Phvul.006G089500.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAPZA_ARATH (F-actin-capping protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At3g05520 PE=2 SV=2) HSP 1 Score: 442.195 bits (1136), Expect = 2.017e-156 Identity = 197/292 (67.47%), Postives = 249/292 (85.27%), Query Frame = 1 Query: 40 HKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDISKELGIGK 915
K EIAKWF LN+P GEI YVAKD+K++LS +++YNEAA EAFP YNK+H+I L+M + +GDV+V+S+ E+ N +L+PRTAQVAIVDHVKQ+CT VRPA DEELP+ Y+EE+R LDAE+ +YV E+YPKG+ +V C+ GKD EGPGS+FEL V+I+A R SPQNFCNGSW SVWNI+F+ + Q +++KGK QVGAHYFEEGNV+LDAK + +D+T+FQ+ ++CA+AI +IIRHHETEYLASLE +Y LPD+TFKDLRRKLPVTRTLFPW NTLQFSLTR++ KELG+GK
Sbjct: 17 QKKEIAKWFFLNAPAGEINYVAKDLKAVLSDEEVYNEAAMEAFPVYNKTHMICLEMPSGAGDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEYRYALDAEIQRYVSESYPKGMSAVNCVKGKDNEGPGSDFELVVIITAMRLSPQNFCNGSWRSVWNIDFQDESQVLDIKGKLQVGAHYFEEGNVELDAKKDFQDSTIFQSADDCAIAIANIIRHHETEYLASLEVAYSKLPDNTFKDLRRKLPVTRTLFPWQNTLQFSLTREVEKELGLGK 308
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAPZA_DICDI (F-actin-capping protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=acpB PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 6.849e-55 Identity = 105/289 (36.33%), Postives = 149/289 (51.56%), Query Frame = 1 Query: 31 SDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDISK 897
S++ V+IA FLLN+PP E V DV+++L S+ L N +A F YN S ++S+Q S G L+T GE+ N +L+P+ QV DH+KQ T R A+ E +E++R D E KY E YP GV +VY K EG ++ V IS + P F +G W SVW FK V GK QV HYFE+GNVQL+ + + + + A+ I E +L+ +Y + D+TFK LRR LP+ RT W F + +++K
Sbjct: 3 SNQELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTS--KGSALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGE--IEQDIEQYRAAFDEEATKYCNEYYPNGVSAVYGT--KVSEG----IKITVCISTCIYKPNAFYSGRWRSVWTCTFKPGSGNVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALDNNYSTMGDTTFKALRRALPINRTKINWQKVKNFKIANELNK 281
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAPZA_DROME (F-actin-capping protein subunit alpha OS=Drosophila melanogaster OX=7227 GN=cpa PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.253e-54 Identity = 92/291 (31.62%), Postives = 154/291 (52.92%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDISKE 900
++D KV I F+L++PPGE V DV+ +L +D L + AS AF YNK L +++ + +++ +L F +PRT Q DH+++ +D + + P+ R LD E L Y Y GV SV+ GK G+ L + I + P+N+ NG W S W++ F+ T E+KG +V HY+E+GNVQL + EC+++ + ++ A + +I E EY ++ +Y + D+TFK +RR+LP+TRT W + +S+ +++ +
Sbjct: 6 ITDAEKVRIVSDFILHAPPGEFNEVFNDVRELLKNDTLLKDGASHAFAQYNKDQLTPVRIEGTDHNAIISEHNDLGNGRFYDPRTKQAFKYDHLRKEASDYQDVEADATAEPW----RAALDLETLAYTASHYRHGVSSVF---GK---AQGNQITLTICIEDHQFQPKNYWNGRWRSQWHVTFQAGSGTAELKGVLKVQVHYYEDGNVQLVSSKECRESVVVSNEQQVAKEVIRLIEDAENEYQLAISENYQTMSDTTFKAMRRQLPITRTKIDWSKIVSYSIGKELKTQ 286
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_OTOGA (F-actin-capping protein subunit alpha-2 OS=Otolemur garnettii OX=30611 GN=CAPZA2 PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.170e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E VE +R +++ + YV+E YP GVC+VY GK ++G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----VESWRTSVETALRAYVKEHYPNGVCTVY---GKKIDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAREFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_RAT (F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.331e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E +E +R +++ + YV+E YP GVC+VY GK V+G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----IESWRTSVETALRAYVKEHYPNGVCTVY---GKKVDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTVTPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_MUSPF (F-actin-capping protein subunit alpha-2 OS=Mustela putorius furo OX=9669 GN=CAPZA2 PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.331e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E VE +R +++ + YV+E YP GVC+VY GK ++G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----VESWRTSVETALRAYVKEHYPNGVCTVY---GKKIDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_MOUSE (F-actin-capping protein subunit alpha-2 OS=Mus musculus OX=10090 GN=Capza2 PE=1 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.331e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E +E +R +++ + YV+E YP GVC+VY GK V+G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----IESWRTSVETALRAYVKEHYPNGVCTVY---GKKVDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTVTPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_PIG (F-actin-capping protein subunit alpha-2 OS=Sus scrofa OX=9823 GN=CAPZA2 PE=2 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.345e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E VE +R +++ + YV+E YP GVC+VY GK ++G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----VESWRTSVETALRAYVKEHYPNGVCTVY---GKKIDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_NEONE (F-actin-capping protein subunit alpha-2 OS=Neofelis nebulosa OX=61452 GN=CAPZA2 PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.345e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E VE +R +++ + YV+E YP GVC+VY GK ++G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----VESWRTSVETALRAYVKEHYPNGVCTVY---GKKIDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Match: CAZA2_FELCA (F-actin-capping protein subunit alpha-2 OS=Felis catus OX=9685 GN=CAPZA2 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.345e-49 Identity = 97/288 (33.68%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 28 LSDKHKVEIAKWFLLNSPPGEIQYVAKDVKSILSSDDLYNEAASEAFPFYNKSHLISLQMSNRSGDVLVTSFGELEGNAFLEPRTAQVAIVDHVKQVCTDVRPATDEELPTPYVEEFRCNLDAEVLKYVEEAYPKGVCSVYCINGKDVEGPGSNFELAVVISAARHSPQNFCNGSWSSVWNIEFKYDQQTVEVKGKTQVGAHYFEEGNVQLDAKHECKDATLFQAPEECALAITSIIRHHETEYLASLEASYLNLPDSTFKDLRRKLPVTRTLFPWHNTLQFSLTRDI 891
LSD+ KV IA F++++PPGE V DV+ +L++D+L E A+ AF YN +++ VL+T G+L FL+P+ DH+++ TD RP E VE +R +++ + YV+E YP GVC+VY GK ++G + + I + + +NF NG W S W +F T +V G ++ HY+E+GNVQL + + +D+ + A I+ E EY ++ +Y + D+TFK LRR+LPVTRT W+ L + + +++
Sbjct: 8 LSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPYEAENA----VESWRTSVETALRAYVKEHYPNGVCTVY---GKKIDGQQT---IIACIESHQFQAKNFWNGRWRSEW--KFTITPSTTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEM 283 The following BLAST results are available for this feature:
BLAST of Phvul.006G089500.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.006G089500.1_Pv_G19833_v2.1 >Phvul.006G089500.1_Pv_G19833_v2.1 ID=Phvul.006G089500.1_Pv_G19833_v2.1; Name=Phvul.006G089500.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=306bpback to top mRNA from alignment at Chr06:20106331..20109935- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.006G089500.1_Pv_G19833_v2.1 ID=Phvul.006G089500.1_Pv_G19833_v2.1; Name=Phvul.006G089500.1; organism=Phaseolus vulgaris; type=mRNA; length=3605bp; location=Sequence derived from: Chr06:20106331..20109935- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr06:20106331..20109935- >Phvul.006G089500.1_Pv_G19833_v2.1 ID=Phvul.006G089500.1_Pv_G19833_v2.1; Name=Phvul.006G089500.1; organism=Phaseolus vulgaris; type=CDS; length=918bp; location=Sequence derived from: Chr06:20106331..20109935- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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