Phvul.007G206600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 7.436e-106 Identity = 145/197 (73.60%), Postives = 169/197 (85.79%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANV-PAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 DPD LQDLCVAD +SG+KVNGFTCK S + ASDFF + + KP NNT GS VTGANVEK+ GLNTLGVSL+RIDYAP G+NPPHTHPRATE++FVLEG+LDVGFITTAN L +KT+ KGE+FVFP+GL+H+QKNN PA+VISAFNSQLPGTQSIA TLF ATP++PDHVLT TFQIGTKE++KIK++ PKK Sbjct: 23 DPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 3.515e-104 Identity = 146/196 (74.49%), Postives = 169/196 (86.22%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 DPDLLQD+CVAD +S VKVNGF CK A V DF+ LA G TNNT+GS+VTGANVEK+PGLNTLGVS+SRIDYAP G+NPPHTHPRATE+VFVL+G LDVGFITTAN L +KTI+ G++FVFP+GL+HFQKNN + PAAVISAFNSQLPGTQS+A TLFAA+P +PD VLTK FQ+GTKEV+KIK+RL PKK Sbjct: 27 DPDLLQDICVADLTSAVKVNGFACKAA--VTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSRLAPKK 220
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 1.248e-100 Identity = 137/196 (69.90%), Postives = 166/196 (84.69%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 DPD+LQDLCVAD SG+K+NGF CK+A+ V ++DFFS LAKPG TNNTFG+LVTGANV +PGLNTLGVSLSRIDYAP G+NPPHTHPRATE+VFVLEG LDVGF+TTAN LIS+++ KG++F FPKGLVHFQKNN +VPA+VI+AFNSQLPGTQS+ TLF +TP +PD++L + FQ V+ IK++ PKK Sbjct: 24 DPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSKFQPKK 219
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g02335 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.688e-99 Identity = 138/196 (70.41%), Postives = 161/196 (82.14%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 DPD LQDLCVAD S G K+NGF CKE + SDFF + ++KP N+T GS VTGANVEK+PGLNTL VSL+RIDYAP G+NPPHTHPRATE+V+VLEG+L+VGFITTAN L +KTI GE+FVFP+GLVHFQKNN PA+V+SAFNSQLPGT S+A TLFAA P+LP+ VLTKTFQ+G+K V KIK RL KK Sbjct: 24 DPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.537e-99 Identity = 142/196 (72.45%), Postives = 166/196 (84.69%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 D D+LQD+CVAD S VKVNGF CK + A+DF S ++KPGATNN FGS+VT ANVE+VPGLNTLGVSL+RIDYAP GINPPHTHPRA+E+VFV+EG+LDVGFITTANVL+SK I KGE+FVFP+GLVHFQKNN VPAAVISAFNSQLPGTQSI TLF A+P +PD VL +TFQI T++VQ+IK++ P K Sbjct: 34 DEDMLQDVCVADLHSKVKVNGFPCK--TNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKFAPVK 227
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 3.911e-99 Identity = 142/188 (75.53%), Postives = 160/188 (85.11%), Query Frame = 1 Query: 106 CVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 CVAD +S + VNGF CK AS V A DFFS++L K GATNNTFGSLVTGANV+++PGLNTLGVS++RIDYAP G+NPPHTHPRATE+VFVLEGQLDVGFITT N LI+KTI KGE FVFPKGLVHFQKNN PA VI+ FNSQLPGT +I TLF ATP +PD+VLTK FQIGTKEVQKIK++ PKK Sbjct: 30 CVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPKK 217
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.560e-98 Identity = 139/196 (70.92%), Postives = 165/196 (84.18%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 D D+LQD+CVAD S VKVNGF CK + A+DF S ++KPGATNN FGS VT ANVE+VPGLNTLGVSL+RIDYAP GINPPHTHPRA+E+VFV+EG+LDVGFITTANVL+SK I KGE+FVFP+GLVHFQKNN +PAAV+SAFNSQLPGTQSI TLF A+P++PD VL +TFQI ++VQ+IK++ P K Sbjct: 34 DEDMLQDVCVADLHSKVKVNGFPCK--TNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKFAPAK 227
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana OX=3702 GN=At5g26700 PE=2 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 2.790e-89 Identity = 123/194 (63.40%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 88 DLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 ++LQD+CVAD S+ VKVNG+TCK+++++ DF+ LA ATN + GS+VTGANVEK+PGLNTLG+S+SRIDYAP+G+NPPH HPRA+EI+FVLEGQL VGF+TTA LI+K +NKG++F FPKGL+HFQKN AN PA+V++AF+SQLPGTQS+ +LF A LPD +L K+FQ+ K+V+KIK R PKK Sbjct: 23 EMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGA---LPDDILAKSFQLKHKQVKKIKLRYAPKK 213
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=GER8 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.778e-85 Identity = 121/199 (60.80%), Postives = 149/199 (74.87%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSS---GVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK 669 DPD+LQD+CVAD S +++NGF CK V A+DFF L K G T N GS+VT A+VE +PGLNT+GVS++RIDYAP G+NPPHTHPRATEI+FV+EG LDVGF+TTAN L ++T+ KGE+FVFP+GLVHFQKNN N PA I+A NSQLPGTQSIA LF A P LP L + FQ+ V+ IK++ +P K Sbjct: 24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFVPPK 222
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0651800 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 1.863e-82 Identity = 118/198 (59.60%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 82 DPDLLQDLCVADPSS---GVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPK 666 DPD+LQD+CVAD S +++NG CK V A+DFF L G T N GSLVT A+VE++PGLNT+GVS++RIDYAP G++PPHTHPRATEI+FV EG LDVGF+TTAN L ++T++KGE+FVFP+GLVHFQ+N+ N A I+AFNSQLPGTQSIA TLF A P LP L + FQ+ V+ IK++ PK Sbjct: 24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKFPPK 221 The following BLAST results are available for this feature:
BLAST of Phvul.007G206600.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.007G206600.1_Pv_G19833_v2.1 >Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=224bpback to top mRNA from alignment at Chr07:32937603..32939454+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1; organism=Phaseolus vulgaris; type=mRNA; length=1852bp; location=Sequence derived from: Chr07:32937603..32939454+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr07:32937603..32939454+ >Phvul.007G206600.1_Pv_G19833_v2.1 ID=Phvul.007G206600.1_Pv_G19833_v2.1; Name=Phvul.007G206600.1; organism=Phaseolus vulgaris; type=CDS; length=672bp; location=Sequence derived from: Chr07:32937603..32939454+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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