Phvul.006G088500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: EPHA_MYCTU (Epoxide hydrolase A OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephA PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 8.706e-53 Identity = 125/328 (38.11%), Postives = 177/328 (53.96%), Query Frame = 1 Query: 1 MEGVEHRTVEVNGIKMHVAEKGE--GPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDD-YYICRFQEPGKMETLYDNNIEEAIKNMLTSRRP---GPPILPKEGAGSNXXXXXXXXXXXXXXXXXQEDLTYYASKFGKTXXXXXXXXXXXXXXXWELTAAWTGVQVKVPVKFITGDLDIVYTSLGTKDYIE--SGAFKRDVPFLEEVVVQEGVAHFNNQEAAEDVSNHIYNFIKNF 960 M R V+ NG+++ V E GE PVV+ HGFPEL YSWRHQI AL+ GY +APD RGYG + P ++ +Y I L AD+V L+D +G ++ V HDWGA+V W L DR+ A LSVP +PR +V P A R+ +G++ +YI FQEPG + + + ++ M+ RP + G + LP+W+SQE+L +Y +F +TG TGGLN+YRN + NWE TA G + VP FI G D V T T E SG ++ EV++ +G H+ QE +V+ + F+ Sbjct: 1 MGAPTERLVDTNGVRLRVVEAGEPGAPVVILAHGFPELAYSWRHQIPALADAGYHVLAPDQRGYGGSSRPEAIEAYDIHRLTADLVGLLDDVGAERAVWVGHDWGAVVVWNAPLLHADRVAAVAALSVPALPRA-QVPPTQAFRSRFGENFFYILYFQEPGIADAELNGDPARTMRRMIGGLRPPGDQSAAMRMLAPGPDGFIDRLPEPAGLPAWISQEELDHYIGEFTRTGFTGGLNWYRNFDRNWETTADLAGKTISVPSLFIAGTADPVLTFTRTDRAAEVISGPYR-------EVLI-DGAGHWLQQERPGEVTAALLEFLTGL 319
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: HYES_RAT (Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.009e-44 Identity = 97/317 (30.60%), Postives = 165/317 (52.05%), Query Frame = 1 Query: 10 VEHRTVEVN-GIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKMETLYDNNIEEAIKNMLTSRRPGPPILPKEGAGSNXXXXXXXXXXXXXXXXXQEDLTYYASKFGKTXXXXXXXXXXXXXXXWELTAAWTGVQVKVPVKFITGDLDIVYTSLGTKDYIESGAFKRDVPFLEEVVVQEGVAHFNNQEAAEDVSNHIYNFIKN 957 V H V V GI++H E G GP + HGFPE W+SWR+QI AL+ G+R +A D++GYGD+ +P + Y + L ++V ++ LG+ Q + HDW ++ W LF P+R++A L+ P MP NP+V P++ +R++ +Y + FQEPG E + N+ K+ + + + + G+ + ++E++ YY +F K+G G LN+YRN NW+ + G ++ VP +T + DIV +K+ + +PFL+ + E H+ E +V+ + ++K Sbjct: 235 VSHGYVTVKPGIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQL-YFQEPGVAEAELEKNMSRTFKSFFRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYYIQQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDIVLRPEMSKN------MENWIPFLKRGHI-EDCGHWTQIEKPAEVNQILIKWLKT 543
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: HYES_MOUSE (Bifunctional epoxide hydrolase 2 OS=Mus musculus OX=10090 GN=Ephx2 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.253e-44 Identity = 98/317 (30.91%), Postives = 164/317 (51.74%), Query Frame = 1 Query: 10 VEHRTVEVN-GIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKMETLYDNNIEEAIKNMLTSRRPGPPILPKEGAGSNXXXXXXXXXXXXXXXXXQEDLTYYASKFGKTXXXXXXXXXXXXXXXWELTAAWTGVQVKVPVKFITGDLDIVYTSLGTKDYIESGAFKRDVPFLEEVVVQEGVAHFNNQEAAEDVSNHIYNFIKN 957 V H V V GI++H E G GP + HGFPE W+SWR+QI AL+ G+R +A D++GYGD+ +P + Y + L ++V +D LG+ Q + HDW ++ W LF P+R++A L+ PFMP +P V P+ +R++ +Y + FQEPG E + N+ K+ + I + + + L ++E++ +Y +F KTG G LN+YRN NW+ + G ++ VP +T + DIV +K+ ++ +PFL+ + E H+ E +V+ + +++ Sbjct: 235 VSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQL-YFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLRPEMSKN------MEKWIPFLKRGHI-EDCGHWTQIEKPTEVNQILIKWLQT 543
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: HYES_PIG (Bifunctional epoxide hydrolase 2 OS=Sus scrofa OX=9823 GN=EPHX2 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.504e-44 Identity = 94/262 (35.88%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 37 GIKMHVAEKGEGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKMETLYDNNIEEAIKN--------MLTSRRPGPPILPKEGAGSNXXXXXXXXXXXXXXXXXQEDLTYYASKFGKTXXXXXXXXXXXXXXXWELTAAWTGVQVKVPVKFITGDLDIV 798 G+++H E G GP V HGFPE W+SWR+QI AL+ G+R +A D++GYG++ AP + Y++ L D+V ++ LG+ Q + HDWG ++ W LF P+R++A L+ PFMP NP V P++ ++A DY + FQEPG E + N++ KN LT+ R +E G L G+ L +++ED+ +Y +F K+G G LN+YRN+ NW+ +G ++ +P +T + D+V Sbjct: 247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQL-YFQEPGVAEAELEQNLDRTFKNFFRAHDETFLTTNR------VRELGG---LFVGTPEEPSLSRLVTEEDIQFYVQQFKKSGFRGPLNWYRNMERNWQWGCKGSGRKILIPALMVTAENDLV 498
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: HYES_HUMAN (Bifunctional epoxide hydrolase 2 OS=Homo sapiens OX=9606 GN=EPHX2 PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 3.167e-43 Identity = 90/255 (35.29%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 40 IKMHVAEKGEGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKMETLYDNNIEEAIKNMLTSRRPGPPILPK--EGAGSNXXXXXXXXXXXXXXXXXQEDLTYYASKFGKTXXXXXXXXXXXXXXXWELTAAWTGVQVKVPVKFITGDLDIV 798 +++H E G GP V HGFPE WYSWR+QI AL+ GYR +A D++GYG++ AP + Y + L ++V +D LG+ Q + HDWG ++ WY LF P+R++A L+ PF+P NP + P+++++A DY + FQEPG E + N+ K++ + + K E G L S L +++E++ +Y +F K+G G LN+YRN+ NW+ G ++ +P +T + D V Sbjct: 248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL-YFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGG---LFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFV 498
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: EPHB_MYCTU (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephB PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.890e-32 Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 16 HRTVEVNGIKMHVAEKG----EGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKM 480 HR + G ++H +GP+V+ LHGFPE WYSWRHQI AL+ GYR VA D RGYG + +Y I LV DVV ++DS G +Q F+V HDWGA V W PDR V +SVPF R P DY++ PG++ Sbjct: 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHL-ELAGPGRV 162
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: EPHB_MYCTO (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1988 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.890e-32 Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 16 HRTVEVNGIKMHVAEKG----EGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKM 480 HR + G ++H +GP+V+ LHGFPE WYSWRHQI AL+ GYR VA D RGYG + +Y I LV DVV ++DS G +Q F+V HDWGA V W PDR V +SVPF R P DY++ PG++ Sbjct: 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHL-ELAGPGRV 162
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: YFHM_BACSU (AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) OX=224308 GN=yfhM PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.915e-32 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 1 MEGVEHRTVEVNGIKMHVAEKG--EGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKME-TLYDNNIEEAIKNMLTSRRPG 546 M+GV+ + V NGI +HVA G +GP+++ LHGFPE WY W++QI L GYR +APD RGY +D P + SY I L D++ LI ++ ++ HDWG V W+ RP+ ++ + +++P V P+ + L YI FQ P E +L +N+ + K + S RP Sbjct: 1 MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSS--YIAYFQLPDIPEASLRENDYDTLDKAIGLSDRPA 183
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus OX=10090 GN=Ephx4 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 8.224e-31 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 25 VEVNGIKMHVAEKGE--GPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMPRNPKVKPVDAMR---ALYGDDYYICRFQEPGKMETLYDNNIEEAIKNMLTSRRPG 546 ++ +G++ H GE P++L LHGFPE WYSWRHQ+ + YR VA DLRGYG++DAPA SY + L+AD+ ++DSLG + L+ HDWG ++ W + P+ I + ++ P +P V +R L+ +Y FQ P E ++ N +A+K++ TS+ G Sbjct: 74 IKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKS-EYRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFP----HPSVFTEYILRHPAQLFRSSFYYF-FQIPRFPEFMFSINDFKALKHLFTSQSTG 246
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens OX=9606 GN=EPHX3 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.648e-28 Identity = 68/187 (36.36%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 22 TVEVNGIKMHV--AEKGEGPVVLFLHGFPELWYSWRHQILALSALGYRAVAPDLRGYGDTDAPASVSSYTILHLVADVVALIDSLGVDQVFLVAHDWGALVGWYTCLFRPDRIKAYVCLSVPFMP--RNPKVKPVDAMRALYGDDYYICRFQEPGKMETLYDNNIEEAIKNMLTSRRPGPPIL-PKE 567 ++ +G+++H A +G GP++LFLHGFPE W+SWR+Q+ + + VA DLRGYG +DAP V YTI L+ D+ +I LG + LVAHDWGAL+ W+ ++ P ++ V +S M ++ + + + +Y+ FQ P E L + + +K LT R+ G P L P E Sbjct: 79 NLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQS-RFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHISQ----FFRSHYMFLFQLPWLPEKLLSMSDFQILKTTLTHRKTGIPCLTPSE 260 The following BLAST results are available for this feature:
BLAST of Phvul.006G088500.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.006G088500.1_Pv_G19833_v2.1 >Phvul.006G088500.1_Pv_G19833_v2.1 ID=Phvul.006G088500.1_Pv_G19833_v2.1; Name=Phvul.006G088500.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=321bpback to top mRNA from alignment at Chr06:20029131..20031048+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.006G088500.1_Pv_G19833_v2.1 ID=Phvul.006G088500.1_Pv_G19833_v2.1; Name=Phvul.006G088500.1; organism=Phaseolus vulgaris; type=mRNA; length=1918bp; location=Sequence derived from: Chr06:20029131..20031048+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr06:20029131..20031048+ >Phvul.006G088500.1_Pv_G19833_v2.1 ID=Phvul.006G088500.1_Pv_G19833_v2.1; Name=Phvul.006G088500.1; organism=Phaseolus vulgaris; type=CDS; length=963bp; location=Sequence derived from: Chr06:20029131..20031048+ (Phaseolus vulgarisback to top |