Phvul.006G106100.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.140e-42 Identity = 94/187 (50.27%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 37 LPFNENDSQEMPLYQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKMEYGFDQGSSPVLELKKRHSINRKWERKKLKKNVQXXXXXXXXXGVSQHVMVLEDLGTEYLEHLLTLSQD 597 LPFNENDS+EM LY ++ Q+ + S + S+ ++ YRGVRRRPWGK+AAEIRDSTRNG+RVWLGTF++AE AALAYDQAAF+MRGS A+LNF AE V +SL +++Y ++ G SPV+ LK++HS+ R+ KK K + + + +V+V EDLG +YLE LL S++ Sbjct: 36 LPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRKSEKS---YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKL-----DNVVVFEDLGEQYLEELLGSSEN 214
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.358e-31 Identity = 82/159 (51.57%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKME-YGFDQGSSPVLELKKRHSI-NRKWERKK------------------------LKKNVQXXXXXXXXXGVSQHVMVLEDLGTEYLEHLL 582 YRGVR+RPWGK+AAEIRDSTR G+RVWLGTFDTAEAAALAYDQAAFA++GS AVLNFPA++V +SLRKME + G SPV+ LK++HS+ NR +KK + ++ + + ++VLEDLG EYLE L+ Sbjct: 82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEELM 240
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.052e-30 Identity = 80/157 (50.96%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSLRKME-YGFDQGSSPVLELKKRHSI-NRKWERKKLKKNVQXXXXXXXXXGV-------------------SQHVMVLEDLGTEYLEHLLTLS 591 YRGVR+RPWGK+AAEIRDSTRNG+RVWLGTFD AE AALAYDQAAFA +GS A LNFP E+V +SL+KME G SPV+ LK++HS+ NR +K+ + S ++V EDLG EYLE LL S Sbjct: 86 YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.105e-27 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 28 QYSLPFNENDSQEMPLYQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIVWQSL 381 Q LP NENDSQEM LY+VL +A A++ + + + + + YRGVRRRPWGKYAAEIRDS R+G RVWLGTF+TAE AALAYD+AAF MRG+KA+LNFP+EIV S+ Sbjct: 6 QSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIGKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASV 124
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.728e-20 Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363 YRGVRRRPWGKYAAEIRD + GVRVWLGTFDTA AA YD+AAF +RGSKA+LNFP E Sbjct: 72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.792e-19 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363 YRGVRRRPWGKYAAEIRDS ++G RVWLGTFDTAE AA AYDQAA++MRG A+LNFP E Sbjct: 15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHE 74
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.695e-19 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363 YRGVRRRPWGKYAAEIRDS ++G RVWLGTFDTAE AA AYD+AA++MRG A+LNFP E Sbjct: 20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.890e-19 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAE 363 YRGVR+RPWGKYAAEIRDS R+G RVWLGTF+TAE AA AYD+AAF MRG +A+LNFP E Sbjct: 14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.251e-18 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIV 369 YRGVR+RPWGK+AAEIRD R G RVWLGTFDTA AA AYD+AA+ +RGSKA++NFP E+ Sbjct: 138 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVA 199
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.264e-18 Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 184 YRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTXXXXXXXXXXXXXXMRGSKAVLNFPAEIV 369 YRGVR+RPWGK+AAEIRD R G RVWLGTFDTA AA AYD+AAF +RGSKA++NFP E+ Sbjct: 145 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVA 206 The following BLAST results are available for this feature:
BLAST of Phvul.006G106100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.006G106100.1_Pv_G19833_v2.1 >Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=204bpback to top mRNA from alignment at Chr06:21554450..21555061- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1; organism=Phaseolus vulgaris; type=mRNA; length=612bp; location=Sequence derived from: Chr06:21554450..21555061- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr06:21554450..21555061- >Phvul.006G106100.1_Pv_G19833_v2.1 ID=Phvul.006G106100.1_Pv_G19833_v2.1; Name=Phvul.006G106100.1; organism=Phaseolus vulgaris; type=CDS; length=612bp; location=Sequence derived from: Chr06:21554450..21555061- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|