Phvul.006G106100.1

Transcript Overview
NamePhvul.006G106100.1
Unique NamePhvul.006G106100.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:21554450..21555061 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pspvL231Pisum sativum Cameor genome v1aPisum sativum
pspvL233Pisum sativum Cameor genome v1aPisum sativum
pspvL631Pisum sativum Cameor genome v1aPisum sativum
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR554Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0291Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0430Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL276Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL390Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL235Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL360Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0730Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0739Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0910Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0491Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0781Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0961Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1308Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL314Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR510Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR532Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR572Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR582Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR563Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR573Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR523Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR649Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL403Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL225Cicer arietinum
carpvL338Cicer arietinum
ccapvL290Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL381Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR581Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR585Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR617Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR583Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR631Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR620Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR640Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR627Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR640Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR509Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR511Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr07.1238Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_08472.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_007214Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_04074.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_011113Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun07g159200.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan10g157600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun07g159200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va09G048430.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun06g117000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.05G106500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr06.1272Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun06g117000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr06.1001427Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G106100Phvul.006G106100_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G106100.1Phvul.006G106100.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G106100.1_Pv_G19833_v2.1Phvul.006G106100.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G106100.1.v2.1.CDS.1Phvul.006G106100.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


Homology
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.140e-42
Identity = 94/187 (50.27%), Postives = 128/187 (68.45%), Query Frame = 1
Query:   37 LPFNENDSQEMPLYQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKMEYGFDQGSSPVLELKKRHSINRKWERKKLKKNVQXXXXXXXXXGVSQHVMVLEDLGTEYLEHLLTLSQD 597
            LPFNENDS+EM LY ++ Q+   +     S    +   S+    ++   YRGVRRRPWGK+AAEIRDSTRNG+RVWLGTF++AE AALAYDQAAF+MRGS A+LNF AE V +SL +++Y ++ G SPV+ LK++HS+ R+   KK K +  +    +       +V+V EDLG +YLE LL  S++
Sbjct:   36 LPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRKSEKS---YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKL-----DNVVVFEDLGEQYLEELLGSSEN 214          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.358e-31
Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKME-YGFDQGSSPVLELKKRHSI-NRKWERKK------------------------LKKNVQXXXXXXXXXGVSQHVMVLEDLGTEYLEHLL 582
            YRGVR+RPWGK+AAEIRDSTR G+RVWLGTFDTAEAAALAYDQAAFA++GS AVLNFPA++V +SLRKME    + G SPV+ LK++HS+ NR   +KK                           +   ++     +  +  ++VLEDLG EYLE L+
Sbjct:   82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEELM 240          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.052e-30
Identity = 80/157 (50.96%), Postives = 96/157 (61.15%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKME-YGFDQGSSPVLELKKRHSI-NRKWERKKLKKNVQXXXXXXXXXGV-------------------SQHVMVLEDLGTEYLEHLLTLS 591
            YRGVR+RPWGK+AAEIRDSTRNG+RVWLGTFD AE AALAYDQAAFA +GS A LNFP E+V +SL+KME      G SPV+ LK++HS+ NR   +K+   +                                S  ++V EDLG EYLE LL  S
Sbjct:   86 YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.105e-27
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1
Query:   28 QYSLPFNENDSQEMPLYQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSL 381
            Q  LP NENDSQEM LY+VL +A A++   +      +   + +   +     YRGVRRRPWGKYAAEIRDS R+G RVWLGTF+TAE AALAYD+AAF MRG+KA+LNFP+EIV  S+
Sbjct:    6 QSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIGKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASV 124          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.728e-20
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363
            YRGVRRRPWGKYAAEIRD  + GVRVWLGTFDTA  AA  YD+AAF +RGSKA+LNFP E
Sbjct:   72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.792e-19
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363
            YRGVRRRPWGKYAAEIRDS ++G RVWLGTFDTAE AA AYDQAA++MRG  A+LNFP E
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHE 74          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.695e-19
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363
            YRGVRRRPWGKYAAEIRDS ++G RVWLGTFDTAE AA AYD+AA++MRG  A+LNFP E
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.890e-19
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363
            YRGVR+RPWGKYAAEIRDS R+G RVWLGTF+TAE AA AYD+AAF MRG +A+LNFP E
Sbjct:   14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.251e-18
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIV 369
            YRGVR+RPWGK+AAEIRD  R G RVWLGTFDTA  AA AYD+AA+ +RGSKA++NFP E+ 
Sbjct:  138 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVA 199          
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.264e-18
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 1
Query:  184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIV 369
            YRGVR+RPWGK+AAEIRD  R G RVWLGTFDTA  AA AYD+AAF +RGSKA++NFP E+ 
Sbjct:  145 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVA 206          
The following BLAST results are available for this feature:
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ERF92_ARATH2.140e-4250.27Ethylene-responsive transcription factor 1B OS=Ara... [more]
ERF94_ARATH1.358e-3151.57Ethylene-responsive transcription factor ERF094 OS... [more]
ERF93_ARATH1.052e-3050.96Ethylene-responsive transcription factor 15 OS=Ara... [more]
PTI5_SOLLC4.105e-2758.82Pathogenesis-related genes transcriptional activat... [more]
EF105_ARATH4.728e-2078.33Ethylene-responsive transcription factor ERF105 OS... [more]
ERF96_ARATH2.792e-1980.00Ethylene-responsive transcription factor ERF096 OS... [more]
ERF97_ARATH4.695e-1978.33Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF95_ARATH5.890e-1978.33Ethylene-responsive transcription factor ERF095 OS... [more]
ERF5_NICSY1.251e-1870.97Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_TOBAC1.264e-1872.58Ethylene-responsive transcription factor 5 OS=Nico... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..176
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 62..73
score: 71.67
coord: 85..101
score: 70.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 61..125
e-value: 7.3E-37
score: 138.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 61..111
e-value: 4.9E-14
score: 52.3
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 61..119
score: 23.591
IPR001471AP2/ERF domainCDDcd00018AP2coord: 62..120
e-value: 1.9059E-22
score: 83.8603
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 61..122
e-value: 7.1E-32
score: 111.0
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 62..121

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G106100.1_Pv_G19833_v2.1

>Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=204bp
MTSSLTCQTQYSLPFNENDSQEMPLYQVLAQAAAISSETITSSLSSVSHA
STVAEAEASVSYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTAEAAAL
AYDQAAFAMRGSKAVLNFPAEIVWQSLRKMEYGFDQGSSPVLELKKRHSI
NRKWERKKLKKNVQEEEEEEEEEGVSQHVMVLEDLGTEYLEHLLTLSQDM
NVS*
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mRNA from alignment at Chr06:21554450..21555061-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1; organism=Phaseolus vulgaris; type=mRNA; length=612bp; location=Sequence derived from: Chr06:21554450..21555061- (Phaseolus vulgaris
ATGACTTCCTCACTCACGTGTCAGACCCAATACTCCCTTCCTTTCAACGA AAATGACTCTCAAGAAATGCCCCTTTACCAAGTTCTGGCTCAGGCTGCTG CAATTTCCTCGGAAACAATAACATCATCGTTATCTTCGGTGTCCCATGCT TCAACTGTTGCCGAAGCAGAAGCTTCGGTTTCGTACAGAGGGGTTCGGAG GAGGCCATGGGGGAAGTACGCGGCAGAGATAAGGGACTCCACGAGGAACG GAGTGAGGGTTTGGTTGGGAACCTTCGACACTGCCGAGGCTGCTGCTCTG GCTTACGACCAGGCTGCTTTCGCCATGCGAGGCTCCAAGGCAGTGCTCAA CTTCCCAGCTGAGATTGTTTGGCAATCGCTTCGGAAGATGGAGTATGGTT TTGACCAAGGGTCTTCCCCCGTTCTGGAGTTGAAAAAGAGACACTCCATA AATAGAAAATGGGAGAGGAAGAAGCTGAAGAAGAATGTGCAGGAAGAAGA AGAAGAAGAAGAAGAAGAAGGTGTTTCGCAACATGTGATGGTGTTGGAGG ACTTAGGCACAGAGTATTTGGAACATCTTCTTACTCTCTCCCAGGATATG AATGTTTCTTAG
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Coding sequence (CDS) from alignment at Chr06:21554450..21555061-

>Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1; organism=Phaseolus vulgaris; type=CDS; length=612bp; location=Sequence derived from: Chr06:21554450..21555061- (Phaseolus vulgaris
ATGACTTCCTCACTCACGTGTCAGACCCAATACTCCCTTCCTTTCAACGA
AAATGACTCTCAAGAAATGCCCCTTTACCAAGTTCTGGCTCAGGCTGCTG
CAATTTCCTCGGAAACAATAACATCATCGTTATCTTCGGTGTCCCATGCT
TCAACTGTTGCCGAAGCAGAAGCTTCGGTTTCGTACAGAGGGGTTCGGAG
GAGGCCATGGGGGAAGTACGCGGCAGAGATAAGGGACTCCACGAGGAACG
GAGTGAGGGTTTGGTTGGGAACCTTCGACACTGCCGAGGCTGCTGCTCTG
GCTTACGACCAGGCTGCTTTCGCCATGCGAGGCTCCAAGGCAGTGCTCAA
CTTCCCAGCTGAGATTGTTTGGCAATCGCTTCGGAAGATGGAGTATGGTT
TTGACCAAGGGTCTTCCCCCGTTCTGGAGTTGAAAAAGAGACACTCCATA
AATAGAAAATGGGAGAGGAAGAAGCTGAAGAAGAATGTGCAGGAAGAAGA
AGAAGAAGAAGAAGAAGAAGGTGTTTCGCAACATGTGATGGTGTTGGAGG
ACTTAGGCACAGAGTATTTGGAACATCTTCTTACTCTCTCCCAGGATATG
AATGTTTCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription