Phvul.007G224700.2

Transcript Overview
NamePhvul.007G224700.2
Unique NamePhvul.007G224700.2_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07supercontigChr07:34825858..34829956 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL033Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvL119Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL237Pisum sativum Cameor genome v1aPisum sativum
pspvL241Pisum sativum Cameor genome v1aPisum sativum
pspvL647Pisum sativum Cameor genome v1aPisum sativum
pspvL673Pisum sativum Cameor genome v1aPisum sativum
pvvuR580Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR627Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0313Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0481Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL287Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL406Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL248Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL389Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0465Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0921Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0808Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1047Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1395Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL169Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL463Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR547Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR603Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR638Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR676Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR627Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR664Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR552Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR571Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR510Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR551Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR694Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR726Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL078Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL234Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL358Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL103Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL428Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL517Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL080Cicer arietinum
carpvL241Cicer arietinum
carpvL371Cicer arietinum
carpvL615Cicer arietinum
ccapvL147Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL322Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL400Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL497Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR643Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR716Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR665Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR723Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR672Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR691Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR676Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR692Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR535Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR570Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR535Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR578Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g144960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_07813.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun07g065300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_08G02150.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_04G02455.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-KK1_010194Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058884820.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun07g065300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan02g076400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.04G338500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014640841.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va02G019030.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.5g116800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
jg31860.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_02598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr01.1608.1.62113176Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.08G287900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun01g168000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr07.2169_Chr07.2170.1.62122c09Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_07849.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014658838.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004494070.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun01g168000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_00751Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.08G202200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va03G074050.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.04G218700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_05354.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat3g037040.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.001G185000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1001255Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr07.1421Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.007G224700Phvul.007G224700_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224700.2_Pv_G19833_v2.1Phvul.007G224700.2_Pv_G19833_v2.1Phaseolus vulgarispolypeptide
Phvul.007G224700.2Phvul.007G224700.2_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224700.2.v2.1.five_prime_UTR.1Phvul.007G224700.2.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224700.2.v2.1.CDS.1Phvul.007G224700.2.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224700.2.v2.1.CDS.2Phvul.007G224700.2.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G224700.2.v2.1.CDS.3Phvul.007G224700.2.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G224700.2.v2.1.three_prime_UTR.1Phvul.007G224700.2.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 469.929 bits (1208), Expect = 1.207e-167
Identity = 222/296 (75.00%), Postives = 258/296 (87.16%), Query Frame = 1
Query:    1 MGASLSSV--GANGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIP-SDLRERKRKCI 879
            MG+SLS++  G NG  +GPGLGDIPE CVACVF+YLTPPEICNLA LNRSFRGAASSDSVWE KLP NYQDLL L+PPER+ +LSKKDIFA+LSRP+PFD  +KEVW+DRVTGRVCM+ISAR M+ITGIEDRRYWNWIPTEESRFH VAYLQQIWWFEVDG V F  P  +Y+LSFR+HLGRF+KRLGRRVC++E THGWD+KPV+F LSTSDGQ+AS E  LD+   ++  G HKRGYWI+Y+VGEFIV+GSEP+T +++SMKQIDCTHSKGGLCVDSVFI P  D++E KRK +
Sbjct:    1 MGSSLSNLNDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTHGWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTEIQWSMKQIDCTHSKGGLCVDSVFINPIGDVKEHKRKAV 296          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 2.224e-106
Identity = 153/289 (52.94%), Postives = 201/289 (69.55%), Query Frame = 1
Query:   10 SLSSVGANGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSGSE-PTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRK 873
            S SS   + + + PGLGD+PE CVA +   L P EIC  ++LNR+FRGA+ +D VWESKLP+NY+D+L  +      NL K+ ++A LSR   FD   K+VW+D+ T  VC+SISA+ ++ITGI+DRRYW+ IPT+ESRF +VAYLQQIWWFEVDGE+ FPFP   Y++ FRL LGR  K  GRRVCN E  HGWDIKPV+F+L T DGQ +SS+C L E           RG WI Y  G+ +V  S   +T ++FSM QIDCTH+KGGL +DSV + PS  +++ ++
Sbjct:   13 SSSSCFGDRNILKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVHGWDIKPVRFQLWTEDGQYSSSQCMLTE-----------RGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDCTHTKGGLSLDSVVVYPSSCKDQLKR 290          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 4.518e-106
Identity = 151/267 (56.55%), Postives = 193/267 (72.28%), Query Frame = 1
Query:   55 LGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPE-RHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSD 852
            L D+PE CVA +   L PPEIC LARLNR FR A+S+D +WESKLP NY+ +   V  E     L KKD++A LS+P  FD G KE+W+D+ TGR+C+SIS++A+ ITGI+DRRYW+ IPT+ESRF + AY+QQIWWFEV GE    FP+  Y+L FR+ LG+ SKRLGRR+CN EH HGWDIKPV+F+L+TSD QQA S C          Y N+  G W  Y VG+F V+  + +T ++FSM QIDCTH+KGGLC+DSV I+P +
Sbjct:   25 LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIKPVRFQLATSDNQQAVSLC----------YLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCTHTKGGLCIDSVLILPKE 281          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.513e-96
Identity = 143/286 (50.00%), Postives = 196/286 (68.53%), Query Frame = 1
Query:   10 SLSSVGANGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVS-GSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRER 864
            +LSS   +   + PGLGD+PE CVA +   L P EIC  ++LN +F GA+ +D VWESKLP +Y+ +L  +      NL K+DIF  LSR   FD G+K+ W+D+ TG +C+  SA+ ++ITGI+DRRYW+ IP+++SRF +VAY+QQIWWF+VDGE+ FPFPA  Y++ FRL LG+  KR G +V + E  HGW+IKPV+F+LST DGQ +SS+C L E+           G W  Y  G+F+V      +T ++FSM QIDCTH+KGGLCVDSV + PS  ++R
Sbjct:   11 NLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEA-----------GNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYPSSCKDR 285          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 2.545e-90
Identity = 138/295 (46.78%), Postives = 190/295 (64.41%), Query Frame = 1
Query:    1 MGASLSSVGANGSTIGP--GLGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGN-------LSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLR 858
            MGA+ SS+  +    G   GL D+PE C+  +F+Y+ PPEIC LAR+N+SF  A+ SD+VWE KLP NY+ L+  +  ++            KK+I+A L RP  FD G KE WLD+ +G+V ++IS +AM ITGI+DRRYW  I ++ESRF ++ YL+QIWW E  G++ F F    Y+L F++ LG+  ++ GR+ C+ +  HGWDIKPV+F+LSTSDGQ A SE  LDES           G W+ +  G+F+V        V+FSM QIDCTH+KGGLC+D V I P + R
Sbjct:    1 MGAASSSIVRSEPFAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDES-----------GRWVYHHAGDFVVENQNSPVWVKFSMLQIDCTHTKGGLCLDCVIICPFEYR 284          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.071e-27
Identity = 68/268 (25.37%), Postives = 125/268 (46.64%), Query Frame = 1
Query:   67 PECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESV----IDDTYGNHKRGYWIDYKVGEFIVSGS-EPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDL 855
            PE C++ +  +  P + C  A ++++F     SD +WE  LP +Y+   +L+PP R  +  K+  F+L + P+ FD   K VWL++ +G+ C+ +SA  ++I   ++ +YW WIP  ESRF  VA L+ + WFE+ G        +   LS R     +    G   C     +G+    ++  +     + +    C  E++     +      +   W++ ++GEF   G       +  S  +    + K GL +  + I P+ +
Sbjct:   18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYE---SLIPPSRVFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGR------TNTRVLSPRTRYSAYIVFKGVDKC-----YGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKI 271          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.965e-25
Identity = 80/288 (27.78%), Postives = 134/288 (46.53%), Query Frame = 1
Query:   55 LGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDI-FALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSEC----CLDESVIDDTYGNHKRGY-----------WIDYKVGEFIVSG----SEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLR 858
            L D+PE CV+ +  + +P + C LA ++++F  A  SD VWE  +P  Y+ L++         LSKK++ FAL  + +  D G K +W+++   + C+ ISA  +AI      + W WIP  ++RF TVA L ++  FE+ G +     + + +   R       K+L   +C     +G++       +    GQ     C    C DE+ +D+ +    RG            W++ K+GEF   G     +    V    KQ    H K GL +  + I P+++R
Sbjct:   36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLIS--QSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRIN----SRVISPKTRYSAYIVYKKLN--IC-----YGFE-NVAVEVVVGVVGQDLEESCRRYICFDET-MDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQ---RHWKRGLIIQGIEIRPTNIR 305          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 7.540e-24
Identity = 56/156 (35.90%), Postives = 88/156 (56.41%), Query Frame = 1
Query:   22 VGANGSTI--GPGLGD-IPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSIS-ARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDG 477
            V ++G  I  GP L D +PE C++ +  + +P + C  A ++++F  A +SDSVW+  LP +Y    +LVPP R  +  K+  FA+   P+  + G K  WL++  G+ C  +S  ++M IT +   +YW WI   E+RF  V  L  + WFEV G
Sbjct:   33 VESSGGAIISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYS---SLVPPSRVFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRG 185          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.054e-23
Identity = 74/277 (26.71%), Postives = 127/277 (45.85%), Query Frame = 1
Query:   55 LGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVP--PERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPAD--IYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVI---DDTYGNH------KRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIP 846
            + ++PE C+A +    TP ++C L+ ++  FR AA SD VW   LP ++    A     P R     K+  F+L+  PL  +       L+R +G  C  ++ARA+ I    ++RYW+WI    +RF  VA L  +WW E+ G++     +D  +Y   F              V  + H+     +PV+  L  +D +  S++  +  S+I    D+ G        +R  W + ++G+F     +    +  S+K+    + K GL V  + I P
Sbjct:    1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLPTR-----KQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYF--------------VFKWNHSPYGFRQPVETSLVLADTE--STDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGD-LGEIEMSLKETKGPYEKKGLIVYGIEIRP 255          
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 9.045e-23
Identity = 75/286 (26.22%), Postives = 126/286 (44.06%), Query Frame = 1
Query:   28 ANGSTIGPGLGD---IPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCL---------DESVIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPS 849
            + G  + PG      +PE C++ +  + +P + C  A ++++F  A SSD VW+  LP  Y+   +LV   R     K+  FAL   P+  + G K  WL++ +G+ C+ +S++ + IT      YW WI   ESRF+ +A L  + WFE+ G+ +    A + +   R       K   R         G    PV+  L    GQ++S                   D T  + +   W++ ++GEF     E    + FS+ +I     K GL +  +   P+
Sbjct:   49 SGGEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYE---SLVSRSRVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTS----ARVLSPGTRYSAYIVFKTKDR-------CPGLGHLPVEVGLGLV-GQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFF--NEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPT 317          
The following BLAST results are available for this feature:
BLAST of Phvul.007G224700.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
P2A15_ARATH1.207e-16775.00F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3... [more]
P2A12_ARATH2.224e-10652.94F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3... [more]
P2A13_ARATH4.518e-10656.55F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3... [more]
P2A11_ARATH2.513e-9650.00F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3... [more]
P2A14_ARATH2.545e-9046.78F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3... [more]
P2B10_ARATH2.071e-2725.37F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3... [more]
PP2B8_ARATH1.965e-2527.78Putative F-box protein PP2-B8 OS=Arabidopsis thali... [more]
PP2B2_ARATH7.540e-2435.90Putative F-box protein PP2-B2 OS=Arabidopsis thali... [more]
P2B11_ARATH2.054e-2326.71F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3... [more]
FB95_ARATH9.045e-2326.22F-box protein At2g02240 OS=Arabidopsis thaliana OX... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 22..62
e-value: 0.0064
score: 25.7
IPR001810F-box domainPROSITEPS50181FBOXcoord: 16..62
score: 8.517
NoneNo IPR availableGENE3D1.20.1280.50coord: 18..112
e-value: 3.0E-5
score: 25.9
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 113..282
e-value: 5.5E-41
score: 140.0
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 17..89

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.007G224700.2_Pv_G19833_v2.1

>Phvul.007G224700.2_Pv_G19833_v2.1 ID=Phvul.007G224700.2_Pv_G19833_v2.1; Name=Phvul.007G224700.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=294bp
MGASLSSVGANGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRSFR
GAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHG
HKEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQ
QIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDI
KPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSG
SEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRKCI*
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mRNA from alignment at Chr07:34825858..34829956+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.007G224700.2_Pv_G19833_v2.1 ID=Phvul.007G224700.2_Pv_G19833_v2.1; Name=Phvul.007G224700.2; organism=Phaseolus vulgaris; type=mRNA; length=4099bp; location=Sequence derived from: Chr07:34825858..34829956+ (Phaseolus vulgaris
TACTTCACACACAGCACAACAAAAACAACACCAACGATAACTCCTGGAAC AATCCATGCAACAAAAACGGAAAAGGATCAATTAGTGTTCAGTTCCCCAC GCGCTTGCTTTCCCTCGCCGTGCTTCGTTTGGGCGCGTGCCATGAGGTGA GGACCCAGGAGGAGGAGGAGGAGCATGGGCGCGTCGCTGTCGAGCGTCGG CGCGAACGGTTCGACAATCGGTCCGGGCCTCGGCGACATTCCGGAGTGCT GCGTGGCGTGCGTGTTCCTCTACCTCACGCCGCCGGAGATTTGTAACCTC GCTCGCCTCAACCGCTCATTCCGCGGCGCCGCCTCCTCGGACTCAGTCTG GGAGTCCAAGCTGCCGCGCAACTACCAGGATCTGCTGGCTCTGGTCCCGC CAGAGCGCCACGGGAATCTCTCGAAGAAGGACATTTTCGCGCTCCTCTCA CGACCCCTGCCGTTCGACCACGGCCACAAGGTGGGTGGTGCTCTCCAGGT CAGTTTTTTTTGGTTATTTAGGGGTTTCTGGAACTTAGGTTTTTTGTTGA TGGTTTAGGTTTTTGCAGGAAGTGTGGCTGGACAGGGTCACTGGAAGGGT TTGCATGTCGATTTCGGCGAGGGCGATGGCGATTACTGGAATTGAGGACC GGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTAGATTTACTT GTCTTTAAAGCTGTATCACGAGAAAGAAGGATACACCGATGATAATGTGT TTCTTGTTTGATTCAAAAGAAAATGGAAAGAAAAGAGGAACGTTGACTTT AGAAACAAAATATTATGTGACTAAATTGACTATGTTCTGATATTGTAAAG CGATTTTACATAATTATCTAATCACAAATCACTTGTACAATTCATTGTCT TGTACAATGAACATATTTTGTATATAATCGAAATATTTTGTATATAATCG AAGTCTGTTTGTCTTGGCTTATTTTGTTTTTACTCTACCAAACATAAATT AGTTTTTTCCCTTTGCTTGGATATTTAAATCCTCTGATTTGGAGAGAGTT CTTTTGTGTGGATATTATCCCTCATTTTCACTCATTTTTTAAAGCCCCAA ACATTTGAGAAGTTCTAATTTTATCTTCCAACCATTTTCCTCCTTTTTCT TACTTGTCCTTGTAAAGCTTGATTTTTATAAAGAGCAGAGAGAGAACCAG GAATCAAATTAAGAAGAACTAAAACAGGTCCATTGGTTCGTTACAAACAA GGTATTTTAGACAGAGGAGGAAGTAACTACCCTTTACTGCTTTTTCTTTA CTGAATGTGATGGATCTCCTGACACAACATTTTCAGTTATTACATGATAG TTGTTTGTGAGTATATTGCACTCGTATACTCCTCCATAACTTGGAAACAC TGAAGAAATTATGTATTTTCTGATATTTCAAGTTAAAATGTTTGTGCACG TACTCACTCCCGTGGTTTCTTCAATTAAGCAGTGTAATGTAGTAAAACAT AATTGGTTGCACTGTTGCAGCCGTTTATTCACTTGGGTTAAACTTATTGT GGATTGTAAGGGCATGACATGATTCATTTTGGTGTTATTTGACATCATCT CTTGGACAATGACTGTAGTTATTGAAATTGTCTAATTCTTTGTATATTTA TGTGGGGCTTCAATCATGGATTTATAATAAATGGTAGATGTTTTGTTCGT ATAACTTCAACAGACTATGAGAAAAAAAGATAATATGTCATGATATGGGG TTTTGGCCTTGTAGATATATAAGTATAGGGAATTTATAGCTGTTGAGTAC GGGTACATACAAAAGAAATAGTAACAAAAATAACATCACCTTTTAACCGT TGCAAACTGGCAAAAACTGTTTTCCTTGAAATAATTTATTGTCCGTTCTT GACACAACTTCATAATCCATCTCTTCAGCTACCTAATTGACTAATAGGAG GATATGAGCTTTTGATTTCCATATACCTTTAATAAGTACTGTTGAATTAG GTACACATAAATCATAAGATGTTGAATCTTTCTTGGCATTTTCTCCATAT GAACTGACTATACTTTTATTTTATTATCTAAGCATTGATTGGGAATCCTA GATCATTGTCATTGATTCAAAGAATTCAACTATAACAATCAGAGATACTG ATTGTTGCTTATGTTAATACTGAACTTGAAGTTTGTTTCTTATATTAAAG TTACTTTTATTTCATCTTGAGCTTAACTGCCTTAAGAGTGCCCCTCTTAG TATAGAGTATAGCGAGGCTGTGCCTGGTACTATCATTCTCTTCACTAGAA CTGATGAAAATTGTATTTCTTATTCACCCTTGTTTCGAAGTTTAGCACAT AGTGTGATTGATAGTTGGACAGTCTGACTTATAAAGCTTTCTATTTGTGA AATATTCCATAATCTTGGTTTAAGATCCAAATGCACAGATTTGCATGTTA GTTTCATTGTTCTTGCATTGTATCTTGATAAATTTATCTTGTTCATTTTT TACTTGAGGAAATAGAGGAGAGAATGTTTCTGTGATGACTAATGCTAATG CATGAAGTTCAAGATTGTTTGTTAATTGTGTGTGTGGGTCATTGTACTGT TTACTTCCTGGGCTTTGTTTTTAAATCTTCAATGCCCCCATTTAAGAGAT ACAAAATCTTGTTGGCAATGGTGGTGTTAAATTGCGGGCGATGCTTGGTT TAATTTTTTATTTTAAACAATTACCAAAATGACTTTGAACAATTCATGGA ACTGTTTAAAGGAATCAAGCTGATCTTCATCTCAGAGCTAAACCAAATGA CATAGTTCTTTGATATGGGTTCTTTTAGTTAGCCTGTATCTACTGTTAAG CTCATTTCAATTGTATGAACAACTTGACAACAGTATTACTTTGTTCTCTT GCAAATAAATTATGTAGCTAAATGTTTACATTCTATATACAAAAGCTGCG TCAATATTTGAAAGAAAACATTTCACAACGTTTTATATTCATAATTCATT AAATGTAAAATAAAATAAAATTGAACAGTACAACATATATGCAAGCCTTA ATCTGGATGAGGGAAATATTCAAATATTTGTGACTTGGAATGATGTTTTT TAAGTATTGATTGCAATTTGGTTCCGAATAGATTCATTGACATCAAATGT GCAACCTTGAATAGATTCATTGACATCAAATGTGCAACCTTGAACACGAC TGATCCTTGAAATGCTCAACCTGATTGAACCTACTCATTCTATTAAAAAT ATAGTGGAGGTTGGTTTGCGCGTAACATACGAACATTTTAATTCTCCTTG TCACACTTAGATACGTCAACTTACTACTCATTCTGTTTGCATTCCTTTTT GCAAACTGTAGCTCTTGCAAATCTCGATGAAAAGTTGTTTTGTTCTCCAT TTGTTCTTGTAATCTGTCAGCATTCTGTTACACCCTAGATGATTTTCAGG TTTCACACGGTGGCTTATTTGCAGCAAATATGGTGGTTTGAAGTGGATGG AGAGGTGACGTTTCCATTTCCCGCTGATATTTATACTCTCTCCTTTAGGC TTCACCTTGGACGGTTTTCCAAAAGACTTGGACGGCGTGTTTGTAATTAT GAACACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTGTCTAC TTCAGATGGTCAGCAAGCATCATCTGAATGCTGTTTGGATGAAAGTGTGA TTGATGATACATATGGAAATCATAAGCGAGGATACTGGATAGATTATAAG GTGGGTGAGTTTATTGTCAGTGGATCAGAGCCCACAACTCATGTTAGATT TTCCATGAAACAGATTGATTGTACACATTCCAAAGGTGGCCTTTGTGTAG ATTCTGTATTTATTATACCAAGTGATTTGAGAGAGCGCAAGAGAAAATGC ATTTGAAATATAGGAAGCTTGTTTCTTTCAGTGATGTCAAACACCCAGAA TACACTATTGGGATCTATCACAGCTCATACTAAACCAAAAAAAGTTTACA ATTTGGAGAAAGTATTTTTTCTGGTTTTTTATTATTTTTTTGGCCAGTGG TGTGTATATCCTTTTTATCTGTGTAATAATAATTTCTATTCAATGTAAT
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Coding sequence (CDS) from alignment at Chr07:34825858..34829956+

>Phvul.007G224700.2_Pv_G19833_v2.1 ID=Phvul.007G224700.2_Pv_G19833_v2.1; Name=Phvul.007G224700.2; organism=Phaseolus vulgaris; type=CDS; length=882bp; location=Sequence derived from: Chr07:34825858..34829956+ (Phaseolus vulgaris
ATGGGCGCGTCGCTGTCGAGCGTCGGCGCGAACGGTTCGACAATCGGTCC
GGGCCTCGGCGACATTCCGGAGTGCTGCGTGGCGTGCGTGTTCCTCTACC
TCACGCCGCCGGAGATTTGTAACCTCGCTCGCCTCAACCGCTCATTCCGC
GGCGCCGCCTCCTCGGACTCAGTCTGGGAGTCCAAGCTGCCGCGCAACTA
CCAGGATCTGCTGGCTCTGGTCCCGCCAGAGCGCCACGGGAATCTCTCGA
AGAAGGACATTTTCGCGCTCCTCTCACGACCCCTGCCGTTCGACCACGGC
CACAAGGAAGTGTGGCTGGACAGGGTCACTGGAAGGGTTTGCATGTCGAT
TTCGGCGAGGGCGATGGCGATTACTGGAATTGAGGACCGGAGATACTGGA
ATTGGATTCCTACTGAAGAATCTAGGTTTCACACGGTGGCTTATTTGCAG
CAAATATGGTGGTTTGAAGTGGATGGAGAGGTGACGTTTCCATTTCCCGC
TGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGGTTTTCCAAAA
GACTTGGACGGCGTGTTTGTAATTATGAACACACCCATGGTTGGGATATA
AAACCTGTGAAATTTGAGTTGTCTACTTCAGATGGTCAGCAAGCATCATC
TGAATGCTGTTTGGATGAAAGTGTGATTGATGATACATATGGAAATCATA
AGCGAGGATACTGGATAGATTATAAGGTGGGTGAGTTTATTGTCAGTGGA
TCAGAGCCCACAACTCATGTTAGATTTTCCATGAAACAGATTGATTGTAC
ACATTCCAAAGGTGGCCTTTGTGTAGATTCTGTATTTATTATACCAAGTG
ATTTGAGAGAGCGCAAGAGAAAATGCATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR025886PP2-like
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding