Phvul.006G175300.1

Transcript Overview
NamePhvul.006G175300.1
Unique NamePhvul.006G175300.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:27814996..27819558 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL160Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL246Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL069Pisum sativum Cameor genome v1aPisum sativum
pspvL072Pisum sativum Cameor genome v1aPisum sativum
pspvL836Pisum sativum Cameor genome v1aPisum sativum
pvvuR518Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR521Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR531Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0089Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL085Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL075Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caipvL0838Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL882Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL624Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0818Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0069Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0070Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0283Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0493Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0957Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1233Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL079Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL214Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL727Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR493Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR532Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR482Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR462Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR607Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR643Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL072Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL606Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL609Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL317Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL693Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL072Cicer arietinum
carpvL606Cicer arietinum
carpvL608Cicer arietinum
ccapvL141Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL490Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL782Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL840Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR571Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR618Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR628Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR631Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR581Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR579Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR584Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR621Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR632Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR635Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR628Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR632Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR636Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR484Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR490Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR499Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR480Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR483Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR492Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_004504238.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014661971.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cc_v2.0_19780.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun03g098200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_05G00441.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr06.1939Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_20360Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.07G081000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00852.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun06g190200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun06g190200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan09g233400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_027854Cajanus cajan Asha genome v1.0Cajanus cajan
jg28932.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr03.171Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.05G043600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va09G059020.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.07G106500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_24081.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun03g098200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_02989Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun05g207800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.01G087900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_17798Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.05G053900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va05G041930.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.652Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr06.2005Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.005G094600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G175300Phvul.006G175300_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G175300.1Phvul.006G175300.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G175300.1_Pv_G19833_v2.1Phvul.006G175300.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G175300.1.v2.1.five_prime_UTR.1Phvul.006G175300.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.006G175300.1.v2.1.five_prime_UTR.2Phvul.006G175300.1.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G175300.1.v2.1.CDS.1Phvul.006G175300.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G175300.1.v2.1.CDS.2Phvul.006G175300.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G175300.1.v2.1.CDS.3Phvul.006G175300.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G175300.1.v2.1.CDS.4Phvul.006G175300.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G175300.1.v2.1.CDS.5Phvul.006G175300.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G175300.1.v2.1.CDS.6Phvul.006G175300.1.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G175300.1.v2.1.three_prime_UTR.1Phvul.006G175300.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.405e-27
Identity = 49/73 (67.12%), Postives = 63/73 (86.30%), Query Frame = 1 
Query:  232 GTVRQYVRSKMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKKLDEVGQ 450
            G VR YVRS +PRLRWTPELH SF+HAV+ LGGQ +ATPKLVL++M+V+GL+I+HVKSHLQMYR  ++  +G+
Sbjct:   13 GGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLGK 85
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.321e-19
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:  259 KMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKKLDEVG 447
            + PR+RWT  LH  F+HAV+ LGG ERATPK VL+LMNV+ L++AHVKSHLQMYR+ K  + G
Sbjct:  104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDKG 166
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.478e-19
Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 1 
Query:  229 RGTVRQYVRSKMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKKLDE 441
            R T ++ VR+  PR+RWT  LH  F+HAV+ LGG ERATPK VL+LM+V+ L++AHVKSHLQMYR+ K  E
Sbjct:  155 RFTAKRGVRA--PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKSTE 223
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: PHR1_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 GN=PHR1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.079e-18
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:  268 RLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            R+RWTPELH SF+HAV +LGG E+ATPK VL+LM V+GL+I HVKSHLQ YR+ +
Sbjct:  218 RMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTAR 272
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: PHR1_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.089e-18
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:  268 RLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            R+RWTPELH SF+HAV +LGG E+ATPK VL+LM V+GL+I HVKSHLQ YR+ +
Sbjct:  218 RMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTAR 272
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.167e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1 
Query:  259 KMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKKLDEVGQVLSQRSN 471
            + PR+RWT  LH  F+HAVE LGG ERATPK VL+LM+V+ L++AHVKSHLQMYR+ K  +     S +S+
Sbjct:  212 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSD 282
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.676e-18
Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:  259 KMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            + PR+RWT  LH  F+HAVE LGG ERATPK VL+LM+V+ L++AHVKSHLQMYR+ K
Sbjct:  218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.111e-17
Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:  259 KMPRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            + PR+RWT  LH  F+HAVE LGG ERATPK VL+LM+V+ L++AHVKSHLQMYR+ K
Sbjct:  323 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 380
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: PHR1_ARATH (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=PHR1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.963e-17
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1 
Query:  268 RLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            R+RWTPELH +F+ AV  LGG ERATPK VL++M VEGL+I HVKSHLQ YR+ +
Sbjct:  227 RMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTAR 281
[Close]
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Match: PHR3_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.389e-17
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:  265 PRLRWTPELHHSFMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKK 432
            PRLRWTPELH  F+ AV +L G E+ATPK VL+LM VEGL+I H+KSHLQ YR  K
Sbjct:  266 PRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKSHLQKYRLAK 321
The following BLAST results are available for this feature:
BLAST of Phvul.006G175300.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
MYBF_ARATH1.405e-2767.12Putative Myb family transcription factor At1g14600... [more]
KAN4_ARATH3.321e-1963.49Probable transcription factor KAN4 OS=Arabidopsis ... [more]
KAN3_ARATH7.478e-1960.56Probable transcription factor KAN3 OS=Arabidopsis ... [more]
PHR1_ORYSI1.079e-1869.09Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza s... [more]
PHR1_ORYSJ1.089e-1869.09Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza s... [more]
KAN2_ARATH3.167e-1857.75Probable transcription factor KAN2 OS=Arabidopsis ... [more]
KAN1_ARATH6.676e-1867.24Transcription repressor KAN1 OS=Arabidopsis thalia... [more]
ROLL9_ORYSJ1.111e-1767.24Probable transcription factor RL9 OS=Oryza sativa ... [more]
PHR1_ARATH2.963e-1767.27Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabido... [more]
PHR3_ORYSJ6.389e-1767.86Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza s... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 85..145
e-value: 1.7E-25
score: 90.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..46
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 91..141
e-value: 3.1E-7
score: 30.5
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 89..144
e-value: 1.4E-22
score: 77.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 85..145
score: 12.219
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 87..143

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G175300.1_Pv_G19833_v2.1

>Phvul.006G175300.1_Pv_G19833_v2.1 ID=Phvul.006G175300.1_Pv_G19833_v2.1; Name=Phvul.006G175300.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=365bp
MSEGHEIHSNEEASSGCSQKCSSFDLNTEACSDDNTNGSTEEGYELTTDE
NNIEKVKDEGTSANNGSSISREGNERRGTVRQYVRSKMPRLRWTPELHHS
FMHAVERLGGQERATPKLVLQLMNVEGLSIAHVKSHLQMYRSKKLDEVGQ
VLSQRSNQRVRSVMLHQSMSPQQHLKMGNGGIILATQFDKHCHFPSLMQT
PFPLSRSHANDTNSRHQQWYINHQHFRKPIASGQIQPKDTPTRPSQLLDE
KRWLPLEIINNHQSKFQKLPAIVAPKTGSHAVQPTEWSFVNNTSVTEYIS
NKPNEPRNYSSSLKLEFDPPFRIKKDEQQLPDLQLSLSYTVASDGGKMNH
YRETQEISTKLSLS*
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mRNA from alignment at Chr06:27814996..27819558+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G175300.1_Pv_G19833_v2.1 ID=Phvul.006G175300.1_Pv_G19833_v2.1; Name=Phvul.006G175300.1; organism=Phaseolus vulgaris; type=mRNA; length=4563bp; location=Sequence derived from: Chr06:27814996..27819558+ (Phaseolus vulgaris
GAACAAGTAGCCTGTCCGAATTATGTTATTCTCAATATTTTCATTTTTCT
TTTGGAAACCAATTAGTCTTTCTACCATCTTCAACTTGTTCAGTCTTAAT
TAATTATGCTGTTGAATCAATGATTTTTCACAAAGAACCAGGCATCAATT
TTCATCCCCTTAATTTCTCCTATCCCTTTCTTTCACACCCTCCACCCATA
AAAGAACAGCATATGATCCAGGACTCCACTTCAATCCTTTCAAGAAACAT
TCCTTTAGTCTATCTGGGCGATGGAGCTTTCTAGAGATAACTGGTTTGAA
GATATGTTTGGATATACAGTTGCACATAACACGTGATCTATAGACTTGGG
AGAGAAAGATATCATCATCTTCTTAGATGGTTAGTATTACTATTTAGGGG
AGAAAAATAGGATAAACACCTAAACATCATATATTTTTGCTATGCTTTTG
GTTATATTTGTTTCTTTGTCCTTTTAGCAGCCAATTAATGATTTAATCTA
TAAATTCTTACCACTTTCTTTCCCATCTTCCTTAAGGGGTATTCTTAGGA
TTTCTTTTTCTTTTCTTACCATAGCTCATGTCTTCCTGTCGCTGCAGCTT
GTTGAAGATTTCATAATCACTTCCCAACTTCTGTCCCAAAGATAATTTTT
CATTTTCTTTTCCTTATGCTGCATTTTTATCTAATCATGCAAGATACGTT
TTGTGTATGATGAGTCAGACTGTACTTTGAAAATCTCTGATCTCCTCATC
ATTTGTGTGATCATATATCTCTTGCTACTATATGTTGTGTGTGTTGGACA
CCTTGTTCTCATCCAGACTGTCCATTTCACATAAAGTGTTGTATTGGTTT
ACGAACTTGCTATTTTTCAAATTATCTGAATCCTTTTTTCTGTATGCCAG
GAACCTATTGGATGGAACCTGGTGTTATAGTGGTTAAATGAAAATCACTT
CTCATTGAGTTTATTGACTTAAGAAGTTAAACGAGACCTAAACGAATTCA
TATCTACCCCCACAATTTTCACCTGTCTTGTTGTTCGGATTTCTTCTTCA
ATCTTAATTTAATTTCTTACCCCTTTCTACACGAGTCTTGAGTATTCCAT
AACTTATGAATTTGTGATTTACATACAAAAGGTACTTATAAGGTAAAATT
CTTTAAGCATTCATTAGATCATTTTTTCACCTCTTCTGCGGTAGAGAAGT
TTGGTTGCATTATTTACTGAAGTCCTGATTTTCGAACTACTTCTATTTAT
TCAGCAGTAAATTATTTACATATGCATACACATGTGTATATAATATTTGT
AAGTAATGGGGATCCATCCAGTATAATAAATGTTTTTTTGCCATAAATTT
TCACTGCAGTTACTTTACCATCAATTCATAGCATTTCCGTGCAGTTACTT
GAACAGATTTAAAGCATAGTAATTGTTGTTGAGAAATTACAGCCTGTCCT
CACAAGGCTTACACATTCTTGTTCACGTTACTTTAATATGCTGCACATTA
AAACATTATTTCCTGTTTGTTTCAGACCTGAAATTCCAACTTTGTAAAGG
ACCAAAAAAGTCGAGTTGGTTGGAGGCAAAAACCCGTGCAACAACAAGTA
AACATGTCAGAAGGACATGAGATTCATAGCAATGAGGAAGCTTCATCGGG
ATGTTCCCAGAAATGCTCTTCATTTGACTTGAATACTGAAGCTTGCAGTG
ACGATAACACCAACGGTAGTACAGAAGAGGGCTATGAGCTCACAACCGAC
GAGAATAATATTGAGAAAGTAAAGGATGAGGGAACTTCAGCAAATAATGG
AAGTAGCATTTCAAGAGAAGGCAATGAGAGAAGAGGAACGGTGAGACAAT
ATGTTAGATCCAAGATGCCTCGGCTTCGGTGGACTCCTGAACTTCATCAT
TCATTTATGCATGCTGTTGAAAGACTTGGTGGACAAGAGAGTAAGTATTT
GTTAAGTTGTATATCTTCCAAAACATTACTACTTACATATTTAACCCAAA
GAGTTATACGAATTGTTATGTGAAATGAAACCTCTCTTATGAAAGAGTTA
ACACGTTTCGTTCAACTCTGCATATTACTTGGAGCAGGAGCAACACCCAA
GTTGGTGCTTCAGCTAATGAATGTGGAAGGACTTAGCATTGCTCACGTCA
AGAGCCACTTGCAGGTAGCACAAATTGAAGTTTGAGATAAATTCTCTTTT
TCCTTAAAGGTTTTTACAAGTATAAAATGTGCAGCTAATATCCTCAGTCA
ACACAAATGTCCATTCCAAATGATTGAGCAAGTATTTGAAAATGTTTATT
CAAGCCTATTTGATCATATCGGACAGTTCTTCTATAAACTATTTTTCTTT
ATTTTGATAAACTTTACCCTAGCGTTTGTTAAGATGAACTGTAAAAAACA
TCATAAGTTAAAATTACGAGTTACTTTCATAAGTTAAAATCACGAGTTAG
TTTTGTAAGCTTAGTTTATCAAAATAAAGTTACTAAATTAAATGTTTATG
TTTATTCAAACGCATCTTTAGTTGATGTATCTATAATCAATATTCAATTC
TCATTTCAGATGTATCGAAGCAAGAAACTTGACGAGGTTGGGCAAGGTAC
TACACTACTATACTAATTTCTAATAATTTGTAATGATAATGAGTTCATGA
AATAAGATTCTAATTTGATAAACTTAAACTGAACAAAGAATGTCGATGGG
GAGGGTAGGGTTTTTTCAATAACGAATCCTGAATTAATCAAAGTTCAAGG
TGATGTAGCTAGTAAGGATTTAGGGTTAGGGTTTGTTTATCTTGGTGAAA
CACATATGTTGAACCTTTGACAATTCATTTATATTTTGCAGTACTGAGTC
AAAGGTCGAACCAAAGGGTACGATCTGTGATGCTTCATCAGTCCATGAGT
CCTCAACAACATCTTAAGATGGGGAATGGTGGAATCATTCTGGCAACTCA
ATTCGACAAACATTGTCATTTCCCAAGTCTCATGCAGACCCCCTTCCCCC
TATCACGTTCCCATGCAAATGACACCAATTCAAGGTAACATACTTTTTAT
ATAACTTCATTTACATCTGGTTTGTTCAAATACCTACATTATAAAATATT
TTCATCTTTTTCTATCAATTATAATTTATACAAGTTGTTAATTTTTATGA
TAAAATATAATTGAATAACAATGCTGCATTACCCTTTTCTCACCAATTCT
TGTAAATTACTTCTTTCCTCTTAAATTATTACAATTTTACATTTTCTCCT
TCTCTACAAAGTTTGCTATTTCAAAAATTTATTATCTTTAGTTTAACTCT
TCTCTTCTATTAATATTCTCTCTTTCTTAACTATGATTAATTAATTAATA
TGGATATTTTAGTTATAATAATACATATTACTAGTTAACTATTTGTTAAT
TTATTTGCAATAACTTTAAACAACCATAGCTTTAAAATGGGGACCCTTTC
AATAAGTTACTATAAAAAGATGTGGTCAGATAATTACAGTTCAAGTTCAA
ATTCTTGGTCTTGTTTTCCACTGTCTTACAAAAAGAAAATTTAACAAAAT
TATTTTATAATAATCCTTGTCTGCAATCATCTCTAGGCACCAGCAATGGT
ACATCAATCATCAACATTTTAGAAAACCAATAGCTTCGGGCCAAATTCAA
CCAAAGGATACACCTACGAGACCAAGCCAACTGCTTGATGAGAAAAGGTG
GCTTCCCTTAGAAATTATAAACAATCATCAATCCAAGTTTCAAAAGTTAC
CTGCCATTGTTGCTCCTAAAACTGGATCACACGCTGTTCAACCAACTGAG
TGGAGCTTTGTGAACAACACAAGCGTCACAGAATATATATCTAACAAACC
CAATGAACCTCGCAACTATTCCAGCAGTTTAAAGCTAGAATTTGATCCCC
CATTTCGGATTAAGGTAAATTAACTAGGTTTCAACAAAAATGAGAAGGTT
GTCTACCTTGTTTCTTCACCATATTGACACGCAATTATTTGATTTGTTAT
GCAGAAAGACGAGCAACAATTACCTGATTTGCAACTGAGTTTGAGTTACA
CAGTTGCAAGCGATGGTGGCAAGATGAATCATTACAGAGAAACCCAGGAA
ATTAGCACCAAGCTTTCACTTTCTTAATGTTAATAACCCAGATATCATTA
GCCGAGTTAGCTAATTATATAAATAGAGAGACCATATATTGAAAAAAGGA
GAATAGATTCACAAGATCGATCAATGTATGTACAAGACATAGGCTACTTG
CTATTTTTTCAATTTGAATCTACATGAGATCTGATTGTAAAAGGAATTGT
GTCAGGGTTGATAGAGGTAGGCATTATCCATTTTTGTGTGCAAATGATTG
CTTAAAGTGTGAAGAGAACAGGCAGTAGAAAAAGGATGGAACAAAAAAGA
GTGAGAATATGTTGGTCTTGCTTTAGAGATTGATACTTCACTTTGCATTG
ATCAAATAAAAAATTTATCAGTTGATCTCTCTCCACCATCTATCTTCCCA
TTCAAAATTTCATTCCTACATTTACATCTCAATGGTTCTTATATAAATAA
AGTTAACAAGTGT
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Coding sequence (CDS) from alignment at Chr06:27814996..27819558+

>Phvul.006G175300.1_Pv_G19833_v2.1 ID=Phvul.006G175300.1_Pv_G19833_v2.1; Name=Phvul.006G175300.1; organism=Phaseolus vulgaris; type=CDS; length=1095bp; location=Sequence derived from: Chr06:27814996..27819558+ (Phaseolus vulgaris
ATGTCAGAAGGACATGAGATTCATAGCAATGAGGAAGCTTCATCGGGATG
TTCCCAGAAATGCTCTTCATTTGACTTGAATACTGAAGCTTGCAGTGACG
ATAACACCAACGGTAGTACAGAAGAGGGCTATGAGCTCACAACCGACGAG
AATAATATTGAGAAAGTAAAGGATGAGGGAACTTCAGCAAATAATGGAAG
TAGCATTTCAAGAGAAGGCAATGAGAGAAGAGGAACGGTGAGACAATATG
TTAGATCCAAGATGCCTCGGCTTCGGTGGACTCCTGAACTTCATCATTCA
TTTATGCATGCTGTTGAAAGACTTGGTGGACAAGAGAGAGCAACACCCAA
GTTGGTGCTTCAGCTAATGAATGTGGAAGGACTTAGCATTGCTCACGTCA
AGAGCCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAGGTTGGGCAA
GTACTGAGTCAAAGGTCGAACCAAAGGGTACGATCTGTGATGCTTCATCA
GTCCATGAGTCCTCAACAACATCTTAAGATGGGGAATGGTGGAATCATTC
TGGCAACTCAATTCGACAAACATTGTCATTTCCCAAGTCTCATGCAGACC
CCCTTCCCCCTATCACGTTCCCATGCAAATGACACCAATTCAAGGCACCA
GCAATGGTACATCAATCATCAACATTTTAGAAAACCAATAGCTTCGGGCC
AAATTCAACCAAAGGATACACCTACGAGACCAAGCCAACTGCTTGATGAG
AAAAGGTGGCTTCCCTTAGAAATTATAAACAATCATCAATCCAAGTTTCA
AAAGTTACCTGCCATTGTTGCTCCTAAAACTGGATCACACGCTGTTCAAC
CAACTGAGTGGAGCTTTGTGAACAACACAAGCGTCACAGAATATATATCT
AACAAACCCAATGAACCTCGCAACTATTCCAGCAGTTTAAAGCTAGAATT
TGATCCCCCATTTCGGATTAAGAAAGACGAGCAACAATTACCTGATTTGC
AACTGAGTTTGAGTTACACAGTTGCAAGCGATGGTGGCAAGATGAATCAT
TACAGAGAAACCCAGGAAATTAGCACCAAGCTTTCACTTTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding