Phvul.006G192000.1

Transcript Overview
NamePhvul.006G192000.1
Unique NamePhvul.006G192000.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:29169723..29172357 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL159Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL248Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuR519Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR533Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crpvL085Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL075Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL078Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL764Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL628Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0110Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0174Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1036Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0490Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0633Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0673Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0950Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1173Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL078Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL214Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL726Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvvfhR538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR556Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR585Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR532Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR550Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR577Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR482Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR496Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR515Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR461Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR467Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR608Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR611Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR612Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR642Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL074Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL075Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL611Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL099Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL315Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL694Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL070Cicer arietinum
carpvL074Cicer arietinum
carpvL610Cicer arietinum
carpvL611Cicer arietinum
ccapvL143Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL491Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL782Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL832Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR569Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR612Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR618Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR627Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR632Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR581Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR598Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR625Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR577Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR616Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR582Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR621Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR637Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR628Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR633Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR637Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR486Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR489Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR499Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR500Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR481Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg38155.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.1g393800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan09g249800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.1g478400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_09048Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.05G035700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_05G00280.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.05G027200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun06g208000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cr_00686.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_027333118.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun06g208000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058870042.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va09G061170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_08004Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_017561Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_00239Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014662573.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr06.2086Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_19963.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr06.2105Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G192000Phvul.006G192000_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G192000.1Phvul.006G192000.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G192000.1_Pv_G19833_v2.1Phvul.006G192000.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G192000.1.v2.1.five_prime_UTR.1Phvul.006G192000.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.006G192000.1.v2.1.five_prime_UTR.2Phvul.006G192000.1.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G192000.1.v2.1.CDS.1Phvul.006G192000.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G192000.1.v2.1.CDS.2Phvul.006G192000.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G192000.1.v2.1.CDS.3Phvul.006G192000.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G192000.1.v2.1.three_prime_UTR.1Phvul.006G192000.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
[Close]
BLAST of Phvul.006G192000.1 vs. DB:Swiss
Match: FBD4_ARATH (Putative FBD-associated F-box protein At1g61330 OS=Arabidopsis thaliana OX=3702 GN=At1g61330 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.227e-44
Identity = 118/420 (28.10%), Postives = 211/420 (50.24%), Query Frame = 1 
Query:   79 IFQHLPFEIMEQIISFLPIRQAKQQCILSSDFRSSTHISRRFLFGRVFSKRRSRESIVELVDHLFATHRGLYIDAFQIYIDPVGIENFIQKWLEICREKRIQELELFFVDSGFTLTADF-LNQLFRLSTLKLVHCNLELPVXXXXXXXXXXXXXWF-VPLKDENIHTLISHCRQLVTVDLLYC--TEVVCVEIYAREHKFLKRVRVARCKNVEVFVVDSATIECVHYRGHVPTRIRFFQTTKLNEAYLNFVPAGSRGYFQASVLENLVSDIPHVKILSASALVPESLTAKVRRGVFGEASYSFSNLIELHLIMEGGLFCNPYDILAFMKRCPLVEKLFIDIDDYTFDCGPY-WEFHQKSKMEKF---DLCFDRLNYIKLRGFKFIAAELQLAKILLQKTTHLDALVLVSQKNCVANICTP 1314
            + + L  E++E I+SFLP++   Q  +LS  +R +  +SR   F  +FS RRS+   V +++ +F  H+G  ID F + +D  G+E+ I  W++ C  K I+EL L F  S   +      +    L+ LKL  C  E+P NL     L   +      + +E I ++ ++C  L +++L+ C  +    + IYA +HK  K + V+   N+    +D+ T+EC  Y G+  T I   +   L EA  ++     R +   +V++++++    V  L+ + ++ E++T +  +G   +  + F NL E  +  +   FC  +DI  F+K CP +E+  IDI ++TF+   Y WE H K++++     +     L  +K+ G+K    EL + +  ++    L  L L   KN   +  TP
Sbjct:   11 LIKRLSDELVECILSFLPVQSTLQHRVLSKRYRDTWKLSRDLDFSGIFSVRRSQSEAVRIIEDVFIQHQGPEIDRFVLSLDHTGVEDKILSWVDTCLRKNIKELVLDFSSSKKVMEIPLNFSSSETLTVLKLQWCRFEIPNNLPKGLRLLKTLSLMRTEVTNEMIDSIFNNCIHLESLELVKCQMSGNGILTIYAHDHKKFKSLVVSCMPNLLSIFLDAPTLECYKYDGYAKT-INVLKVNALEEAEFHY-SRSKRRHSSDTVVDSMLA-CSAVHALTTTNILLEAITYRYLKGKLEKPLFKFENLREFKIFFKAPTFCTLFDIAEFLKECPKLEQFIIDIQNFTFEPQMYFWEIHHKAQIQNTSNNNYLLKCLTDVKIIGYKGHWHELDIVEFFVKNAPSLKRLELQMPKNAKNDAHTP 427
[Close]
BLAST of Phvul.006G192000.1 vs. DB:Swiss
Match: FBD33_ARATH (FBD-associated F-box protein At1g61320 OS=Arabidopsis thaliana OX=3702 GN=At1g61320 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.111e-33
Identity = 113/438 (25.80%), Postives = 206/438 (47.03%), Query Frame = 1 
Query:   28 SKRLRTVSQPTATLSPNIFQHLPFEIMEQIIS-FLPIRQAKQQCILSSDFRSSTHISRRFLFGRVFSKRRSRESIVELVDHLFATHRGLYIDAFQIYIDPVGIENFIQKWLEICREKRIQELELFFVDSG--FTLTADFLNQLFRLSTLKLVHCNLELPVXXXXXXXXXXXXXWF-VPLKDENIHTLISHCRQLVTVDLLYCTEVVCVEIYAREHKFLKRVRVARCKNVEVFVVDSATIECVHYRGHVPTRIRFFQTTKLNEAYLNFVPAGSRGYFQASVLENLVSDIPHVKILSASALVPESLTAK-VRRGVFGEASYSFSNLIELHLIMEGGLFCNPYDILAFMKRCPLVEKLFIDIDDYTFDCGPY-WEFHQKSKMEKF---DLCFDRLNYIKLRGFKFIAAELQLAKILLQKTTHLDALVLVSQKNCVANICTP 1314
            +KR R     ++       + +P +++E ++S +LP++      +LS  FR +   S    F  ++S+RR +  +V +++ +F  H+G  I  F + ++ +G+E+ I  W   C +K I+EL L F  S     +  DF + +  L  LKL  C  E+P +      L   +      +  + I  + ++C  L +++L+ C     + I A+ HK  K + V+   ++    +D+ T+E   Y G+V   +    T  L EA L +     R Y Q S L + +     + +L+ + +  E+LT + V  G      + F NL E  +      FC  +DI  F+K CP ++++ IDI ++TF+   Y WE H K++++     +     L  +K+ G+K    EL + +  ++    L  L L   KN   +  TP
Sbjct:    5 TKRTRVEMAESSNKRMKPSETVPEDVLELMMSTYLPVQSLLTTRVLSKRFRETEVRSLDLDFSGIYSRRRRKVEVVGIIEKVFNQHKGSEIHRFVLLLNHIGVEDKIISWTNTCFDKNIKELVLDFSKSRKVMAIPIDF-SAVESLQVLKLRWCKFEIPDSSPKGLKLLKTLSLMRTQVMVKTIDAIFNNCIHLESLELIECRMDGILSIRAQNHKKFKSLVVSFMPDLRHIRLDAPTLENYKYDGYVIC-VNILITNALKEANLYYTRI-RRLYHQKSDLVDTLRFYTRLTVLATTTIFLEALTKRYVGEGRLENPPFKFENLTEFKISFITPTFCTLFDIAEFLKECPKLKQVVIDIQNFTFEPQMYFWEIHHKAQIQNTSNNNYLLKCLTDVKIIGYKGHWHELDIVEFFVKNAPSLKRLELQMPKNAKNDAHTP 439
The following BLAST results are available for this feature:
BLAST of Phvul.006G192000.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
FBD4_ARATH4.227e-4428.10Putative FBD-associated F-box protein At1g61330 OS... [more]
FBD33_ARATH2.111e-3325.80FBD-associated F-box protein At1g61320 OS=Arabidop... [more]
back to top
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..483
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 122..398
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 24..68

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G192000.1_Pv_G19833_v2.1

>Phvul.006G192000.1_Pv_G19833_v2.1 ID=Phvul.006G192000.1_Pv_G19833_v2.1; Name=Phvul.006G192000.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=484bp
MVRIKTHCGSKRLRTVSQPTATLSPNIFQHLPFEIMEQIISFLPIRQAKQ
QCILSSDFRSSTHISRRFLFGRVFSKRRSRESIVELVDHLFATHRGLYID
AFQIYIDPVGIENFIQKWLEICREKRIQELELFFVDSGFTLTADFLNQLF
RLSTLKLVHCNLELPVNLLSLANLRNLILWFVPLKDENIHTLISHCRQLV
TVDLLYCTEVVCVEIYAREHKFLKRVRVARCKNVEVFVVDSATIECVHYR
GHVPTRIRFFQTTKLNEAYLNFVPAGSRGYFQASVLENLVSDIPHVKILS
ASALVPESLTAKVRRGVFGEASYSFSNLIELHLIMEGGLFCNPYDILAFM
KRCPLVEKLFIDIDDYTFDCGPYWEFHQKSKMEKFDLCFDRLNYIKLRGF
KFIAAELQLAKILLQKTTHLDALVLVSQKNCVANICTPYGRKYDQLFHSW
KASPEAKIVTFEHTDDPGRSSSSHSKEWLFSSD*
back to top

mRNA from alignment at Chr06:29169723..29172357+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G192000.1_Pv_G19833_v2.1 ID=Phvul.006G192000.1_Pv_G19833_v2.1; Name=Phvul.006G192000.1; organism=Phaseolus vulgaris; type=mRNA; length=2635bp; location=Sequence derived from: Chr06:29169723..29172357+ (Phaseolus vulgaris
AAAGCCTCAAAACCAGGCATGTTTTAGAAAGCATGCAGGGAATGATAACA
AGCGAAACGACATGGGCTCCTTGTGAAGCACATGTCGTTTCATGCGCTTG
ACTAGGGATTTTGACATGCCACGTCACTGTTAAAGTGGATGCATGTTTTT
GTCCGAACCTTGCACAGAAAGCAGCATAGTGAGAAAACACAGCACAGTTT
GGTGTTTTCATGAGCAACAACGTTTAAGGTAACATCATTAATTTGATGCG
AGTTTTTCAGCTATAAAAAATCCCCAATGTCCTCAAACTCTTTCATCAGG
TTCTGGGTTCACCATTTCTTCAAACCTCAGAACCAATCCTTCTCATTTTC
TCTTCCAATTTTTCTTCTTCAGTTTCAATTCTTCATTTTCCGATGGTCAG
AATCAAAACTCACTGCGGATCCAAGAGACTCAGAACCGTCTCACAGCCTA
CGGCGACACTGTCTCCGAATATTTTCCAACATCTTCCATTTGAAATTATG
GAGCAAATTATCTCCTTTTTACCCATCAGACAGGCAAAGCAGCAATGCAT
TCTCTCATCGGACTTTCGGAGTTCCACCCATATCAGTCGCAGATTCTTGT
TCGGAAGAGTTTTCTCGAAGCGACGGAGCCGAGAGTCCATCGTTGAATTG
GTGGATCACCTGTTTGCGACTCACAGGGGTCTCTACATTGATGCTTTTCA
AATCTACATTGACCCTGTTGGGATTGAAAACTTCATCCAGAAGTGGCTCG
AGATTTGCCGTGAGAAGAGAATTCAGGAACTGGAGTTGTTTTTTGTGGAC
TCCGGGTTCACTCTCACCGCAGATTTTCTCAACCAGCTCTTTAGATTGAG
TACCTTGAAACTGGTCCATTGCAATTTGGAGTTACCAGTAAACCTCTTGA
GTTTGGCGAATCTGAGAAATCTGATTCTGTGGTTTGTCCCTCTCAAAGAT
GAAAATATTCACACTTTGATATCTCATTGCAGGCAGCTTGTGACTGTTGA
TCTGCTTTACTGTACTGAAGTTGTGTGTGTTGAAATATATGCTAGGGAGC
ACAAATTTCTCAAAAGGGTGAGAGTTGCTCGCTGTAAGAATGTGGAAGTG
TTTGTGGTTGATTCCGCCACTATTGAGTGTGTGCACTATCGTGGGCATGT
CCCAACAAGAATCCGGTTTTTTCAGACAACTAAACTGAATGAGGCTTACC
TCAATTTTGTGCCTGCTGGGAGCAGAGGGTATTTCCAGGCTTCTGTGCTG
GAAAACCTTGTCAGTGACATCCCACATGTCAAGATTCTATCAGCTTCTGC
TCTGGTTCCTGAGGTATATACATTTTATGTGTTAAATACAGTTTATTAGA
TGATGCATGTTATAGCTCTTATGAAGAATCAAAGTTTTACTTTTAGTGGT
CTGTGTAAGTTAAGGATCTGCATGTAAATCTTGTCTTTTTGATAGATTGA
TGGTGACAATTTTATTTTTATCGGAATTCAGTCTTTGACCGCTAAGGTTC
GTCGTGGAGTTTTTGGAGAGGCTAGCTACAGTTTCTCCAATCTGATCGAG
CTTCATTTGATCATGGAAGGGGGGCTTTTTTGCAATCCATACGATATTCT
TGCGTTCATGAAGAGGTGCCCTCTCGTGGAGAAGCTTTTCATTGATGTGA
GTCTGACATTAATTAATCCTCAATCAATAATTAACAGTAGTTATTGATTG
CTTATTGATGATTTTATGACGCGTAGGAATAATATATTATACTTTTCTCA
GCTGGTGTATTCATTCCTATCTCAGTTTTCCATCAAAAGTTTTTCAATTC
CACTCATTCTTAACACAATTTCACTAAGGAAAAAGTGTATACATGTGGAT
AATAAATTACTTTAAACTTTTGATACATATAGAATATGAGTTATGAGAAG
TATATTTATGATTTTTACAAATCTTTTAAGTATAATGATCACTTTCAATT
ACAATCTTTCTTTCTAAACTATATTGCAGATAGATGATTACACTTTTGAC
TGCGGACCATACTGGGAATTTCATCAAAAGTCTAAGATGGAAAAATTTGA
TCTCTGCTTTGATCGGCTCAATTATATCAAGCTTAGAGGTTTTAAGTTTA
TAGCAGCTGAACTTCAACTAGCGAAGATCCTTCTGCAGAAAACAACCCAT
TTGGATGCTCTGGTTCTGGTCTCACAAAAGAACTGTGTTGCTAATATATG
CACACCATATGGACGCAAATATGATCAACTTTTTCACTCTTGGAAAGCAT
CGCCAGAAGCAAAAATAGTTACATTTGAGCATACGGATGATCCTGGTCGC
TCCAGTTCATCCCATTCAAAAGAGTGGTTATTTTCATCCGACTAGAGTCT
TGGTATAAGAATAAACATTTCAATTAGTTTATCATTTACAGGGATAACAT
TGGAGTAAGTTCCTTTAATCAACTAAAGTTATTAGACAAAGGAGTTATCA
CAAAAGTTCAGGTAGTTTCATGATTAGTTTATAGTGATGTAACATTTACT
TTTCCTTGCATCCTTGTTTAGTGTTGTGAGATTAAAGATAATGCGATGGT
GATTACATTGTACAATGTGATGCTAGAAGCCATAAAAAATAGTTAGGGGT
CGGTTTAGTAGTGATCAGATTGAAAAAAAGGGGTG
back to top

Coding sequence (CDS) from alignment at Chr06:29169723..29172357+

>Phvul.006G192000.1_Pv_G19833_v2.1 ID=Phvul.006G192000.1_Pv_G19833_v2.1; Name=Phvul.006G192000.1; organism=Phaseolus vulgaris; type=CDS; length=1452bp; location=Sequence derived from: Chr06:29169723..29172357+ (Phaseolus vulgaris
ATGGTCAGAATCAAAACTCACTGCGGATCCAAGAGACTCAGAACCGTCTC
ACAGCCTACGGCGACACTGTCTCCGAATATTTTCCAACATCTTCCATTTG
AAATTATGGAGCAAATTATCTCCTTTTTACCCATCAGACAGGCAAAGCAG
CAATGCATTCTCTCATCGGACTTTCGGAGTTCCACCCATATCAGTCGCAG
ATTCTTGTTCGGAAGAGTTTTCTCGAAGCGACGGAGCCGAGAGTCCATCG
TTGAATTGGTGGATCACCTGTTTGCGACTCACAGGGGTCTCTACATTGAT
GCTTTTCAAATCTACATTGACCCTGTTGGGATTGAAAACTTCATCCAGAA
GTGGCTCGAGATTTGCCGTGAGAAGAGAATTCAGGAACTGGAGTTGTTTT
TTGTGGACTCCGGGTTCACTCTCACCGCAGATTTTCTCAACCAGCTCTTT
AGATTGAGTACCTTGAAACTGGTCCATTGCAATTTGGAGTTACCAGTAAA
CCTCTTGAGTTTGGCGAATCTGAGAAATCTGATTCTGTGGTTTGTCCCTC
TCAAAGATGAAAATATTCACACTTTGATATCTCATTGCAGGCAGCTTGTG
ACTGTTGATCTGCTTTACTGTACTGAAGTTGTGTGTGTTGAAATATATGC
TAGGGAGCACAAATTTCTCAAAAGGGTGAGAGTTGCTCGCTGTAAGAATG
TGGAAGTGTTTGTGGTTGATTCCGCCACTATTGAGTGTGTGCACTATCGT
GGGCATGTCCCAACAAGAATCCGGTTTTTTCAGACAACTAAACTGAATGA
GGCTTACCTCAATTTTGTGCCTGCTGGGAGCAGAGGGTATTTCCAGGCTT
CTGTGCTGGAAAACCTTGTCAGTGACATCCCACATGTCAAGATTCTATCA
GCTTCTGCTCTGGTTCCTGAGTCTTTGACCGCTAAGGTTCGTCGTGGAGT
TTTTGGAGAGGCTAGCTACAGTTTCTCCAATCTGATCGAGCTTCATTTGA
TCATGGAAGGGGGGCTTTTTTGCAATCCATACGATATTCTTGCGTTCATG
AAGAGGTGCCCTCTCGTGGAGAAGCTTTTCATTGATATAGATGATTACAC
TTTTGACTGCGGACCATACTGGGAATTTCATCAAAAGTCTAAGATGGAAA
AATTTGATCTCTGCTTTGATCGGCTCAATTATATCAAGCTTAGAGGTTTT
AAGTTTATAGCAGCTGAACTTCAACTAGCGAAGATCCTTCTGCAGAAAAC
AACCCATTTGGATGCTCTGGTTCTGGTCTCACAAAAGAACTGTGTTGCTA
ATATATGCACACCATATGGACGCAAATATGATCAACTTTTTCACTCTTGG
AAAGCATCGCCAGAAGCAAAAATAGTTACATTTGAGCATACGGATGATCC
TGGTCGCTCCAGTTCATCCCATTCAAAAGAGTGGTTATTTTCATCCGACT
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding