124800.1.v2.1.five_prime_UTR.1Phvul.005G124800.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124800.1.v2.1.CDS.1Phvul.005G124800.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G124800.1.v2.1.CDS.2Phvul.005G124800.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G124800.1.v2.1.three_prime_UTR.1Phvul.005G124800.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.146e-112
Identity = 189/338 (55.92%), Postives = 213/338 (63.02%), Query Frame = 1
Query:   19 NVENKNLCLQTPTFIEWLEPSSSLTGSISPPPXXXXXXXXXXXX-----------------------ETIQFLPFKEDHGVKRDGLXXXXXXXXXXXXALHIGLP--HTGDPDPDEHDGSD---------------EKKVFHVKEEEPLKKSFQGCSFNQE---RRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT-QPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPS--HEGFVEDEKECVT 894
            + E K L  ++P+FIEWL+P SS T S S      +      S                         +IQ LP               +E+ +   V L IG P  H G  +    DGSD               E  V  +K+   +K   +    + E   +RFWIP+PAQI VGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKG DSLKGT QPAA+LRLPCYCCA+GCKNNINHPR+KPLKDFRTLQTHYKRKHG+KPF C KC K+ AVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFG GHSPHPS   +GF ED  ECVT
Sbjct:    3 SYETKGLSFESPSFIEWLKPQSSTTSSKSVLYRGKTRDAISRSNHHQSQMNMLERSLFLYQPQEPLNTSIQCLPLLNKLMENNSQASDIKEENKDDVVTLQIGFPKYHRGSSE----DGSDITFDHQKKPIKREIIEDGVVMMKKRRKMKFDEEIIDSDVEVCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEED-TECVT 335          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.996e-99
Identity = 137/211 (64.93%), Postives = 159/211 (75.36%), Query Frame = 1
Query:  247 LHIGLPHTG-----------DPDPDEHDGSDEKKVFHVKEEEPLKKSFQGCSFNQERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            LH+GLP+ G           D   DE D   ++ V    E             ++   +WIPTP+QIL+GP QF C +C KTFNRYNNMQMHMWGHGS++RKGP+SL+GTQP  MLRLPC+CCA GCKNNI+HPRAKPLKDFRTLQTHYKRKHG+KPF CR C K+FAVKGDWRTHEKNCGKLWYC+CGSDFKHKRSLKDH+++FG GH P
Sbjct:  105 LHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 315          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.870e-97
Identity = 129/166 (77.71%), Postives = 150/166 (90.36%), Query Frame = 1
Query:  385 RFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSHEGFVEDEK 882
            ++WIPTP+QIL+GP QF+C +C KTFNRYNNMQMHMWGHGS++RKGP+SL+GTQP  MLRLPCYCCA GC+NNI+HPRAKPLKDFRTLQTHYKRKHG KPFMCRKC K+FAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDHI++FG GH  +   +GF E+++
Sbjct:  201 QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAY-GIDGFDEEDE 365          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 1.235e-96
Identity = 126/158 (79.75%), Postives = 144/158 (91.14%), Query Frame = 1
Query:  373 NQERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            N    FWIPTP+QIL+GP QF+C +C KTFNRYNNMQMHMWGHGS++RKGP+SL+GTQP AML+LPCYCCA GCKNNI+HPRA+PLKDFRTLQTHYKRKHG +PF CR+C K+FAVKGDWRTHEKNCGKLWYC+CGSDFKHKRSLKDH+++FG GH P
Sbjct:  236 NHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 393          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.865e-93
Identity = 133/211 (63.03%), Postives = 165/211 (78.20%), Query Frame = 1
Query:  244 ALHIGLPHTGDPDPDEHDGSDEKKVFHVKEEEPLKKSFQGCSFNQERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAA-MLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRK-CSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSHEGFV 870
            ALHIG P            SD++ +     +E L          ++ ++WIP+ +QILVGP QF+CS+C+KTFNR+NNMQMHMWGHGS++RKGP+SL+GT+ ++ +LRLPCYCCA+GCKNNI+HPR+KPLKDFRTLQTHYKRKHGAKPF CRK C K+FAV+GDWRTHEKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+ H   +  V
Sbjct:   57 ALHIGPP-----------SSDKETLSGGNNQEGLTA--------RQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTVSDRVV 248          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 3.108e-91
Identity = 129/213 (60.56%), Postives = 158/213 (74.18%), Query Frame = 1
Query:  247 LHIGLPHTGDP--DPDEHDGSDEKKVFHVKEEEPLKKSFQGCSFNQERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSHEGFVEDE 879
            LHIGLP  G P  D  +    + K++      + ++    G      + +WIP P QIL+G   F+C +C KTFNRYNN+QMHMWGHGS++RKGP+SLKGTQP AML +PCYCC +GC+N+I+HPR+KPLKDFRTLQTHYKRKHG KPF CR C K  AVKGDWRTHEKNCGK W C CGSDFKHKRSLKDH+++FG GH P+P+  G  E++
Sbjct:   87 LHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIENELSG------KAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPT--GLFEEQ 291          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana OX=3702 GN=STOP1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.038e-26
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  415 LVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGP-------DSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKC-SKSFAVKGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            ++ P    C+IC K F R  N++MHM GHG E++          +S+ G++P  + R  C     GCK N  H + +PLK    ++ HYKR H  K F C +C +K F+V  D +THEK+CGK  W C+CG+ F  K  L  HI  F +GH+P
Sbjct:  238 ILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFL--GCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGHTP 387          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: STOP1_ORYSJ (Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0871200 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.877e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  415 LVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPC--YCCAQ-GCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKC-SKSFAVKGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            ++ P    C IC K F R  N++MHM GHG E++      K ++ +++   P   Y C   GCK N  H + +PLK    ++ HYKR H  K + C +C +K F+V  D +THEK+CG+  W C+CG+ F  K  L  H+  F +GH+P
Sbjct:  276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALF-QGHTP 423          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: STOP2_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 OS=Arabidopsis thaliana OX=3702 GN=STOP2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.883e-23
Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  415 LVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGT----QPAAMLRLPCYCCAQ-GCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCS-KSFAVKGDWRTHEKNCGKL-WYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            L+      C IC K F R  N++MHM  HG E++     +  T    +    L+   Y C Q GC+ N  H + +PLK     + HYKR H  K +MCR+CS K F+V  D RTHEK+CG + W C+CG+ F  K  L  H+  F  GH P
Sbjct:  211 LLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLF-LGHVP 360          
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Match: ART1_ORYSJ (Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica OX=39947 GN=STAR3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.996e-20
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  415 LVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPC-----YCCAQ-GCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKC-SKSFAVKGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIRSFGKGHSP 846
            ++ P    C IC K F R  N++MHM GHG E++      K   P      P      Y C   GCK N  H   +PLK    ++ HYKR H  K  +C +C +K F+V  D +THEK+CG+  W C+CG+ F  K  L  H+  F +GH+P
Sbjct:  223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALF-QGHAP 373          
The following BLAST results are available for this feature:
BLAST of Phvul.005G124800.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ZWIP3_ARATH4.146e-11255.92Zinc finger protein WIP3 OS=Arabidopsis thaliana O... [more]
ZWIP5_ARATH5.996e-9964.93Zinc finger protein WIP5 OS=Arabidopsis thaliana O... [more]
ZWIP2_ARATH6.870e-9777.71Zinc finger protein WIP2 OS=Arabidopsis thaliana O... [more]
ZWIP4_ARATH1.235e-9679.75Zinc finger protein WIP4 OS=Arabidopsis thaliana O... [more]
ZWIP6_ARATH9.865e-9363.03Zinc finger protein WIP6 OS=Arabidopsis thaliana O... [more]
TT1_ARATH3.108e-9160.56Protein TRANSPARENT TESTA 1 OS=Arabidopsis thalian... [more]
STOP1_ARATH7.038e-2639.87Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Ara... [more]
STOP1_ORYSJ3.877e-2438.26Zinc finger protein STOP1 homolog OS=Oryza sativa ... [more]
STOP2_ARATH1.883e-2339.74Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 OS=Ara... [more]
ART1_ORYSJ3.996e-2038.16Zinc finger protein STAR3 OS=Oryza sativa subsp. j... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 192..224
e-value: 190.0
score: 2.0
coord: 229..249
e-value: 56.0
score: 6.7
coord: 145..167
e-value: 0.17
score: 21.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 147..167
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 145..172
score: 10.45
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 145..164
e-value: 1.2E-4
score: 22.0
NoneNo IPR availableGENE3D3.30.160.60coord: 143..167
e-value: 6.8E-6
score: 27.8
NoneNo IPR availableGENE3D3.30.160.60coord: 227..276
e-value: 7.7E-6
score: 28.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..308
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 114..168
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 215..249

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.005G124800.1_Pv_G19833_v2.1

>Phvul.005G124800.1_Pv_G19833_v2.1 ID=Phvul.005G124800.1_Pv_G19833_v2.1; Name=Phvul.005G124800.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=309bp
MSFRECNVENKNLCLQTPTFIEWLEPSSSLTGSISPPPSSLSHQHDQLSQ
ETIQFLPFKEDHGVKRDGLEVKEEKVEQVTVALHIGLPHTGDPDPDEHDG
SDEKKVFHVKEEEPLKKSFQGCSFNQERRFWIPTPAQILVGPMQFACSIC
SKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKN
NINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKN
CGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSHEGFVEDEKECVTGS
DEDEVAHT*
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mRNA from alignment at Chr05:36197512..36201222+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.005G124800.1_Pv_G19833_v2.1 ID=Phvul.005G124800.1_Pv_G19833_v2.1; Name=Phvul.005G124800.1; organism=Phaseolus vulgaris; type=mRNA; length=3711bp; location=Sequence derived from: Chr05:36197512..36201222+ (Phaseolus vulgaris
GATTCTTTTCACTAAATTGGCCATTCCTGTTTTCCATGTCATTTTCTATC CCCACCAATTAGTCTCCCTTTTTCTCTCACCAAAAAGAAACAAACAAAGC CCAACAGAGGAGAAAGAGAAAAAGTAAGGGTAGAAAAAAATAAAGGAAGA GAAAAAAGAAACACTCAAAGGCAAAAGAAAAGAAAGCTTGATTTCATTGA TCAATAAGTGCAGGCTTTCTTTCATAAAGTTTGGATAGGCTTTTCTTCTG AGTAGAGGATTTCACAGATCCTTGGACTTCTGAAGAACATGAGTTTTAGA GAGTGCAATGTAGAAAACAAGAATCTGTGTCTTCAGACCCCGACTTTTAT TGAGTGGCTCGAACCATCTTCTTCTCTAACAGGTTCAATATCACCACCAC CTTCTTCCTTGTCTCATCAGCATGATCAACTTTCCCAAGAAACGATCCAG TTTTTGCCCTTCAAGGAAGACCATGGAGTGAAAAGGGATGGTTTAGAAGT GAAAGAAGAGAAGGTGGAACAGGTGACTGTGGCTTTGCACATTGGATTGC CTCACACAGGAGACCCTGACCCTGATGAACATGATGGCAGTGATGAGAAG AAGGTTTTCCATGTAAAGGAAGAAGAGCCCTTGAAGAAAAGCTTCCAGGG TTGTTCTTTTAACCAGGAGAGAAGATTTTGGATACCAACTCCTGCACAGA TCCTTGTAGGACCGATGCAGTTTGCTTGCTCCATATGCAGCAAGACCTTC AATAGATATAACAATATGCAGGTTAGTTGCTTCTCATCTTCTGGTGTAAA CAACACACACAGATTTTCTATTATTTCCACATAAATTAACTTGTTTTTAA AGAAACACCTAATTAAAACTACCAATTATGCAAGGATGTACCTTCCTAAA TAATATTGTGTGGGAACTTACAATTAAGCATCTCATTACTGCTTGAAAGG AAAATCCTGCATGATTTTCATATCAAACGCATACCTATCACATGGTTTAC ACTTCAATTTCGTCTCTATATACAAGTACCATATATAACAAAATAGAATC TAACACCAGTTCAACACATAGTAAGTTGGGAAATGGAATCTTTTGTTTTT GTATTGTATCTGAAAGCATAGCTCCTTTGGAACGTTGTACTGTTTGAGAT TTACAATAATTAATAATATATGTATCAGTTTTCTTCACAATGATTTCACT GTTGCAAGCAATTCTATATCATATCATTCAAGCAACATATCGTAATTAGT ATGTGAATATGTATGTTTGTCACTTCATTTCAATTTCAATTTGATAGTAT CATCTATAAACTATATACTGAGGACAAATATCAGTGCCCAGATAAAATTA AGGGAATTTGCACTAAAATCTCTACTCAGAATTTGAATTCCCTGTCCAAG CCTACCTCTGAACTAGGTGTTTTTCATGATGATGATGAAGACTAAAACAA TCATTTAAATGAACTTTAATAGCTATATAAACATGACTCTTAATGACTGT CTTTTTCTTTTGCTTTTTTTTGTTTCACTTTAACAAATTTGTGTTATGGC CTATTGCCCCGCCACCACCACCACCATCTTCAACTTTTAGCAAAAGGCTC CTTTTAAACCATAGGATTTCAAAGGGAAGCTGAACTTCCATATCTTCATG CTTTTCTTTTTTTTCTTTCCGTGTGTGTATGTTTGTCCTTTTGGGTTGGA AACTTCATCAGCATATAGGAACTAATTAATCGTAGGTGTTTGAGGCATGC ATGCAGTGTAGCACAAGATCTACCATAGCAAATTCTTTTGAACAATAACT ATGCCTTTAAAAAAACATTTATATAGGGAAGAGAAGGCACACAATCTTCC AATCTTTAAGAGGCATTATGTATCACTATTAATTAGATTACTAAAATCAC TTATCTTTTCCTTTTTTTGCCTTTAATTGAGTTAATAACAACTAATTAAT GACCATGGCCACTGCTTGTCCATATAAAGACCAACATAGGTAGGTTATAT TAGTGGATGGAAATCATTTGTTCTCCATTCTTTTATCTTTCAAATTAAAA AGCAAAATCTGTGATTAGAAAGTATGTTTTCTTTTTTATTTTTAGTTTTT TTTTATTTACATGCTTGCTTTTAATCACTCACAAAGAGGACATTTGATTT GGATTCCAAATAAAGCATTATTTAAGGATTAAGTTGATGATCCTAATTTG AAGCAAGTTTTTGGGATCAATTACAAATGAATATGTTCAACAAACTCATG TATAAAGTAGTATTGTCCTCTTTTAATAAAATTTGTTTCGGATTTTTTGT GAACAAAAGAATTTATTAATGATATATGAAAATATTTAAAAATAAGTACA CAATGTATGCCAATTTAAGTCTACAGCACACTTAATATTAAACCAAAGAA GTGTGAAAAAAAAAAACCATACTTCACGGATTAGAAATGTTCATTATATA TTTACTTCCTTCTCTACTTTCATTTATTTTTTGAATGTTTTTTTCTTGTC TCAAGGTTTGTTATATTTATCTTTTTTTTCCTCTCTTCTTTTTCACCCAT ATATCTTAAACTTGATAATGTTATTAGTGTAAAATATATTTCACATTATT AAATGAAAATTTTCATCAAAAAATTTAATTGACTACTTTTAATAAAAAAT AGACAATAATAACATTTTTTTCATTATTTAAAATAGACACAACTCCAGCC ATGTAGTTAATATATGATCAATTCTCTCTTAAAAATTGAAAAAACCTCTT ACATTTATCTTAAGGATATTAATCATACTGTTAAACATAACATGGAAGTA TCTGATAGTCATTTACTCAATTTATTATTATGATTATTATGATCAATTTA ACAAGAACCTTGACAATTTGCAGATGCATATGTGGGGGCATGGATCCGAA TTTAGGAAAGGACCAGACTCACTTAAAGGAACACAACCAGCAGCAATGCT AAGGCTACCATGTTACTGTTGTGCCCAGGGTTGCAAGAACAACATCAATC ATCCAAGAGCTAAGCCATTGAAGGACTTCAGAACTCTCCAAACCCACTAC AAAAGAAAGCATGGTGCAAAACCATTTATGTGCCGAAAGTGCTCAAAATC CTTTGCAGTTAAAGGGGATTGGAGGACTCACGAAAAGAACTGCGGAAAGT TGTGGTATTGCACTTGTGGTTCAGATTTTAAGCACAAAAGGTCCCTCAAA GATCATATCAGATCCTTTGGAAAAGGCCACTCCCCACATCCTTCTCATGA AGGCTTCGTTGAGGATGAGAAGGAATGCGTTACTGGATCTGATGAAGATG AAGTTGCTCATACGTGATATGTAACATGCTATATGTATATATATTTATAG GTTTTGTCTAAATTAACTCAAGTAAAAATGGAACTAAACAATCTCATGAT TGGTGCAATTAATACATGTAACCAACCATCTTAAAGTATACAAGAGAAGA TGGTTTAAGTTCATTTTCACTTGAAATAAGTTAGACAATTTCTGTATAAA TAGGTTTATTTATTAAAGAGTAGTAGTACTAAGTGTAGCAGATGTTACTG CTGCATGCCCTTGTGCTCAGTAGCAAAAAATTCTCGACAATTACTGAGGG AATTAGGGAGCGGTTTGCTACCGAGCACTTGCAGGGTGTGATAGGTGTGC ACCAGTTTGCTTTGTGGTTAATTAATAAGATTATGGTTCCTCAAGTGATG AAGCGTATGAT
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Coding sequence (CDS) from alignment at Chr05:36197512..36201222+

>Phvul.005G124800.1_Pv_G19833_v2.1 ID=Phvul.005G124800.1_Pv_G19833_v2.1; Name=Phvul.005G124800.1; organism=Phaseolus vulgaris; type=CDS; length=927bp; location=Sequence derived from: Chr05:36197512..36201222+ (Phaseolus vulgaris
ATGAGTTTTAGAGAGTGCAATGTAGAAAACAAGAATCTGTGTCTTCAGAC
CCCGACTTTTATTGAGTGGCTCGAACCATCTTCTTCTCTAACAGGTTCAA
TATCACCACCACCTTCTTCCTTGTCTCATCAGCATGATCAACTTTCCCAA
GAAACGATCCAGTTTTTGCCCTTCAAGGAAGACCATGGAGTGAAAAGGGA
TGGTTTAGAAGTGAAAGAAGAGAAGGTGGAACAGGTGACTGTGGCTTTGC
ACATTGGATTGCCTCACACAGGAGACCCTGACCCTGATGAACATGATGGC
AGTGATGAGAAGAAGGTTTTCCATGTAAAGGAAGAAGAGCCCTTGAAGAA
AAGCTTCCAGGGTTGTTCTTTTAACCAGGAGAGAAGATTTTGGATACCAA
CTCCTGCACAGATCCTTGTAGGACCGATGCAGTTTGCTTGCTCCATATGC
AGCAAGACCTTCAATAGATATAACAATATGCAGATGCATATGTGGGGGCA
TGGATCCGAATTTAGGAAAGGACCAGACTCACTTAAAGGAACACAACCAG
CAGCAATGCTAAGGCTACCATGTTACTGTTGTGCCCAGGGTTGCAAGAAC
AACATCAATCATCCAAGAGCTAAGCCATTGAAGGACTTCAGAACTCTCCA
AACCCACTACAAAAGAAAGCATGGTGCAAAACCATTTATGTGCCGAAAGT
GCTCAAAATCCTTTGCAGTTAAAGGGGATTGGAGGACTCACGAAAAGAAC
TGCGGAAAGTTGTGGTATTGCACTTGTGGTTCAGATTTTAAGCACAAAAG
GTCCCTCAAAGATCATATCAGATCCTTTGGAAAAGGCCACTCCCCACATC
CTTCTCATGAAGGCTTCGTTGAGGATGAGAAGGAATGCGTTACTGGATCT
GATGAAGATGAAGTTGCTCATACGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding