Phvul.007G215400.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_XENLA (Transmembrane protein 205 OS=Xenopus laevis OX=8355 GN=tmem205 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.071e-29 Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEVGWSKNVE----VAKSNPKLKAMNKKFGMIHGLSS 555 HLL S ++G W+TF+ G ++ K +PRH FG +QSK+FP Y +V C IS+A + HP + S +E Q+ +S F+P+T + M + H +ERE ++G+ VG S N E + + +PK KA+ K+F HG+SS Sbjct: 15 HLLVLSASWGMQCWMTFVAGFVLIKGVPRHTFGLVQSKLFPYYNHIVLCCSFISLAIYAAYHPRELLSPSESVQISLFFTSLLVAALQARWFSPVTTKTMFKMHVIEREHSLGQGVGLSANKEGYQLLQEKDPKYKALRKRFMRYHGISS 164
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_XENTR (Transmembrane protein 205 OS=Xenopus tropicalis OX=8364 GN=tmem205 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.239e-26 Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEVGWSKNVE----VAKSNPKLKAMNKKFGMIHGLSS 555 HLL S ++G W TF+ G ++ + +PRH FG +QSK+FP Y +V C IS+A + HP + S +E Q+ + F+P+T + M + H +ERE ++G+ VG S N E + + +PK KA+ ++F HG+SS Sbjct: 15 HLLVLSASWGMQCWTTFVAGFVLIRGVPRHTFGLVQSKLFPFYNHIVLCCSFISLAIYAAYHPRELLSPSESVQITLFFVCLLAAALHARWFSPVTTKTMFKMHIIEREHSLGQGVGLSANREAYQRLQEKDPKYKALRQRFMRYHGISS 164
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_HUMAN (Transmembrane protein 205 OS=Homo sapiens OX=9606 GN=TMEM205 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.629e-22 Identity = 56/155 (36.13%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEV-----GWSKNVEVAKSNPKLKAMNKKFGMIHGLSSLANI 567 HLL S A+G +WVTF+ G ++F++LPRH FG +QSK+FP YF + C I++ H W + E QL L S N P T M VE+E +G EV G ++ + +PK A+ + F HGLSSL N+ Sbjct: 15 HLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFINLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL 169
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_PONAB (Transmembrane protein 205 OS=Pongo abelii OX=9601 GN=TMEM205 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-22 Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEV-----GWSKNVEVAKSNPKLKAMNKKFGMIHGLSSLANI 567 HLL S A+G +WVTF+ G ++F++LPRH FG +QSK+FP YF + C +++ H W + E QL L S N P T M VE+E +G EV G ++ + +PK A+ + F HGLSSL N+ Sbjct: 15 HLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL 169
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_DANRE (Transmembrane protein 205 OS=Danio rerio OX=7955 GN=tmem205 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.883e-22 Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEVGWSKNVE----VAKSNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLA 609 HLL S +G +WV+FI G ++ + H FG +QSK+FP YF + A+S+A + HP + E Q+ + N F P E M ++E+E +G +VG S N E + + +PK K F HGLS+L N++ F + ++ YLA Sbjct: 15 HLLVISFTWGMQVWVSFIAGFVLISQVSMHTFGLVQSKLFPVYFYCLLGGNAVSLAVYAVYHPRELLDWHEGIQMSLFFVAVIMAGLNAQWFGPSATENMLVMQEIEKEHGLGNQVGMSSNREGYTKLREQDPKYKEHRSTFYRYHGLSNLCNLIGFFCITVNLIYLA 182
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_MOUSE (Transmembrane protein 205 OS=Mus musculus OX=10090 GN=Tmem205 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.375e-21 Identity = 56/155 (36.13%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEV-----GWSKNVEVAKSNPKLKAMNKKFGMIHGLSSLANI 567 HLL S A+G +WVTFI G ++F++LPRH FG +QSK+FP YF + C I++ W + E QL LL S N T +M+ +E+E +G EV G ++ +PK A+ +KF HGLSSL N+ Sbjct: 15 HLLVLSGAWGMQVWVTFISGFLLFRSLPRHTFGLVQSKVFPVYFHVSLGCAFINLCILAPQRAWIHLTLWEVSQLSLLLLSLTLATINARWLEARTTAVMRALQSIEKERGLGTEVPGNFQGPDPYRQLRDKDPKYSALRRKFYHYHGLSSLCNL 169
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: TM205_BOVIN (Transmembrane protein 205 OS=Bos taurus OX=9913 GN=TMEM205 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.261e-19 Identity = 55/155 (35.48%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 118 HLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEV-----GWSKNVEVAKSNPKLKAMNKKFGMIHGLSSLANI 567 HLL S A+G +WVTFI G ++F+ LPRH FG +QSK+FP YF + C +++ W + E QL LL S N T M VE+E +G EV G ++ +PK A+ ++F HGLSSL N+ Sbjct: 15 HLLVLSGAWGMQMWVTFISGFVLFRGLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQCSWAQLTFWEASQLFLLLLSLTLATINARWLESRTTAAMWALQTVEKERGLGGEVPGSHQGSDPYHQLRGQDPKYSALRQQFFRYHGLSSLCNL 169
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Match: YP098_YEAST (Uncharacterized mitochondrial outer membrane protein YPR098C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YPR098C PE=1 SV=2) HSP 1 Score: 56.225 bits (134), Expect = 8.423e-9 Identity = 48/166 (28.92%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 115 AHLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGACCAISVASFGYLHPWKTSSTTERYQLGFLLSSFAFNLTNLFVFTPMTIEMMKQRHKVERESNIGEEVGWSKNVEVAKSNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAG 612 AHLL +S FG + +++ I FK L + QF LQ+K+FP +F M A I P ++ L L+ + LTNLF P T ++ +QR + ++ G E+ K + K+FG HGLS L N+ + + + L+G Sbjct: 8 AHLLFYSFVFGGTTFYSYVASPIAFKVLEKDQFSALQNKIFPYFFQMQAASPVI----LALTAPIALTTG----PLSSLVVASVSGLTNLFWLLPWTHKVKEQRKNIAKKYT-GSEL-----------EAKDAILRKEFGKSHGLSLLFNLSNVCGMLAYGVCLSG 153 The following BLAST results are available for this feature:
BLAST of Phvul.007G215400.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 8
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.007G215400.1_Pv_G19833_v2.1 >Phvul.007G215400.1_Pv_G19833_v2.1 ID=Phvul.007G215400.1_Pv_G19833_v2.1; Name=Phvul.007G215400.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=209bpback to top mRNA from alignment at Chr07:33812360..33814634+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.007G215400.1_Pv_G19833_v2.1 ID=Phvul.007G215400.1_Pv_G19833_v2.1; Name=Phvul.007G215400.1; organism=Phaseolus vulgaris; type=mRNA; length=2275bp; location=Sequence derived from: Chr07:33812360..33814634+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr07:33812360..33814634+ >Phvul.007G215400.1_Pv_G19833_v2.1 ID=Phvul.007G215400.1_Pv_G19833_v2.1; Name=Phvul.007G215400.1; organism=Phaseolus vulgaris; type=CDS; length=627bp; location=Sequence derived from: Chr07:33812360..33814634+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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