Phvul.007G206600.1

Transcript Overview
NamePhvul.007G206600.1
Unique NamePhvul.007G206600.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07supercontigChr07:32937603..32939454 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL028Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL030Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL235Pisum sativum Cameor genome v1aPisum sativum
pspvL632Pisum sativum Cameor genome v1aPisum sativum
pvvuR576Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR577Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR619Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR628Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0306Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0311Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0434Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0499Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL282Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL285Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL394Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL449Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL241Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL247Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL362Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0589Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0595Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0920Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0936Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0497Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0501Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0795Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0964Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0967Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL445Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL465Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL535Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL547Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR545Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR562Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR572Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR612Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR602Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR660Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR670Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR674Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR594Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR650Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR548Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR550Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR570Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR614Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR507Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR534Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR561Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR691Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR717Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR723Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR737Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR749Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL225Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL232Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL330Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL367Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL411Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL429Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL508Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL527Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL232Cicer arietinum
carpvL239Cicer arietinum
carpvL340Cicer arietinum
carpvL383Cicer arietinum
ccapvL303Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL317Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL387Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL404Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR635Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR644Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR675Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR709Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR714Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR654Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR657Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR664Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR728Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR730Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR645Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR661Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR682Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR645Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR692Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR670Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR674Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR721Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR693Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR724Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR531Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR533Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR555Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR570Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR587Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR531Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR532Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR570Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR579Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_010958Cajanus cajan Asha genome v1.0Cajanus cajan
Va02G050380.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun01g205600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.08G145100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_01070Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004495769.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg2904.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun01g205600.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Hedin2.R1.3g094040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_08197.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.08G143900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_03818.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004494442.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_08185.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058914367.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.04G253300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat03G0074300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
XM_058886514.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat6g156520.1Pisum sativum Cameor genome v1aPisum sativum
Ca_03572Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg31175.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_05640.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_003870Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_08G01497.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.08G187800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004495782.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_07480Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr01.1948Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_08094.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_09265.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.5g172200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058914377.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va02G050530.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014658955.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g133900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan02g154100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_03584Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun07g132600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_03830.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_09276.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_07199.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va03G079260.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_04G02837.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.04G378600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan02g155500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014656954.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr07.1468Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0427500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan03g269800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.08G186700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-TanjilR_17018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_17008Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_003858Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014639644.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_05325Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_08081.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun07g133900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg2923.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun07g132600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_08G01485.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr07.1479Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0424500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_010978Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.1001486Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr07.1001320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.001G221200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr07.1316Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.007G206600Phvul.007G206600_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G206600.1Phvul.007G206600.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.007G206600.1_Pv_G19833_v2.1Phvul.007G206600.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G206600.1.v2.1.five_prime_UTR.1Phvul.007G206600.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G206600.1.v2.1.CDS.1Phvul.007G206600.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G206600.1.v2.1.CDS.2Phvul.007G206600.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G206600.1.v2.1.three_prime_UTR.1Phvul.007G206600.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 7.436e-106
Identity = 145/197 (73.60%), Postives = 169/197 (85.79%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANV-PAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            DPD LQDLCVAD +SG+KVNGFTCK  S + ASDFF + + KP   NNT GS VTGANVEK+ GLNTLGVSL+RIDYAP G+NPPHTHPRATE++FVLEG+LDVGFITTAN L +KT+ KGE+FVFP+GL+H+QKNN    PA+VISAFNSQLPGTQSIA TLF ATP++PDHVLT TFQIGTKE++KIK++  PKK
Sbjct:   23 DPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 3.515e-104
Identity = 146/196 (74.49%), Postives = 169/196 (86.22%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            DPDLLQD+CVAD +S VKVNGF CK A  V   DF+   LA  G TNNT+GS+VTGANVEK+PGLNTLGVS+SRIDYAP G+NPPHTHPRATE+VFVL+G LDVGFITTAN L +KTI+ G++FVFP+GL+HFQKNN + PAAVISAFNSQLPGTQS+A TLFAA+P +PD VLTK FQ+GTKEV+KIK+RL PKK
Sbjct:   27 DPDLLQDICVADLTSAVKVNGFACKAA--VTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSRLAPKK 220          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 1.248e-100
Identity = 137/196 (69.90%), Postives = 166/196 (84.69%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            DPD+LQDLCVAD  SG+K+NGF CK+A+ V ++DFFS  LAKPG TNNTFG+LVTGANV  +PGLNTLGVSLSRIDYAP G+NPPHTHPRATE+VFVLEG LDVGF+TTAN LIS+++ KG++F FPKGLVHFQKNN +VPA+VI+AFNSQLPGTQS+  TLF +TP +PD++L + FQ     V+ IK++  PKK
Sbjct:   24 DPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSKFQPKK 219          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 1.688e-99
Identity = 138/196 (70.41%), Postives = 161/196 (82.14%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            DPD LQDLCVAD S G K+NGF CKE   +  SDFF + ++KP   N+T GS VTGANVEK+PGLNTL VSL+RIDYAP G+NPPHTHPRATE+V+VLEG+L+VGFITTAN L +KTI  GE+FVFP+GLVHFQKNN   PA+V+SAFNSQLPGT S+A TLFAA P+LP+ VLTKTFQ+G+K V KIK RL  KK
Sbjct:   24 DPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.537e-99
Identity = 142/196 (72.45%), Postives = 166/196 (84.69%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            D D+LQD+CVAD  S VKVNGF CK  +   A+DF S  ++KPGATNN FGS+VT ANVE+VPGLNTLGVSL+RIDYAP GINPPHTHPRA+E+VFV+EG+LDVGFITTANVL+SK I KGE+FVFP+GLVHFQKNN  VPAAVISAFNSQLPGTQSI  TLF A+P +PD VL +TFQI T++VQ+IK++  P K
Sbjct:   34 DEDMLQDVCVADLHSKVKVNGFPCK--TNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKFAPVK 227          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 3.911e-99
Identity = 142/188 (75.53%), Postives = 160/188 (85.11%), Query Frame = 1
Query:  106 CVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            CVAD +S + VNGF CK AS V A DFFS++L K GATNNTFGSLVTGANV+++PGLNTLGVS++RIDYAP G+NPPHTHPRATE+VFVLEGQLDVGFITT N LI+KTI KGE FVFPKGLVHFQKNN   PA VI+ FNSQLPGT +I  TLF ATP +PD+VLTK FQIGTKEVQKIK++  PKK
Sbjct:   30 CVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPKK 217          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.560e-98
Identity = 139/196 (70.92%), Postives = 165/196 (84.18%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            D D+LQD+CVAD  S VKVNGF CK  +   A+DF S  ++KPGATNN FGS VT ANVE+VPGLNTLGVSL+RIDYAP GINPPHTHPRA+E+VFV+EG+LDVGFITTANVL+SK I KGE+FVFP+GLVHFQKNN  +PAAV+SAFNSQLPGTQSI  TLF A+P++PD VL +TFQI  ++VQ+IK++  P K
Sbjct:   34 DEDMLQDVCVADLHSKVKVNGFPCK--TNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKFAPAK 227          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana OX=3702 GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.790e-89
Identity = 123/194 (63.40%), Postives = 160/194 (82.47%), Query Frame = 1
Query:   88 DLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            ++LQD+CVAD S+ VKVNG+TCK+++++   DF+   LA   ATN + GS+VTGANVEK+PGLNTLG+S+SRIDYAP+G+NPPH HPRA+EI+FVLEGQL VGF+TTA  LI+K +NKG++F FPKGL+HFQKN AN PA+V++AF+SQLPGTQS+  +LF A   LPD +L K+FQ+  K+V+KIK R  PKK
Sbjct:   23 EMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGA---LPDDILAKSFQLKHKQVKKIKLRYAPKK 213          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=GER8 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.778e-85
Identity = 121/199 (60.80%), Postives = 149/199 (74.87%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSS---GVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669
            DPD+LQD+CVAD  S    +++NGF CK    V A+DFF   L K G T N  GS+VT A+VE +PGLNT+GVS++RIDYAP G+NPPHTHPRATEI+FV+EG LDVGF+TTAN L ++T+ KGE+FVFP+GLVHFQKNN N PA  I+A NSQLPGTQSIA  LF A P LP   L + FQ+    V+ IK++ +P K
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFVPPK 222          
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 1.863e-82
Identity = 118/198 (59.60%), Postives = 148/198 (74.75%), Query Frame = 1
Query:   82 DPDLLQDLCVADPSS---GVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPK 666
            DPD+LQD+CVAD  S    +++NG  CK    V A+DFF   L   G T N  GSLVT A+VE++PGLNT+GVS++RIDYAP G++PPHTHPRATEI+FV EG LDVGF+TTAN L ++T++KGE+FVFP+GLVHFQ+N+ N  A  I+AFNSQLPGTQSIA TLF A P LP   L + FQ+    V+ IK++  PK
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKFPPK 221          
The following BLAST results are available for this feature:
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
GL24_ARATH7.436e-10673.60Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL52_ORYSJ3.515e-10474.49Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL21_ARATH1.248e-10069.90Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL22_ARATH1.688e-9970.41Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
NEC1_NICLS2.537e-9972.45Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
RHRE_PEA3.911e-9975.53Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=G... [more]
NEC1_NICPL1.560e-9870.92Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN... [more]
GL25_ARATH2.790e-8963.40Probable germin-like protein subfamily 2 member 5 ... [more]
GL13_ORYSJ6.778e-8560.80Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ1.863e-8259.60Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
back to top
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 176..191
score: 50.15
coord: 143..163
score: 57.25
coord: 113..133
score: 65.12
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 64..213
e-value: 1.7E-37
score: 140.5
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 67..213
e-value: 8.2E-48
score: 161.8
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 27..220
e-value: 1.1E-78
score: 265.3
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 108..121
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 58..217

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.007G206600.1_Pv_G19833_v2.1

>Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=224bp
MVNHTMKLPNFVLLLTSALLLATTVSSDPDLLQDLCVADPSSGVKVNGFT
CKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLS
RIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEI
FVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHV
LTKTFQIGTKEVQKIKTRLLPKK*
back to top

mRNA from alignment at Chr07:32937603..32939454+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1; organism=Phaseolus vulgaris; type=mRNA; length=1852bp; location=Sequence derived from: Chr07:32937603..32939454+ (Phaseolus vulgaris
CCCAAAAATTAAGAAATAAATACCCTATTTTTCATTTTTCCTGTCAAACC ACAGCTTTGAGATCTGTGATGCTATAAATATAAGAGCAGTGTTGATCCTC CCAAGTCTTTCCAACTACCAACTACTTTGCCTTTTTTTATTTCTTTTCAT TTCCATTTTGTTAACTTATTGGCTTCCAAAGTATATTATGGTTAACCATA CTATGAAGCTTCCCAACTTTGTTCTTCTTCTCACTTCGGCTCTTCTCTTA GCCACCACCGTCTCATCGGATCCTGACCTTCTTCAAGACCTCTGTGTCGC CGACCCTTCCTCAGGTTCTCCTCCTTTTACACTACTCTATTCCTTTTTTT CTTTCTCATTCTATTCATTATACAAGCAGAGGACTCTGCAATTTTTCATG CAAGTGTATCCAATTAAGAAGAAAGACATTTGATTTACATTTTAAAATAC CCTTAAAATAGTTCAAAACATTAAACTAAACAAATTTCTCTTGTGTAGTT TTTGGATCTGAAAATTTGAGCCTTTGCCTCAATTTTACCTTACAATTCAG TTTGAAATGGAAGAAAACGAAGAGTTTCTGATAAAAGGGCTCAGTTTGTC AATAAATTTCCAATTTTTCATTTAAACATGCAATGAAAAGAATTTCTCTT CCCCCTCTCTTTGTATTTTAGTAGTTTTTGTCCTCTGAATAATCAAAGTT GATCCTTTGAACCTTTTCTTTCTTTCCTTCGTTTGGTTTTCTTTAAACCA CTCTAACTTAACATCACTGTCCAAGACATAATTCTTCTACCTACTACTTT AATTTTGCTTTGTCCTGACTCCTCTGTTTGATCATTTTAACTCCAATATA GTATTCCCACTAACATCATTAACTCCTTTGATTTTTATTTTTTCTAAAAA CAACCTTAACATTGTCATAATTGCAACATTTTCCAGCATAATTCACAACT GGCAAGTGCAACTGTGTAAGGTAGAGACTTCTTTTTCTAAATTCAATTTT TATGCACCTTAGCATGTTCTGGAAAGCTAAAAGTTTTGAATTTCAAGTGT CTTCTAGGGAAAAAAATGACTTGAATAGTATGAATTAAAATGTCAATACT GTATTTACTCTGATGGTAATTGGACTGTGATGGAAAACAGGTGTGAAAGT GAATGGATTCACCTGCAAAGAAGCATCTAAGGTTAATGCCTCAGATTTCT TCTCCAGCATACTAGCCAAACCAGGAGCCACCAACAACACCTTTGGGTCC TTGGTGACTGGAGCCAATGTTGAGAAAGTCCCAGGACTCAACACCCTTGG TGTGTCTCTGTCAAGGATTGACTATGCACCAGATGGCATCAACCCTCCTC ACACTCACCCTCGTGCCACTGAGATTGTGTTTGTACTTGAAGGGCAACTA GATGTAGGGTTCATAACCACTGCCAATGTGCTCATATCAAAAACCATTAA CAAGGGTGAAATATTTGTGTTTCCAAAAGGCTTGGTTCACTTCCAGAAGA ACAATGCCAATGTCCCTGCTGCTGTCATTTCAGCCTTCAATAGCCAACTT CCAGGAACACAGTCCATCGCTACAACCTTGTTTGCTGCCACACCATCACT TCCAGACCATGTCTTGACCAAGACCTTCCAGATTGGAACCAAGGAGGTTC AGAAAATCAAGACCAGGCTTCTACCTAAAAAGTAGAAACCATTAAATTGG TTTGGCCCTCGTGTCTTGTCAAGAATAAATACACTTTATTCATTCTTTCT GAAAAAAATTGAAAACCATGATTCTATATATGATGTGAAGATAAATTGAA ACCAAGTTATTCTAGAAGATTGATCGAGATAATGTAATAATTTCTCTTTC TG
back to top

Coding sequence (CDS) from alignment at Chr07:32937603..32939454+

>Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1; organism=Phaseolus vulgaris; type=CDS; length=672bp; location=Sequence derived from: Chr07:32937603..32939454+ (Phaseolus vulgaris
ATGGTTAACCATACTATGAAGCTTCCCAACTTTGTTCTTCTTCTCACTTC
GGCTCTTCTCTTAGCCACCACCGTCTCATCGGATCCTGACCTTCTTCAAG
ACCTCTGTGTCGCCGACCCTTCCTCAGGTGTGAAAGTGAATGGATTCACC
TGCAAAGAAGCATCTAAGGTTAATGCCTCAGATTTCTTCTCCAGCATACT
AGCCAAACCAGGAGCCACCAACAACACCTTTGGGTCCTTGGTGACTGGAG
CCAATGTTGAGAAAGTCCCAGGACTCAACACCCTTGGTGTGTCTCTGTCA
AGGATTGACTATGCACCAGATGGCATCAACCCTCCTCACACTCACCCTCG
TGCCACTGAGATTGTGTTTGTACTTGAAGGGCAACTAGATGTAGGGTTCA
TAACCACTGCCAATGTGCTCATATCAAAAACCATTAACAAGGGTGAAATA
TTTGTGTTTCCAAAAGGCTTGGTTCACTTCCAGAAGAACAATGCCAATGT
CCCTGCTGCTGTCATTTCAGCCTTCAATAGCCAACTTCCAGGAACACAGT
CCATCGCTACAACCTTGTTTGCTGCCACACCATCACTTCCAGACCATGTC
TTGACCAAGACCTTCCAGATTGGAACCAAGGAGGTTCAGAAAATCAAGAC
CAGGCTTCTACCTAAAAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR019780Germin_Mn-BS
IPR011051RmlC_Cupin_sf
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity