Phvul.005G126000.1

Transcript Overview
NamePhvul.005G126000.1
Unique NamePhvul.005G126000.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05supercontigChr05:36321984..36323717 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL016Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL108Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL467Pisum sativum Cameor genome v1aPisum sativum
pspvL477Pisum sativum Cameor genome v1aPisum sativum
pspvL832Pisum sativum Cameor genome v1aPisum sativum
pvvuR472Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR481Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR493Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL075Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL043Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL233Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL621Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0816Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0908Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1033Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0149Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0334Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0665Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0780Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0871Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1169Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1224Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1378Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL156Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL533Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR469Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR483Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR485Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR481Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR510Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR523Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR478Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR520Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR455Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR457Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR408Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR417Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR429Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR535Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR556Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR582Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR599Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL037Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL215Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL604Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL090Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL669Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL053Cicer arietinum
carpvL223Cicer arietinum
carpvL336Cicer arietinum
carpvL598Cicer arietinum
ccapvL124Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL289Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL379Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL482Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR534Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR537Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR558Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR516Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR517Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR531Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR535Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR559Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR532Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR536Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR561Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR429Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR444Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR457Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR439Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Va03G074940.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.04G343600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.1g044280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_07888.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014641707.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun01g171800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_04G02501.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_30164Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat06G0218600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.3g047440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_040485Cajanus cajan Asha genome v1.0Cajanus cajan
Psat05G0717800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg1121.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_04342Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.04G222000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan05g170400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun05g238400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_23642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_28574Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058917732.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_010339Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.07G054300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg44238.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun01g171800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan03g240500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.07G071400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_02997.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_07G00578.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058915243.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va05G048390.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g064000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004487458.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_07041Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014639921.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr01.1643Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun05g238400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_03185Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.001G188201.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1001282Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr05.828Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.005G126000Phvul.005G126000_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G126000.1Phvul.005G126000.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.005G126000.1_Pv_G19833_v2.1Phvul.005G126000.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G126000.1.v2.1.five_prime_UTR.1Phvul.005G126000.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.005G126000.1.v2.1.five_prime_UTR.2Phvul.005G126000.1.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G126000.1.v2.1.CDS.1Phvul.005G126000.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G126000.1.v2.1.CDS.2Phvul.005G126000.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.005G126000.1.v2.1.CDS.3Phvul.005G126000.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.005G126000.1.v2.1.three_prime_UTR.1Phvul.005G126000.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.400e-15
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MKV+AA+LLA+LGGN SP+  D+K IL++VGADA+++ I LLL +VKGKD  EL+ASGRE++
Sbjct:    1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.055e-15
Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 336
            MK VAAYLLAVL GN SPSA D+  IL +VG + + E + LLL ++ GKD  EL+A+GREK ++V  GGG     AAAPA G AAPAAEAK+E+KVEEKEESDDDMGFSLFD
Sbjct:    1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.350e-15
Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 336
            MKV AA+LLAVLGGN +PSA +IK I+ AVGAD + E I LLL+EV GKD  EL+ASGREK+ A    GG     AA  +GG  A A   K+E K EEKEESDDDMGFSLF+
Sbjct:    1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL-ASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.039e-14
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MKVVAAYLLAVL G  SP++ DIK IL +VGA+ E+  I LLL+EVKGKD  EL+A+GREK+
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.455e-14
Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKIXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 336
            MKV+AAYLLAVLGGN SP+A D+K IL +VGA+A+EE +  LL E+K KD  E++A+GRE++S+V SGGG   +   AA AGG AAPA EAK+E+KVEEKEESD+DMGFSLFD
Sbjct:    1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.450e-13
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MKVVAA+LLAVL G  SP+  DIK IL +VGA+ E+  I LLL+EVKGKD  EL+A+GREK+
Sbjct:    1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae OX=7739 PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 7.016e-13
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            M+ VAAYLLAVLGGN +PSA DIK IL +VG DAE+E +  ++ E+KGKD  E++A+GR K+
Sbjct:    1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA23_ARATH (60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana OX=3702 GN=RPP2C PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.368e-11
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MKV+AA+LLA LGGN +P++ D+K IL +VGA+ +E  I LL   +K  D  EL+A+GREK+
Sbjct:    1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKM 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA25_ARATH (60S acidic ribosomal protein P2-5 OS=Arabidopsis thaliana OX=3702 GN=RPP2E PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.391e-11
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MKVVAAYLLA L GN +PS  D+K I+ +VGA+ ++E I L    +K +D  EL+A GREK+
Sbjct:    1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGREKM 62
[Close]
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Match: RLA2_SCHPO (60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpp201 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.797e-10
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:    1 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADXXXXXXXXXXXXVKGKDFNELLASGREKI 186
            MK +AAYLL  +GG  SPSA+DI+ +LS VG +AE E I  L+ E+ GKD +EL+A+G EK+
Sbjct:    1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKL 62
The following BLAST results are available for this feature:
BLAST of Phvul.005G126000.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RLA2_PARAR1.400e-1562.9060S acidic ribosomal protein P2 OS=Parthenium arge... [more]
RLA2A_MAIZE2.055e-1565.1860S acidic ribosomal protein P2A OS=Zea mays OX=45... [more]
RLA24_ARATH7.350e-1561.6160S acidic ribosomal protein P2-4 OS=Arabidopsis t... [more]
RLA22_ARATH1.039e-1466.1360S acidic ribosomal protein P2-2 OS=Arabidopsis t... [more]
RLA2B_MAIZE2.455e-1465.4960S acidic ribosomal protein P2B OS=Zea mays OX=45... [more]
RLA21_ARATH1.450e-1364.5260S acidic ribosomal protein P2-1 OS=Arabidopsis t... [more]
RLA2_BRAFL7.016e-1359.6860S acidic ribosomal protein P2 OS=Branchiostoma f... [more]
RLA23_ARATH1.368e-1153.2360S acidic ribosomal protein P2-3 OS=Arabidopsis t... [more]
RLA25_ARATH2.391e-1153.2360S acidic ribosomal protein P2-5 OS=Arabidopsis t... [more]
RLA2_SCHPO1.797e-1054.8460S acidic ribosomal protein P2-alpha OS=Schizosac... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001859Trypanosoma cruzi ribosomal protein P2-likePRINTSPR00456RIBOSOMALP2coord: 21..32
score: 25.0
coord: 76..90
score: 74.67
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 17..111
e-value: 7.9E-24
score: 84.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..112
NoneNo IPR availableCDDcd05833Ribosomal_P2coord: 1..112
e-value: 3.72109E-21
score: 79.2296
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..59
e-value: 1.8E-23
score: 84.4
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 2..112
score: 15.91

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.005G126000.1_Pv_G19833_v2.1

>Phvul.005G126000.1_Pv_G19833_v2.1 ID=Phvul.005G126000.1_Pv_G19833_v2.1; Name=Phvul.005G126000.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=113bp
MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADAEEELIALLLEEVKGKD
FNELLASGREKISAVSGGGGAAVAVAAAPAGGAAAPAAEAKEEKKVEEKE
ESDDDMGFSLFD*
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mRNA from alignment at Chr05:36321984..36323717+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.005G126000.1_Pv_G19833_v2.1 ID=Phvul.005G126000.1_Pv_G19833_v2.1; Name=Phvul.005G126000.1; organism=Phaseolus vulgaris; type=mRNA; length=1734bp; location=Sequence derived from: Chr05:36321984..36323717+ (Phaseolus vulgaris
AAGTATTAGAGGTTTACATTACACCACATAAAGTGAATATTATATGAGAT
AATATACAAAATTTCAGTTTCTTGAGAAGTAAAAAGCAAAAATTGTTACA
AAAAGAACATAATCACTATTTTTGTAGGACTTAAAAACATATTTCCGTAG
CATAAAAAAAGAGACACAACTAAAAAATAAATATTTAAAAAATAGAAAGA
ATACTAAGTCTTATTTTTGTAGAATAATATAGAATTATGTTTGATCTTTT
GTTTTATATAATTTCTTCTTGAAGATTTTATGTCATATTAGAGAAAATGA
AAAAATAATAATGAGAAGTTTACCTAATTGTAAGGAGGGGCATTACGGGA
AATAAGAAAGATGAAACCTCAAGAGCTGAAAACCCTAGTTATATATTAGG
TCTCTGCATTCTCATTCTGCGCCTCTCGCTCTGCACAAACCCTAATTCCA
AACTCAGAAGCGAAATAACGGCAATTCAGAAAGTGGGTTTTCATGCTCTC
ACATCCAATTTCATTTTGCACGTGTTGTGTTATGTTGTTGATCTGTGTCA
CTAACAAATGTAATGTTGGTGTGTGATTTCTTGAATCCAGATATGAAGGT
GGTGGCTGCTTATTTGCTTGCAGTGTTGGGAGGGAACCCATCTCCTTCTG
CCACTGATATCAAACACATTCTTAGCGCAGGTTTTCACTATTTTTCATGA
TTTTTCACTTGCCGTAGTTTTATGCTTTATTTTCACCTGCCACAGTTTTT
GTTGTTAATATTATTTTTTAGTTGCTATTATTTGGATTGTTTGTTGTTTT
CTGTGTCGATGGTTGAATCCAGTACGATGTTGTAGTTTTTACTCTTCCAC
CCTAGATTTCTGAAGTGGATTTGCAAGGGTACAATTTCTGTATTCAATGC
TAGAATGTTGGCAAAAAGATTTTTTTTTTCTTTTAATTTTAAGGTTGGTG
TGGTTTGGTTTGTAGAATTAATTATCAGAATGCGGAAATCATACTATGAG
GATGTATTAGCACAATGTTGTATTAGATACTAGAATGTTGGAAAAATTCA
CATTTTTTTATTTTGAAATTTAGTTAGGTTTGGTTTGTAGAATTAACAAC
CAGAAAATTACTATGAGAATGTGATATTTTGTTGAATATTTGGTTAATCT
ATATAGTTTTGTAATACTAACTCTGCATTTTCTTTCCAATTTTATAGTTG
GAGCTGATGCTGAGGAGGAGTTGATTGCGTTGCTCTTAGAGGAAGTGAAG
GGCAAAGACTTCAACGAACTACTAGCCAGCGGAAGGGAAAAGATTTCTGC
TGTGTCTGGCGGTGGTGGTGCTGCAGTGGCTGTTGCTGCTGCACCAGCTG
GTGGTGCTGCTGCACCTGCTGCGGAAGCAAAGGAAGAAAAGAAAGTTGAA
GAGAAGGAGGAGTCCGATGATGTAAGCTTCAAACTTGTGTCAGTTGCTTT
TGTTTGATAAATCATAATTCTCTACTGATGAATGTGTTTATCTTTGATTT
GCAGGATATGGGTTTCAGTTTGTTCGACTAAAAGGGTCTGAAGTGTTTTT
TATGTCTTACATTTGCAGTTTCATTTAGTATTTTAGCTCAATCCCAAGGT
TTTGTTACTCGAGTTACATATTGTTTTAGGTTTATGAGATTTGCTTTTTC
ACATTGGAGACGATGTAATGCTATCATACTGTCTGATATAATTTAGTAAC
TTTTGGATTTAATTTGTTTGACCGGTTATTTAGC
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Coding sequence (CDS) from alignment at Chr05:36321984..36323717+

>Phvul.005G126000.1_Pv_G19833_v2.1 ID=Phvul.005G126000.1_Pv_G19833_v2.1; Name=Phvul.005G126000.1; organism=Phaseolus vulgaris; type=CDS; length=339bp; location=Sequence derived from: Chr05:36321984..36323717+ (Phaseolus vulgaris
ATGAAGGTGGTGGCTGCTTATTTGCTTGCAGTGTTGGGAGGGAACCCATC
TCCTTCTGCCACTGATATCAAACACATTCTTAGCGCAGTTGGAGCTGATG
CTGAGGAGGAGTTGATTGCGTTGCTCTTAGAGGAAGTGAAGGGCAAAGAC
TTCAACGAACTACTAGCCAGCGGAAGGGAAAAGATTTCTGCTGTGTCTGG
CGGTGGTGGTGCTGCAGTGGCTGTTGCTGCTGCACCAGCTGGTGGTGCTG
CTGCACCTGCTGCGGAAGCAAAGGAAGAAAAGAAAGTTGAAGAGAAGGAG
GAGTCCGATGATGATATGGGTTTCAGTTTGTTCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001859Ribosomal_P1/P2_euk
IPR038716P1/P2_N_sf
IPR027534Ribosomal_P1/P2
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006414translational elongation